sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J01-A2710-A2754
X
>2J03-A2710-A2754
X
>3F1H-A2817-A2861
X
>3F1F-A2817-A2861
X
>2ZJR-X695-X666
X
>3OH5-A2663-A2707
X
>1GTR-B11-B7
X
>3OHZ-A2663-A2707
X
>3OI1-A2663-A2707
X
>3OHK-A2663-A2707
X
>3OHJ-A2663-A2707
X
</seq>
<hsp>
0 1:0.00760336774311
0 2:0.135512404375
0 3:0.133468386347
0 4:0.935699925398
0 5:0.0823446012912
0 6:0.794376382349
0 7:0.0736890413569
0 8:0.0772752553955
0 9:0.0907457984558
0 10:0.0908986254336
1 2:0.135200334914
1 3:0.133098034271
1 4:0.937065963074
1 5:0.082100061948
1 6:0.797103909039
1 7:0.0745342312617
1 8:0.0785368796027
1 9:0.0928472909211
1 10:0.0927235559152
2 3:0.00590818129856
2 4:0.999998353185
2 5:0.0939989649799
2 6:0.905095515782
2 7:0.0936858448678
2 8:0.0908628983702
2 9:0.0844986790193
2 10:0.0801095310718
3 4:0.997476732339
3 5:0.0920468505237
3 6:0.904593264639
3 7:0.0916436378662
3 8:0.0888254711608
3 9:0.0826649396467
3 10:0.0786773543107
4 5:0.948225060167
4 6:0.863968701133
4 7:0.942117131474
4 8:0.943565763883
4 9:0.949403560037
4 10:0.956940889123
5 6:0.830412409635
5 7:0.0437227118685
5 8:0.0458707433517
5 9:0.0659475244371
5 10:0.0666482150947
6 7:0.83022455095
6 8:0.833678223141
6 9:0.848858379926
6 10:0.85071787655
7 8:0.0103195240101
7 9:0.0370977818588
7 10:0.0402693274849
8 9:0.0304459834221
8 10:0.03584819879
9 10:0.0157439546347
</hsp>