ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01197:01199

Extra

PDB:
ATOM 1 O3' U A1196 39.285 111.562 126.127 1.00 44.07 O
ATOM 2 P C A1197 39.775 110.075 125.793 1.00 43.34 P
ATOM 3 OP1 C A1197 40.239 109.497 127.073 1.00 43.32 O
ATOM 4 OP2 C A1197 40.678 110.074 124.618 1.00 44.93 O
ATOM 5 O5' C A1197 38.443 109.314 125.387 1.00 43.71 O
ATOM 6 C5' C A1197 37.940 109.327 124.041 1.00 42.13 C
ATOM 7 C4' C A1197 36.817 108.330 123.934 1.00 44.00 C
ATOM 8 O4' C A1197 35.988 108.469 125.115 1.00 44.03 O
ATOM 9 C3' C A1197 35.873 108.482 122.752 1.00 45.05 C
ATOM 10 O3' C A1197 36.348 107.764 121.604 1.00 45.49 O
ATOM 11 C2' C A1197 34.581 107.866 123.292 1.00 44.62 C
ATOM 12 O2' C A1197 34.565 106.450 123.203 1.00 43.99 O
ATOM 13 C1' C A1197 34.632 108.274 124.773 1.00 43.49 C
ATOM 14 N1 C A1197 33.878 109.491 125.137 1.00 41.66 N
ATOM 15 C2 C A1197 32.499 109.392 125.349 1.00 42.76 C
ATOM 16 O2 C A1197 31.951 108.287 125.243 1.00 45.04 O
ATOM 17 N3 C A1197 31.795 110.502 125.661 1.00 42.49 N
ATOM 18 C4 C A1197 32.415 111.675 125.765 1.00 42.24 C
ATOM 19 N4 C A1197 31.673 112.746 126.053 1.00 42.21 N
ATOM 20 C5 C A1197 33.822 111.803 125.572 1.00 40.92 C
ATOM 21 C6 C A1197 34.506 110.697 125.262 1.00 40.38 C
ATOM 22 P G A1198 36.891 108.558 120.307 1.00 45.69 P
ATOM 23 OP1 G A1198 36.728 107.650 119.137 1.00 45.22 O
ATOM 24 OP2 G A1198 38.235 109.101 120.639 1.00 45.27 O
ATOM 25 O5' G A1198 35.904 109.794 120.114 1.00 44.21 O
TER

ATOM 1 O3' G B1198 34.774 112.634 120.621 1.00 41.73 O
ATOM 2 P G B1199 34.531 112.663 122.200 1.00 42.53 P
ATOM 3 OP1 G B1199 35.859 112.895 122.810 1.00 43.58 O
ATOM 4 OP2 G B1199 33.742 111.456 122.570 1.00 39.15 O
ATOM 5 O5' G B1199 33.640 113.957 122.433 1.00 38.00 O
ATOM 6 C5' G B1199 34.161 115.253 122.154 1.00 36.47 C
ATOM 7 C4' G B1199 33.052 116.263 122.170 1.00 37.07 C
ATOM 8 O4' G B1199 32.071 115.895 121.167 1.00 37.00 O
ATOM 9 C3' G B1199 32.252 116.339 123.457 1.00 37.07 C
ATOM 10 O3' G B1199 32.877 117.147 124.442 1.00 38.64 O
ATOM 11 C2' G B1199 30.937 116.912 122.962 1.00 37.29 C
ATOM 12 O2' G B1199 31.048 118.291 122.662 1.00 35.23 O
ATOM 13 C1' G B1199 30.760 116.117 121.667 1.00 36.67 C
ATOM 14 N9 G B1199 30.148 114.807 121.893 1.00 35.14 N
ATOM 15 C8 G B1199 30.782 113.592 121.841 1.00 35.08 C
ATOM 16 N7 G B1199 29.994 112.589 122.096 1.00 35.61 N
ATOM 17 C5 G B1199 28.759 113.173 122.330 1.00 35.70 C
ATOM 18 C6 G B1199 27.511 112.580 122.668 1.00 37.20 C
ATOM 19 O6 G B1199 27.241 111.380 122.830 1.00 35.60 O
ATOM 20 N1 G B1199 26.520 113.539 122.826 1.00 37.74 N
ATOM 21 C2 G B1199 26.701 114.892 122.683 1.00 38.22 C
ATOM 22 N2 G B1199 25.617 115.660 122.888 1.00 39.96 N
ATOM 23 N3 G B1199 27.857 115.455 122.367 1.00 37.00 N
ATOM 24 C4 G B1199 28.836 114.543 122.208 1.00 34.92 C
ATOM 25 P G B1200 32.587 116.864 125.994 1.00 38.39 P
ATOM 26 OP1 G B1200 33.318 117.881 126.790 1.00 36.52 O
ATOM 27 OP2 G B1200 32.811 115.423 126.259 1.00 35.17 O
ATOM 28 O5' G B1200 31.031 117.164 126.125 1.00 38.68 O
TER

Atoms:
C2: (32.499,109.392,125.349)
OP1: (40.239,109.497,127.073)
OP2: (40.678,110.074,124.618)
C4: (32.415,111.675,125.765)
O5': (38.443,109.314,125.387)
C3': (35.873,108.482,122.752)
C1': (34.632,108.274,124.773)
O4': (35.988,108.469,125.115)
C5': (37.940,109.327,124.041)
P: (39.775,110.075,125.793)
O2: (31.951,108.287,125.243)
C4': (36.817,108.330,123.934)
C2': (34.581,107.866,123.292)
O2': (34.565,106.450,123.203)
N1: (33.878,109.491,125.137)
N3: (31.795,110.502,125.661)
N4: (31.673,112.746,126.053)
C6: (34.506,110.697,125.262)
C5: (33.822,111.803,125.572)
O3': (36.348,107.764,121.604)
OP1: (35.859,112.895,122.810)
OP2: (33.742,111.456,122.570)
C3': (32.252,116.339,123.457)
C1': (30.760,116.117,121.667)
C5': (34.161,115.253,122.154)
O6: (27.241,111.380,122.830)
O4': (32.071,115.895,121.167)
C8: (30.782,113.592,121.841)
C2: (26.701,114.892,122.683)
C6: (27.511,112.580,122.668)
C5: (28.759,113.173,122.330)
C4: (28.836,114.543,122.208)
P: (34.531,112.663,122.200)
C4': (33.052,116.263,122.170)
C2': (30.937,116.912,122.962)
O2': (31.048,118.291,122.662)
N1: (26.520,113.539,122.826)
N2: (25.617,115.660,122.888)
N3: (27.857,115.455,122.367)
N7: (29.994,112.589,122.096)
N9: (30.148,114.807,121.893)
O5': (33.640,113.957,122.433)
O3': (32.877,117.147,124.442)
Image (generated by PyMOL):
PyMOL image
show in jmol