ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01197:01199

Extra

PDB:
ATOM 1 O3' U A1196 39.669 111.450 126.302 1.00 39.19 O
ATOM 2 P C A1197 39.733 109.932 125.803 1.00 39.13 P
ATOM 3 OP1 C A1197 39.798 109.108 127.030 1.00 39.85 O
ATOM 4 OP2 C A1197 40.778 109.775 124.758 1.00 42.09 O
ATOM 5 O5' C A1197 38.295 109.729 125.154 1.00 40.52 O
ATOM 6 C5' C A1197 38.114 109.161 123.848 1.00 37.42 C
ATOM 7 C4' C A1197 36.951 108.205 123.879 1.00 37.10 C
ATOM 8 O4' C A1197 36.171 108.433 125.080 1.00 38.43 O
ATOM 9 C3' C A1197 35.959 108.347 122.743 1.00 37.20 C
ATOM 10 O3' C A1197 36.397 107.613 121.601 1.00 37.52 O
ATOM 11 C2' C A1197 34.687 107.752 123.349 1.00 36.75 C
ATOM 12 O2' C A1197 34.654 106.336 123.319 1.00 35.90 O
ATOM 13 C1' C A1197 34.801 108.200 124.810 1.00 36.41 C
ATOM 14 N1 C A1197 34.029 109.410 125.155 1.00 35.17 N
ATOM 15 C2 C A1197 32.664 109.280 125.390 1.00 34.38 C
ATOM 16 O2 C A1197 32.157 108.161 125.325 1.00 36.89 O
ATOM 17 N3 C A1197 31.930 110.373 125.685 1.00 35.42 N
ATOM 18 C4 C A1197 32.519 111.567 125.761 1.00 36.20 C
ATOM 19 N4 C A1197 31.753 112.623 126.049 1.00 38.35 N
ATOM 20 C5 C A1197 33.918 111.732 125.543 1.00 33.54 C
ATOM 21 C6 C A1197 34.628 110.638 125.243 1.00 34.22 C
ATOM 22 P G A1198 36.948 108.382 120.299 1.00 35.02 P
ATOM 23 OP1 G A1198 36.752 107.443 119.166 1.00 37.36 O
ATOM 24 OP2 G A1198 38.307 108.900 120.601 1.00 35.81 O
ATOM 25 O5' G A1198 35.979 109.626 120.093 1.00 33.16 O
TER

ATOM 1 O3' G B1198 34.875 112.486 120.542 1.00 35.29 O
ATOM 2 P G B1199 34.654 112.549 122.126 1.00 35.45 P
ATOM 3 OP1 G B1199 35.969 112.843 122.741 1.00 35.20 O
ATOM 4 OP2 G B1199 33.911 111.325 122.522 1.00 34.17 O
ATOM 5 O5' G B1199 33.724 113.821 122.329 1.00 32.40 O
ATOM 6 C5' G B1199 34.237 115.135 122.091 1.00 32.07 C
ATOM 7 C4' G B1199 33.118 116.136 122.113 1.00 33.44 C
ATOM 8 O4' G B1199 32.128 115.736 121.130 1.00 35.32 O
ATOM 9 C3' G B1199 32.330 116.213 123.409 1.00 33.43 C
ATOM 10 O3' G B1199 32.961 117.035 124.381 1.00 34.30 O
ATOM 11 C2' G B1199 31.010 116.779 122.919 1.00 33.51 C
ATOM 12 O2' G B1199 31.125 118.147 122.585 1.00 30.97 O
ATOM 13 C1' G B1199 30.824 115.968 121.636 1.00 32.68 C
ATOM 14 N9 G B1199 30.207 114.666 121.889 1.00 32.35 N
ATOM 15 C8 G B1199 30.827 113.439 121.891 1.00 31.14 C
ATOM 16 N7 G B1199 30.014 112.456 122.161 1.00 31.17 N
ATOM 17 C5 G B1199 28.783 113.068 122.349 1.00 31.70 C
ATOM 18 C6 G B1199 27.520 112.512 122.676 1.00 33.18 C
ATOM 19 O6 G B1199 27.222 111.326 122.862 1.00 34.02 O
ATOM 20 N1 G B1199 26.544 113.495 122.786 1.00 33.72 N
ATOM 21 C2 G B1199 26.754 114.839 122.607 1.00 34.05 C
ATOM 22 N2 G B1199 25.691 115.642 122.778 1.00 35.87 N
ATOM 23 N3 G B1199 27.920 115.364 122.290 1.00 33.96 N
ATOM 24 C4 G B1199 28.884 114.430 122.183 1.00 32.28 C
ATOM 25 P G B1200 32.727 116.739 125.941 1.00 31.90 P
ATOM 26 OP1 G B1200 33.464 117.758 126.714 1.00 32.42 O
ATOM 27 OP2 G B1200 32.972 115.302 126.198 1.00 26.84 O
ATOM 28 O5' G B1200 31.179 117.041 126.138 1.00 34.23 O
TER

Atoms:
C2: (32.664,109.280,125.390)
OP1: (39.798,109.108,127.030)
OP2: (40.778,109.775,124.758)
C4: (32.519,111.567,125.761)
O5': (38.295,109.729,125.154)
C3': (35.959,108.347,122.743)
C1': (34.801,108.200,124.810)
O4': (36.171,108.433,125.080)
C5': (38.114,109.161,123.848)
P: (39.733,109.932,125.803)
O2: (32.157,108.161,125.325)
C4': (36.951,108.205,123.879)
C2': (34.687,107.752,123.349)
O2': (34.654,106.336,123.319)
N1: (34.029,109.410,125.155)
N3: (31.930,110.373,125.685)
N4: (31.753,112.623,126.049)
C6: (34.628,110.638,125.243)
C5: (33.918,111.732,125.543)
O3': (36.397,107.613,121.601)
OP1: (35.969,112.843,122.741)
OP2: (33.911,111.325,122.522)
C3': (32.330,116.213,123.409)
C1': (30.824,115.968,121.636)
C5': (34.237,115.135,122.091)
O6: (27.222,111.326,122.862)
O4': (32.128,115.736,121.130)
C8: (30.827,113.439,121.891)
C2: (26.754,114.839,122.607)
C6: (27.520,112.512,122.676)
C5: (28.783,113.068,122.349)
C4: (28.884,114.430,122.183)
P: (34.654,112.549,122.126)
C4': (33.118,116.136,122.113)
C2': (31.010,116.779,122.919)
O2': (31.125,118.147,122.585)
N1: (26.544,113.495,122.786)
N2: (25.691,115.642,122.778)
N3: (27.920,115.364,122.290)
N7: (30.014,112.456,122.161)
N9: (30.207,114.666,121.889)
O5': (33.724,113.821,122.329)
O3': (32.961,117.035,124.381)
Image (generated by PyMOL):
PyMOL image
show in jmol