sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A317-A324
X
>3U5D-12317-12328
X
>1YJN-02286-0410
X
>3CCS-01897-01856
X
>3CCJ-02386-02454
X
>3I56-02563-02597
X
>1FFK-02339-02407
X
</seq>
<hsp>
0 1:0.31943182103
0 2:0.916334491385
0 3:0.389531012675
0 4:0.731001580815
0 5:0.381688526301
0 6:0.727092844374
1 2:1.0
1 3:0.370229770228
1 4:0.725319081594
1 5:0.388711597206
1 6:0.786879909874
2 3:0.780460191703
2 4:0.350520079368
2 5:0.728797934697
2 6:0.356903232516
3 4:0.54469117791
3 5:0.110584312327
3 6:0.517026655367
4 5:0.502580040189
4 6:0.286356800146
5 6:0.48962247638
</hsp>