sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2HO6-B105-B15
X
>2H0S-B105-B15
X
>2HO7-B105-B15
X
>2GCV-B105-B15
X
>3B4C-B104-B15
X
>3B4A-B104-B15
X
>2H0W-B105-B15
X
>3B4B-B105-B15
X
>2H0Z-B105-B15
X
>2GCS-B105-B15
X
>2H0X-B105-B15
X
</seq>
<hsp>
0 1:0.756176299368
0 2:0.215435957425
0 3:0.564293538161
0 4:0.876182265225
0 5:0.926962288972
0 6:0.559115162824
0 7:0.489861002292
0 8:0.77221874935
0 9:0.730672993429
0 10:0.663434245613
1 2:0.628432767802
1 3:0.724527805165
1 4:0.927708259049
1 5:1.0
1 6:0.719795081741
1 7:0.632502476194
1 8:0.729198549524
1 9:0.751425236711
1 10:0.609072739868
2 3:0.625036428048
2 4:0.856015533974
2 5:0.92782871427
2 6:0.604945475941
2 7:0.441132314533
2 8:0.694795769335
2 9:0.682602870486
2 10:0.593535389511
3 4:0.76113868355
3 5:0.683251416401
3 6:0.228903553294
3 7:0.534252998876
3 8:0.752947190426
3 9:0.598902307358
3 10:0.541486603442
4 5:0.464125697139
4 6:0.640933744316
4 7:0.74720998022
4 8:0.378206306598
4 9:0.416675924662
4 10:0.495161782559
5 6:0.537076654932
5 7:0.676720260873
5 8:0.485210922019
5 9:0.367586834022
5 10:0.461389100233
6 7:0.390103999373
6 8:0.605321415069
6 9:0.436506325708
6 10:0.407472886479
7 8:0.526427103216
7 9:0.426573857872
7 10:0.356809877298
8 9:0.272980512953
8 10:0.288356609189
9 10:0.158147523789
</hsp>