sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FFY-T33-T36
X
>1QU2-T33-T36
X
>2UUB-A213-A171
X
>1XMQ-A213-A171
X
>2UXC-A213-A171
X
>2UUA-A213-A171
X
>1N32-A213-A171
X
>2VQE-A213-A171
X
>2VQF-A213-A171
X
</seq>
<hsp>
0 1:2.44069262851e-06
0 2:0.773944446053
0 3:0.889976541846
0 4:0.94041032152
0 5:0.937460645647
0 6:1.0
0 7:0.885710841956
0 8:0.828440420991
1 2:0.773944446053
1 3:0.889976541846
1 4:0.94041032152
1 5:0.937460645647
1 6:1.0
1 7:0.885710841956
1 8:0.828440420991
2 3:0.211090127081
2 4:0.264294245971
2 5:0.380935264973
2 6:0.375859097257
2 7:0.426842163047
2 8:0.367583408085
3 4:0.176778733326
3 5:0.248878447757
3 6:0.239286993675
3 7:0.349235160841
3 8:0.310229785558
4 5:0.204631927789
4 6:0.144623437744
4 7:0.299792543185
4 8:0.272641710292
5 6:0.21521389558
5 7:0.270969169284
5 8:0.253768587453
6 7:0.245376839406
6 8:0.245195373495
7 8:0.0853201450018
</hsp>