sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHK-A1222-A1918
X
>3OH7-A1222-A1918
X
>3OH5-A1222-A1918
X
>3U5D-111-4135
X
>3U5H-51672-51612
X
>3KNK-A1227-A1917
X
</seq>
<hsp>
0 1:0.3577740343
0 2:0.336418621614
0 3:0.798296877608
0 4:0.781585624726
0 5:0.740379705608
1 2:0.0606672955222
1 3:0.934570442111
1 4:0.674727435506
1 5:0.858456957046
2 3:0.928507514201
2 4:0.673587548537
2 5:0.849886033526
3 4:0.999988931483
3 5:0.978528382387
4 5:0.549667396232
</hsp>