Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01197:01199
Extra
PDB:
ATOM 1 O3' U A1196 39.440 111.703 126.564 1.00 48.42 O
ATOM 2 P C A1197 39.899 110.202 126.221 1.00 47.21 P
ATOM 3 OP1 C A1197 40.392 109.619 127.491 1.00 47.35 O
ATOM 4 OP2 C A1197 40.772 110.191 125.023 1.00 47.73 O
ATOM 5 O5' C A1197 38.543 109.461 125.831 1.00 49.72 O
ATOM 6 C5' C A1197 38.013 109.506 124.481 1.00 47.50 C
ATOM 7 C4' C A1197 36.916 108.476 124.329 1.00 46.42 C
ATOM 8 O4' C A1197 36.071 108.538 125.502 1.00 45.91 O
ATOM 9 C3' C A1197 35.985 108.669 123.139 1.00 46.15 C
ATOM 10 O3' C A1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 11 C2' C A1197 34.671 108.064 123.634 1.00 44.63 C
ATOM 12 O2' C A1197 34.599 106.662 123.495 1.00 45.66 O
ATOM 13 C1' C A1197 34.717 108.390 125.127 1.00 43.96 C
ATOM 14 N1 C A1197 33.987 109.607 125.512 1.00 42.20 N
ATOM 15 C2 C A1197 32.617 109.517 125.712 1.00 42.24 C
ATOM 16 O2 C A1197 32.064 108.424 125.549 1.00 43.86 O
ATOM 17 N3 C A1197 31.925 110.617 126.074 1.00 42.34 N
ATOM 18 C4 C A1197 32.561 111.778 126.232 1.00 42.58 C
ATOM 19 N4 C A1197 31.835 112.843 126.597 1.00 43.75 N
ATOM 20 C5 C A1197 33.966 111.901 126.027 1.00 39.87 C
ATOM 21 C6 C A1197 34.632 110.803 125.673 1.00 40.23 C
ATOM 22 P G A1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 23 OP1 G A1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 24 OP2 G A1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 25 O5' G A1198 36.093 110.026 120.514 1.00 44.42 O
TER
ATOM 1 O3' G B1198 34.919 112.866 120.991 1.00 41.76 O
ATOM 2 P G B1199 34.689 112.952 122.575 1.00 41.46 P
ATOM 3 OP1 G B1199 35.989 113.291 123.190 1.00 41.47 O
ATOM 4 OP2 G B1199 33.957 111.728 123.011 1.00 37.35 O
ATOM 5 O5' G B1199 33.762 114.227 122.748 1.00 38.89 O
ATOM 6 C5' G B1199 34.254 115.533 122.426 1.00 37.99 C
ATOM 7 C4' G B1199 33.152 116.541 122.565 1.00 38.38 C
ATOM 8 O4' G B1199 32.116 116.232 121.599 1.00 39.75 O
ATOM 9 C3' G B1199 32.426 116.525 123.899 1.00 39.08 C
ATOM 10 O3' G B1199 33.107 117.270 124.898 1.00 40.97 O
ATOM 11 C2' G B1199 31.083 117.120 123.515 1.00 39.49 C
ATOM 12 O2' G B1199 31.174 118.517 123.287 1.00 38.59 O
ATOM 13 C1' G B1199 30.837 116.403 122.189 1.00 38.26 C
ATOM 14 N9 G B1199 30.257 115.075 122.387 1.00 37.46 N
ATOM 15 C8 G B1199 30.921 113.878 122.355 1.00 36.67 C
ATOM 16 N7 G B1199 30.148 112.856 122.589 1.00 38.59 N
ATOM 17 C5 G B1199 28.893 113.409 122.783 1.00 39.00 C
ATOM 18 C6 G B1199 27.652 112.789 123.084 1.00 40.83 C
ATOM 19 O6 G B1199 27.406 111.582 123.236 1.00 41.90 O
ATOM 20 N1 G B1199 26.633 113.725 123.213 1.00 40.89 N
ATOM 21 C2 G B1199 26.785 115.082 123.068 1.00 41.41 C
ATOM 22 N2 G B1199 25.688 115.829 123.243 1.00 41.93 N
ATOM 23 N3 G B1199 27.932 115.668 122.779 1.00 41.60 N
ATOM 24 C4 G B1199 28.940 114.778 122.656 1.00 39.30 C
ATOM 25 P G B1200 32.830 116.961 126.447 1.00 41.02 P
ATOM 26 OP1 G B1200 33.608 117.947 127.237 1.00 41.73 O
ATOM 27 OP2 G B1200 33.016 115.517 126.689 1.00 38.28 O
ATOM 28 O5' G B1200 31.281 117.279 126.633 1.00 41.79 O
TER
ATOM 2 P C A1197 39.899 110.202 126.221 1.00 47.21 P
ATOM 3 OP1 C A1197 40.392 109.619 127.491 1.00 47.35 O
ATOM 4 OP2 C A1197 40.772 110.191 125.023 1.00 47.73 O
ATOM 5 O5' C A1197 38.543 109.461 125.831 1.00 49.72 O
ATOM 6 C5' C A1197 38.013 109.506 124.481 1.00 47.50 C
ATOM 7 C4' C A1197 36.916 108.476 124.329 1.00 46.42 C
ATOM 8 O4' C A1197 36.071 108.538 125.502 1.00 45.91 O
ATOM 9 C3' C A1197 35.985 108.669 123.139 1.00 46.15 C
ATOM 10 O3' C A1197 36.461 107.971 121.979 1.00 45.98 O
ATOM 11 C2' C A1197 34.671 108.064 123.634 1.00 44.63 C
ATOM 12 O2' C A1197 34.599 106.662 123.495 1.00 45.66 O
ATOM 13 C1' C A1197 34.717 108.390 125.127 1.00 43.96 C
ATOM 14 N1 C A1197 33.987 109.607 125.512 1.00 42.20 N
ATOM 15 C2 C A1197 32.617 109.517 125.712 1.00 42.24 C
ATOM 16 O2 C A1197 32.064 108.424 125.549 1.00 43.86 O
ATOM 17 N3 C A1197 31.925 110.617 126.074 1.00 42.34 N
ATOM 18 C4 C A1197 32.561 111.778 126.232 1.00 42.58 C
ATOM 19 N4 C A1197 31.835 112.843 126.597 1.00 43.75 N
ATOM 20 C5 C A1197 33.966 111.901 126.027 1.00 39.87 C
ATOM 21 C6 C A1197 34.632 110.803 125.673 1.00 40.23 C
ATOM 22 P G A1198 37.067 108.783 120.724 1.00 45.82 P
ATOM 23 OP1 G A1198 36.955 107.907 119.529 1.00 46.92 O
ATOM 24 OP2 G A1198 38.402 109.297 121.135 1.00 45.87 O
ATOM 25 O5' G A1198 36.093 110.026 120.514 1.00 44.42 O
TER
ATOM 1 O3' G B1198 34.919 112.866 120.991 1.00 41.76 O
ATOM 2 P G B1199 34.689 112.952 122.575 1.00 41.46 P
ATOM 3 OP1 G B1199 35.989 113.291 123.190 1.00 41.47 O
ATOM 4 OP2 G B1199 33.957 111.728 123.011 1.00 37.35 O
ATOM 5 O5' G B1199 33.762 114.227 122.748 1.00 38.89 O
ATOM 6 C5' G B1199 34.254 115.533 122.426 1.00 37.99 C
ATOM 7 C4' G B1199 33.152 116.541 122.565 1.00 38.38 C
ATOM 8 O4' G B1199 32.116 116.232 121.599 1.00 39.75 O
ATOM 9 C3' G B1199 32.426 116.525 123.899 1.00 39.08 C
ATOM 10 O3' G B1199 33.107 117.270 124.898 1.00 40.97 O
ATOM 11 C2' G B1199 31.083 117.120 123.515 1.00 39.49 C
ATOM 12 O2' G B1199 31.174 118.517 123.287 1.00 38.59 O
ATOM 13 C1' G B1199 30.837 116.403 122.189 1.00 38.26 C
ATOM 14 N9 G B1199 30.257 115.075 122.387 1.00 37.46 N
ATOM 15 C8 G B1199 30.921 113.878 122.355 1.00 36.67 C
ATOM 16 N7 G B1199 30.148 112.856 122.589 1.00 38.59 N
ATOM 17 C5 G B1199 28.893 113.409 122.783 1.00 39.00 C
ATOM 18 C6 G B1199 27.652 112.789 123.084 1.00 40.83 C
ATOM 19 O6 G B1199 27.406 111.582 123.236 1.00 41.90 O
ATOM 20 N1 G B1199 26.633 113.725 123.213 1.00 40.89 N
ATOM 21 C2 G B1199 26.785 115.082 123.068 1.00 41.41 C
ATOM 22 N2 G B1199 25.688 115.829 123.243 1.00 41.93 N
ATOM 23 N3 G B1199 27.932 115.668 122.779 1.00 41.60 N
ATOM 24 C4 G B1199 28.940 114.778 122.656 1.00 39.30 C
ATOM 25 P G B1200 32.830 116.961 126.447 1.00 41.02 P
ATOM 26 OP1 G B1200 33.608 117.947 127.237 1.00 41.73 O
ATOM 27 OP2 G B1200 33.016 115.517 126.689 1.00 38.28 O
ATOM 28 O5' G B1200 31.281 117.279 126.633 1.00 41.79 O
TER
Atoms:
C2: (32.617,109.517,125.712)
OP1: (40.392,109.619,127.491)
OP2: (40.772,110.191,125.023)
C4: (32.561,111.778,126.232)
O5': (38.543,109.461,125.831)
C3': (35.985,108.669,123.139)
C1': (34.717,108.390,125.127)
O4': (36.071,108.538,125.502)
C5': (38.013,109.506,124.481)
P: (39.899,110.202,126.221)
O2: (32.064,108.424,125.549)
C4': (36.916,108.476,124.329)
C2': (34.671,108.064,123.634)
O2': (34.599,106.662,123.495)
N1: (33.987,109.607,125.512)
N3: (31.925,110.617,126.074)
N4: (31.835,112.843,126.597)
C6: (34.632,110.803,125.673)
C5: (33.966,111.901,126.027)
O3': (36.461,107.971,121.979)
OP1: (40.392,109.619,127.491)
OP2: (40.772,110.191,125.023)
C4: (32.561,111.778,126.232)
O5': (38.543,109.461,125.831)
C3': (35.985,108.669,123.139)
C1': (34.717,108.390,125.127)
O4': (36.071,108.538,125.502)
C5': (38.013,109.506,124.481)
P: (39.899,110.202,126.221)
O2: (32.064,108.424,125.549)
C4': (36.916,108.476,124.329)
C2': (34.671,108.064,123.634)
O2': (34.599,106.662,123.495)
N1: (33.987,109.607,125.512)
N3: (31.925,110.617,126.074)
N4: (31.835,112.843,126.597)
C6: (34.632,110.803,125.673)
C5: (33.966,111.901,126.027)
O3': (36.461,107.971,121.979)
OP1: (35.989,113.291,123.190)
OP2: (33.957,111.728,123.011)
C3': (32.426,116.525,123.899)
C1': (30.837,116.403,122.189)
C5': (34.254,115.533,122.426)
O6: (27.406,111.582,123.236)
O4': (32.116,116.232,121.599)
C8: (30.921,113.878,122.355)
C2: (26.785,115.082,123.068)
C6: (27.652,112.789,123.084)
C5: (28.893,113.409,122.783)
C4: (28.940,114.778,122.656)
P: (34.689,112.952,122.575)
C4': (33.152,116.541,122.565)
C2': (31.083,117.120,123.515)
O2': (31.174,118.517,123.287)
N1: (26.633,113.725,123.213)
N2: (25.688,115.829,123.243)
N3: (27.932,115.668,122.779)
N7: (30.148,112.856,122.589)
N9: (30.257,115.075,122.387)
O5': (33.762,114.227,122.748)
O3': (33.107,117.270,124.898)
OP2: (33.957,111.728,123.011)
C3': (32.426,116.525,123.899)
C1': (30.837,116.403,122.189)
C5': (34.254,115.533,122.426)
O6: (27.406,111.582,123.236)
O4': (32.116,116.232,121.599)
C8: (30.921,113.878,122.355)
C2: (26.785,115.082,123.068)
C6: (27.652,112.789,123.084)
C5: (28.893,113.409,122.783)
C4: (28.940,114.778,122.656)
P: (34.689,112.952,122.575)
C4': (33.152,116.541,122.565)
C2': (31.083,117.120,123.515)
O2': (31.174,118.517,123.287)
N1: (26.633,113.725,123.213)
N2: (25.688,115.829,123.243)
N3: (27.932,115.668,122.779)
N7: (30.148,112.856,122.589)
N9: (30.257,115.075,122.387)
O5': (33.762,114.227,122.748)
O3': (33.107,117.270,124.898)
Image (generated by PyMOL):