ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01197:01199

Extra

PDB:
ATOM 1 O3' U A1196 39.500 111.650 126.400 1.00 43.23 O
ATOM 2 P C A1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 3 OP1 C A1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 4 OP2 C A1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 5 O5' C A1197 38.394 110.101 124.794 1.00 42.33 O
ATOM 6 C5' C A1197 38.303 109.028 123.852 1.00 38.55 C
ATOM 7 C4' C A1197 36.977 108.314 123.982 1.00 37.31 C
ATOM 8 O4' C A1197 36.256 108.762 125.162 1.00 36.36 O
ATOM 9 C3' C A1197 35.969 108.585 122.884 1.00 37.21 C
ATOM 10 O3' C A1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 11 C2' C A1197 34.684 108.060 123.523 1.00 36.06 C
ATOM 12 O2' C A1197 34.565 106.649 123.484 1.00 35.53 O
ATOM 13 C1' C A1197 34.872 108.486 124.984 1.00 34.75 C
ATOM 14 N1 C A1197 34.068 109.678 125.331 1.00 32.90 N
ATOM 15 C2 C A1197 32.684 109.532 125.433 1.00 29.71 C
ATOM 16 O2 C A1197 32.190 108.414 125.275 1.00 31.42 O
ATOM 17 N3 C A1197 31.920 110.607 125.699 1.00 30.51 N
ATOM 18 C4 C A1197 32.487 111.799 125.872 1.00 31.71 C
ATOM 19 N4 C A1197 31.682 112.842 126.113 1.00 32.45 N
ATOM 20 C5 C A1197 33.900 111.979 125.802 1.00 29.60 C
ATOM 21 C6 C A1197 34.646 110.902 125.533 1.00 30.61 C
ATOM 22 P G A1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 23 OP1 G A1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 24 OP2 G A1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 25 O5' G A1198 35.936 109.848 120.161 1.00 34.87 O
TER

ATOM 1 O3' G B1198 34.788 112.665 120.661 1.00 35.24 O
ATOM 2 P G B1199 34.548 112.693 122.248 1.00 38.16 P
ATOM 3 OP1 G B1199 35.869 112.971 122.859 1.00 36.65 O
ATOM 4 OP2 G B1199 33.789 111.468 122.650 1.00 35.54 O
ATOM 5 O5' G B1199 33.619 113.963 122.471 1.00 33.43 O
ATOM 6 C5' G B1199 34.119 115.275 122.208 1.00 33.87 C
ATOM 7 C4' G B1199 32.995 116.269 122.248 1.00 34.70 C
ATOM 8 O4' G B1199 31.999 115.887 121.266 1.00 37.41 O
ATOM 9 C3' G B1199 32.219 116.314 123.548 1.00 34.70 C
ATOM 10 O3' G B1199 32.871 117.113 124.525 1.00 36.27 O
ATOM 11 C2' G B1199 30.898 116.901 123.089 1.00 35.12 C
ATOM 12 O2' G B1199 31.015 118.286 122.821 1.00 35.24 O
ATOM 13 C1' G B1199 30.699 116.143 121.776 1.00 35.62 C
ATOM 14 N9 G B1199 30.035 114.856 121.978 1.00 35.49 N
ATOM 15 C8 G B1199 30.607 113.609 121.918 1.00 33.88 C
ATOM 16 N7 G B1199 29.766 112.648 122.185 1.00 36.11 N
ATOM 17 C5 G B1199 28.565 113.297 122.431 1.00 34.27 C
ATOM 18 C6 G B1199 27.299 112.779 122.791 1.00 35.64 C
ATOM 19 O6 G B1199 26.972 111.602 122.978 1.00 36.55 O
ATOM 20 N1 G B1199 26.356 113.791 122.941 1.00 35.20 N
ATOM 21 C2 G B1199 26.602 115.127 122.771 1.00 34.02 C
ATOM 22 N2 G B1199 25.568 115.956 122.960 1.00 32.63 N
ATOM 23 N3 G B1199 27.778 115.620 122.440 1.00 36.53 N
ATOM 24 C4 G B1199 28.709 114.657 122.291 1.00 35.01 C
ATOM 25 P G B1200 32.614 116.826 126.082 1.00 32.47 P
ATOM 26 OP1 G B1200 33.395 117.822 126.855 1.00 34.14 O
ATOM 27 OP2 G B1200 32.817 115.382 126.332 1.00 30.72 O
ATOM 28 O5' G B1200 31.069 117.162 126.273 1.00 34.84 O
TER

Atoms:
C2: (32.684,109.532,125.433)
OP1: (39.191,109.281,127.018)
OP2: (40.862,109.918,125.185)
C4: (32.487,111.799,125.872)
O5': (38.394,110.101,124.794)
C3': (35.969,108.585,122.884)
C1': (34.872,108.486,124.984)
O4': (36.256,108.762,125.162)
C5': (38.303,109.028,123.852)
P: (39.567,110.142,125.873)
O2: (32.190,108.414,125.275)
C4': (36.977,108.314,123.982)
C2': (34.684,108.060,123.523)
O2': (34.565,106.649,123.484)
N1: (34.068,109.678,125.331)
N3: (31.920,110.607,125.699)
N4: (31.682,112.842,126.113)
C6: (34.646,110.902,125.533)
C5: (33.900,111.979,125.802)
O3': (36.288,107.847,121.709)
OP1: (35.869,112.971,122.859)
OP2: (33.789,111.468,122.650)
C3': (32.219,116.314,123.548)
C1': (30.699,116.143,121.776)
C5': (34.119,115.275,122.208)
O6: (26.972,111.602,122.978)
O4': (31.999,115.887,121.266)
C8: (30.607,113.609,121.918)
C2: (26.602,115.127,122.771)
C6: (27.299,112.779,122.791)
C5: (28.565,113.297,122.431)
C4: (28.709,114.657,122.291)
P: (34.548,112.693,122.248)
C4': (32.995,116.269,122.248)
C2': (30.898,116.901,123.089)
O2': (31.015,118.286,122.821)
N1: (26.356,113.791,122.941)
N2: (25.568,115.956,122.960)
N3: (27.778,115.620,122.440)
N7: (29.766,112.648,122.185)
N9: (30.035,114.856,121.978)
O5': (33.619,113.963,122.471)
O3': (32.871,117.113,124.525)
Image (generated by PyMOL):
PyMOL image
show in jmol