Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01086:01018
Extra
PDB:
ATOM 1 O3' C A1085 45.859 99.581 112.154 1.00 48.41 O
ATOM 2 P C A1086 47.238 99.472 111.330 1.00 48.51 P
ATOM 3 OP1 C A1086 47.005 100.072 109.991 1.00 49.45 O
ATOM 4 OP2 C A1086 47.771 98.086 111.426 1.00 47.63 O
ATOM 5 O5' C A1086 48.195 100.463 112.122 1.00 48.84 O
ATOM 6 C5' C A1086 49.460 100.037 112.627 1.00 46.71 C
ATOM 7 C4' C A1086 50.247 101.237 113.066 1.00 46.33 C
ATOM 8 O4' C A1086 50.449 102.097 111.920 1.00 44.48 O
ATOM 9 C3' C A1086 49.546 102.117 114.087 1.00 45.84 C
ATOM 10 O3' C A1086 49.827 101.651 115.404 1.00 46.85 O
ATOM 11 C2' C A1086 50.197 103.471 113.845 1.00 45.53 C
ATOM 12 O2' C A1086 51.482 103.545 114.421 1.00 48.35 O
ATOM 13 C1' C A1086 50.393 103.451 112.329 1.00 44.85 C
ATOM 14 N1 C A1086 49.366 104.150 111.527 1.00 44.59 N
ATOM 15 C2 C A1086 49.200 105.544 111.675 1.00 42.68 C
ATOM 16 O2 C A1086 49.858 106.150 112.533 1.00 41.62 O
ATOM 17 N3 C A1086 48.323 106.186 110.879 1.00 42.05 N
ATOM 18 C4 C A1086 47.621 105.504 109.974 1.00 42.98 C
ATOM 19 N4 C A1086 46.791 106.188 109.179 1.00 43.59 N
ATOM 20 C5 C A1086 47.740 104.093 109.833 1.00 42.86 C
ATOM 21 C6 C A1086 48.606 103.462 110.624 1.00 42.42 C
ATOM 22 P U A1087 48.632 101.382 116.440 1.00 47.27 P
ATOM 23 OP1 U A1087 49.207 101.395 117.803 1.00 47.07 O
ATOM 24 OP2 U A1087 47.907 100.178 115.959 1.00 46.84 O
ATOM 25 O5' U A1087 47.692 102.654 116.304 1.00 46.78 O
TER
ATOM 1 O3' A B1017 54.732 99.055 110.361 1.00 43.47 O
ATOM 2 P G B1018 53.477 98.167 110.830 1.00 45.68 P
ATOM 3 OP1 G B1018 53.036 98.708 112.152 1.00 41.94 O
ATOM 4 OP2 G B1018 53.825 96.725 110.701 1.00 44.19 O
ATOM 5 O5' G B1018 52.365 98.493 109.739 1.00 43.02 O
ATOM 6 C5' G B1018 51.789 99.804 109.663 1.00 40.51 C
ATOM 7 C4' G B1018 51.915 100.342 108.265 1.00 37.48 C
ATOM 8 O4' G B1018 51.341 101.677 108.245 1.00 33.87 O
ATOM 9 C3' G B1018 53.345 100.481 107.745 1.00 36.12 C
ATOM 10 O3' G B1018 53.352 100.320 106.327 1.00 36.21 O
ATOM 11 C2' G B1018 53.657 101.934 108.069 1.00 36.92 C
ATOM 12 O2' G B1018 54.644 102.434 107.201 1.00 41.34 O
ATOM 13 C1' G B1018 52.306 102.586 107.785 1.00 36.30 C
ATOM 14 N9 G B1018 52.033 103.893 108.375 1.00 36.61 N
ATOM 15 C8 G B1018 52.693 104.519 109.399 1.00 37.49 C
ATOM 16 N7 G B1018 52.207 105.700 109.677 1.00 36.37 N
ATOM 17 C5 G B1018 51.164 105.859 108.786 1.00 37.15 C
ATOM 18 C6 G B1018 50.276 106.940 108.606 1.00 39.72 C
ATOM 19 O6 G B1018 50.224 108.006 109.226 1.00 41.28 O
ATOM 20 N1 G B1018 49.374 106.694 107.577 1.00 40.69 N
ATOM 21 C2 G B1018 49.337 105.555 106.819 1.00 41.36 C
ATOM 22 N2 G B1018 48.419 105.525 105.849 1.00 44.93 N
ATOM 23 N3 G B1018 50.149 104.528 106.990 1.00 40.28 N
ATOM 24 C4 G B1018 51.037 104.751 107.980 1.00 38.51 C
ATOM 25 P C B1019 54.176 99.117 105.645 1.00 40.32 P
ATOM 26 OP1 C B1019 53.741 99.019 104.234 1.00 40.99 O
ATOM 27 OP2 C B1019 54.088 97.911 106.507 1.00 40.97 O
ATOM 28 O5' C B1019 55.675 99.657 105.602 1.00 39.19 O
TER
ATOM 2 P C A1086 47.238 99.472 111.330 1.00 48.51 P
ATOM 3 OP1 C A1086 47.005 100.072 109.991 1.00 49.45 O
ATOM 4 OP2 C A1086 47.771 98.086 111.426 1.00 47.63 O
ATOM 5 O5' C A1086 48.195 100.463 112.122 1.00 48.84 O
ATOM 6 C5' C A1086 49.460 100.037 112.627 1.00 46.71 C
ATOM 7 C4' C A1086 50.247 101.237 113.066 1.00 46.33 C
ATOM 8 O4' C A1086 50.449 102.097 111.920 1.00 44.48 O
ATOM 9 C3' C A1086 49.546 102.117 114.087 1.00 45.84 C
ATOM 10 O3' C A1086 49.827 101.651 115.404 1.00 46.85 O
ATOM 11 C2' C A1086 50.197 103.471 113.845 1.00 45.53 C
ATOM 12 O2' C A1086 51.482 103.545 114.421 1.00 48.35 O
ATOM 13 C1' C A1086 50.393 103.451 112.329 1.00 44.85 C
ATOM 14 N1 C A1086 49.366 104.150 111.527 1.00 44.59 N
ATOM 15 C2 C A1086 49.200 105.544 111.675 1.00 42.68 C
ATOM 16 O2 C A1086 49.858 106.150 112.533 1.00 41.62 O
ATOM 17 N3 C A1086 48.323 106.186 110.879 1.00 42.05 N
ATOM 18 C4 C A1086 47.621 105.504 109.974 1.00 42.98 C
ATOM 19 N4 C A1086 46.791 106.188 109.179 1.00 43.59 N
ATOM 20 C5 C A1086 47.740 104.093 109.833 1.00 42.86 C
ATOM 21 C6 C A1086 48.606 103.462 110.624 1.00 42.42 C
ATOM 22 P U A1087 48.632 101.382 116.440 1.00 47.27 P
ATOM 23 OP1 U A1087 49.207 101.395 117.803 1.00 47.07 O
ATOM 24 OP2 U A1087 47.907 100.178 115.959 1.00 46.84 O
ATOM 25 O5' U A1087 47.692 102.654 116.304 1.00 46.78 O
TER
ATOM 1 O3' A B1017 54.732 99.055 110.361 1.00 43.47 O
ATOM 2 P G B1018 53.477 98.167 110.830 1.00 45.68 P
ATOM 3 OP1 G B1018 53.036 98.708 112.152 1.00 41.94 O
ATOM 4 OP2 G B1018 53.825 96.725 110.701 1.00 44.19 O
ATOM 5 O5' G B1018 52.365 98.493 109.739 1.00 43.02 O
ATOM 6 C5' G B1018 51.789 99.804 109.663 1.00 40.51 C
ATOM 7 C4' G B1018 51.915 100.342 108.265 1.00 37.48 C
ATOM 8 O4' G B1018 51.341 101.677 108.245 1.00 33.87 O
ATOM 9 C3' G B1018 53.345 100.481 107.745 1.00 36.12 C
ATOM 10 O3' G B1018 53.352 100.320 106.327 1.00 36.21 O
ATOM 11 C2' G B1018 53.657 101.934 108.069 1.00 36.92 C
ATOM 12 O2' G B1018 54.644 102.434 107.201 1.00 41.34 O
ATOM 13 C1' G B1018 52.306 102.586 107.785 1.00 36.30 C
ATOM 14 N9 G B1018 52.033 103.893 108.375 1.00 36.61 N
ATOM 15 C8 G B1018 52.693 104.519 109.399 1.00 37.49 C
ATOM 16 N7 G B1018 52.207 105.700 109.677 1.00 36.37 N
ATOM 17 C5 G B1018 51.164 105.859 108.786 1.00 37.15 C
ATOM 18 C6 G B1018 50.276 106.940 108.606 1.00 39.72 C
ATOM 19 O6 G B1018 50.224 108.006 109.226 1.00 41.28 O
ATOM 20 N1 G B1018 49.374 106.694 107.577 1.00 40.69 N
ATOM 21 C2 G B1018 49.337 105.555 106.819 1.00 41.36 C
ATOM 22 N2 G B1018 48.419 105.525 105.849 1.00 44.93 N
ATOM 23 N3 G B1018 50.149 104.528 106.990 1.00 40.28 N
ATOM 24 C4 G B1018 51.037 104.751 107.980 1.00 38.51 C
ATOM 25 P C B1019 54.176 99.117 105.645 1.00 40.32 P
ATOM 26 OP1 C B1019 53.741 99.019 104.234 1.00 40.99 O
ATOM 27 OP2 C B1019 54.088 97.911 106.507 1.00 40.97 O
ATOM 28 O5' C B1019 55.675 99.657 105.602 1.00 39.19 O
TER
Atoms:
C2: (49.200,105.544,111.675)
OP1: (47.005,100.072,109.991)
OP2: (47.771,98.086,111.426)
C4: (47.621,105.504,109.974)
O5': (48.195,100.463,112.122)
C3': (49.546,102.117,114.087)
C1': (50.393,103.451,112.329)
O4': (50.449,102.097,111.920)
C5': (49.460,100.037,112.627)
P: (47.238,99.472,111.330)
O2: (49.858,106.150,112.533)
C4': (50.247,101.237,113.066)
C2': (50.197,103.471,113.845)
O2': (51.482,103.545,114.421)
N1: (49.366,104.150,111.527)
N3: (48.323,106.186,110.879)
N4: (46.791,106.188,109.179)
C6: (48.606,103.462,110.624)
C5: (47.740,104.093,109.833)
O3': (49.827,101.651,115.404)
OP1: (47.005,100.072,109.991)
OP2: (47.771,98.086,111.426)
C4: (47.621,105.504,109.974)
O5': (48.195,100.463,112.122)
C3': (49.546,102.117,114.087)
C1': (50.393,103.451,112.329)
O4': (50.449,102.097,111.920)
C5': (49.460,100.037,112.627)
P: (47.238,99.472,111.330)
O2: (49.858,106.150,112.533)
C4': (50.247,101.237,113.066)
C2': (50.197,103.471,113.845)
O2': (51.482,103.545,114.421)
N1: (49.366,104.150,111.527)
N3: (48.323,106.186,110.879)
N4: (46.791,106.188,109.179)
C6: (48.606,103.462,110.624)
C5: (47.740,104.093,109.833)
O3': (49.827,101.651,115.404)
OP1: (53.036,98.708,112.152)
OP2: (53.825,96.725,110.701)
C3': (53.345,100.481,107.745)
C1': (52.306,102.586,107.785)
C5': (51.789,99.804,109.663)
O6: (50.224,108.006,109.226)
O4': (51.341,101.677,108.245)
C8: (52.693,104.519,109.399)
C2: (49.337,105.555,106.819)
C6: (50.276,106.940,108.606)
C5: (51.164,105.859,108.786)
C4: (51.037,104.751,107.980)
P: (53.477,98.167,110.830)
C4': (51.915,100.342,108.265)
C2': (53.657,101.934,108.069)
O2': (54.644,102.434,107.201)
N1: (49.374,106.694,107.577)
N2: (48.419,105.525,105.849)
N3: (50.149,104.528,106.990)
N7: (52.207,105.700,109.677)
N9: (52.033,103.893,108.375)
O5': (52.365,98.493,109.739)
O3': (53.352,100.320,106.327)
OP2: (53.825,96.725,110.701)
C3': (53.345,100.481,107.745)
C1': (52.306,102.586,107.785)
C5': (51.789,99.804,109.663)
O6: (50.224,108.006,109.226)
O4': (51.341,101.677,108.245)
C8: (52.693,104.519,109.399)
C2: (49.337,105.555,106.819)
C6: (50.276,106.940,108.606)
C5: (51.164,105.859,108.786)
C4: (51.037,104.751,107.980)
P: (53.477,98.167,110.830)
C4': (51.915,100.342,108.265)
C2': (53.657,101.934,108.069)
O2': (54.644,102.434,107.201)
N1: (49.374,106.694,107.577)
N2: (48.419,105.525,105.849)
N3: (50.149,104.528,106.990)
N7: (52.207,105.700,109.677)
N9: (52.033,103.893,108.375)
O5': (52.365,98.493,109.739)
O3': (53.352,100.320,106.327)
Image (generated by PyMOL):