sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJ9-01765-01743
X
>3KNI-A834-A839
X
>3OH5-A1382-A1501
X
>2J03-A1654-A1670
X
>1YJW-0720-0725
X
>3R8O-A1483-A1413
X
>3OHY-A239-A265
X
</seq>
<hsp>
0 1:0.361153616281
0 2:0.481439929271
0 3:0.738334184255
0 4:1.0
0 5:0.489688375283
0 6:0.764858432789
1 2:0.536158331679
1 3:0.683951637805
1 4:0.785536240016
1 5:0.580878596489
1 6:0.615632302619
2 3:0.502296352396
2 4:0.91570859775
2 5:0.666215790098
2 6:0.56799691957
3 4:0.942640041498
3 5:0.959092490373
3 6:0.412461401936
4 5:0.858499326271
4 6:0.719992005953
5 6:0.80468851753
</hsp>