sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61595-61167
X
>2ZJR-X1168-X494
X
>3R8N-A1515-A1494
X
>3U5F-61478-61585
X
>3U5D-1418-12190
X
>3U5F-61498-61543
X
>3R8S-A249-A200
X
>3FTM-B7-D10
X
>3R8T-A249-A200
X
>3U5B-21486-21531
X
>1NTB-A11-B8
X
>2J01-A231-A182
X
>2J03-A231-A182
X
>1EC6-C9-C6
X
>3U5F-6414-6411
X
>3KNH-A109-A173
X
</seq>
<hsp>
0 1:0.341787917965
0 2:0.718164267018
0 3:0.666136674687
0 4:0.704174787052
0 5:0.459867289128
0 6:0.97204018677
0 7:0.799040126231
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0 9:0.42015088635
0 10:0.673625902431
0 11:0.952288480857
0 12:0.949705013889
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0 14:0.821835996419
0 15:0.65373805123
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1 4:0.638458927419
1 5:0.491627230489
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1 9:0.517114806951
1 10:0.586342168734
1 11:0.846440592104
1 12:0.8460478308
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1 14:0.725253059705
1 15:0.649360322372
2 3:0.502360487184
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3 4:0.903117864509
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3 6:0.704589166159
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3 8:0.735388822398
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3 12:0.717724494417
3 13:0.794196538838
3 14:0.807831574307
3 15:0.536395783781
4 5:0.747710152976
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7 11:0.415552358651
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8 9:0.791838721195
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8 11:0.0828286651755
8 12:0.083585830296
8 13:0.384743901223
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8 15:0.427365579981
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10 11:0.481721773315
10 12:0.480507944494
10 13:0.243340013957
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10 15:0.394620923686
11 12:0.0123580318854
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11 14:0.333969939403
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12 13:0.334207171032
12 14:0.33235181641
12 15:0.378994590208
13 14:0.205629554396
13 15:0.370891969397
14 15:0.346295630291
</hsp>