ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A1043:A1041

Extra

PDB:
ATOM 1 O3' U A1042 -73.896 107.719 57.266 1.00105.10 O
ATOM 2 P C A1043 -73.161 109.000 57.879 1.00124.67 P
ATOM 3 OP1 C A1043 -74.172 109.811 58.604 1.00112.35 O
ATOM 4 OP2 C A1043 -72.364 109.607 56.787 1.00105.98 O
ATOM 5 O5' C A1043 -72.148 108.361 58.941 1.00113.81 O
ATOM 6 C5' C A1043 -71.276 107.337 58.496 1.00111.49 C
ATOM 7 C4' C A1043 -69.964 107.351 59.251 1.00 94.09 C
ATOM 8 O4' C A1043 -70.056 106.425 60.359 1.00 92.65 O
ATOM 9 C3' C A1043 -68.789 106.908 58.396 1.00 89.93 C
ATOM 10 O3' C A1043 -67.992 108.041 58.091 1.00 89.10 O
ATOM 11 C2' C A1043 -68.026 105.929 59.273 1.00 91.60 C
ATOM 12 O2' C A1043 -67.024 106.594 60.009 1.00101.64 O
ATOM 13 C1' C A1043 -69.081 105.416 60.241 1.00 94.01 C
ATOM 14 N1 C A1043 -69.749 104.152 59.839 1.00 98.54 N
ATOM 15 C2 C A1043 -68.983 103.022 59.549 1.00104.95 C
ATOM 16 O2 C A1043 -67.749 103.085 59.612 1.00 98.91 O
ATOM 17 N3 C A1043 -69.621 101.878 59.197 1.00108.14 N
ATOM 18 C4 C A1043 -70.953 101.835 59.133 1.00100.99 C
ATOM 19 N4 C A1043 -71.525 100.679 58.777 1.00 93.66 N
ATOM 20 C5 C A1043 -71.748 102.978 59.431 1.00100.09 C
ATOM 21 C6 C A1043 -71.108 104.099 59.777 1.00 95.89 C
ATOM 22 P A A1044 -67.728 108.419 56.557 1.00105.40 P
ATOM 23 OP1 A A1044 -67.084 109.749 56.490 1.00 95.17 O
ATOM 24 OP2 A A1044 -68.993 108.176 55.827 1.00118.34 O
ATOM 25 O5' A A1044 -66.680 107.312 56.069 1.00 83.37 O
TER

ATOM 1 O3' C B1040 -70.053 105.295 67.117 1.00 72.28 O
ATOM 2 P G B1041 -69.530 105.947 65.755 1.00105.69 P
ATOM 3 OP1 G B1041 -68.181 105.413 65.486 1.00 88.98 O
ATOM 4 OP2 G B1041 -69.744 107.407 65.842 1.00 99.89 O
ATOM 5 O5' G B1041 -70.525 105.386 64.651 1.00 96.89 O
ATOM 6 C5' G B1041 -70.798 106.192 63.517 1.00 97.83 C
ATOM 7 C4' G B1041 -72.185 105.866 63.002 1.00103.53 C
ATOM 8 O4' G B1041 -72.092 104.656 62.216 1.00 88.30 O
ATOM 9 C3' G B1041 -73.196 105.591 64.117 1.00108.20 C
ATOM 10 O3' G B1041 -74.509 106.275 63.927 1.00114.42 O
ATOM 11 C2' G B1041 -73.145 104.056 64.264 1.00 88.71 C
ATOM 12 O2' G B1041 -74.368 103.462 64.656 1.00 89.47 O
ATOM 13 C1' G B1041 -72.740 103.588 62.867 1.00 86.73 C
ATOM 14 N9 G B1041 -71.796 102.485 62.815 1.00 87.87 N
ATOM 15 C8 G B1041 -70.446 102.522 63.047 1.00 90.69 C
ATOM 16 N7 G B1041 -69.865 101.362 62.903 1.00 94.38 N
ATOM 17 C5 G B1041 -70.900 100.513 62.545 1.00 97.10 C
ATOM 18 C6 G B1041 -70.886 99.134 62.255 1.00 95.37 C
ATOM 19 O6 G B1041 -69.918 98.367 62.261 1.00 96.77 O
ATOM 20 N1 G B1041 -72.155 98.659 61.934 1.00100.59 N
ATOM 21 C2 G B1041 -73.295 99.432 61.902 1.00107.81 C
ATOM 22 N2 G B1041 -74.435 98.811 61.577 1.00113.23 N
ATOM 23 N3 G B1041 -73.325 100.728 62.171 1.00102.35 N
ATOM 24 C4 G B1041 -72.093 101.192 62.482 1.00 99.48 C
ATOM 25 P U B1042 -75.606 106.095 62.758 1.00106.32 P
ATOM 26 OP1 U B1042 -76.824 106.832 63.160 1.00 98.03 O
ATOM 27 OP2 U B1042 -75.708 104.653 62.469 1.00108.56 O
ATOM 28 O5' U B1042 -74.984 106.825 61.479 1.00 94.95 O
TER

Atoms:
C2: (-68.983,103.022,59.549)
OP1: (-74.172,109.811,58.604)
OP2: (-72.364,109.607,56.787)
C4: (-70.953,101.835,59.133)
O5': (-72.148,108.361,58.941)
C3': (-68.789,106.908,58.396)
C1': (-69.081,105.416,60.241)
O4': (-70.056,106.425,60.359)
C5': (-71.276,107.337,58.496)
P: (-73.161,109.000,57.879)
O2: (-67.749,103.085,59.612)
C4': (-69.964,107.351,59.251)
C2': (-68.026,105.929,59.273)
O2': (-67.024,106.594,60.009)
N1: (-69.749,104.152,59.839)
N3: (-69.621,101.878,59.197)
N4: (-71.525,100.679,58.777)
C6: (-71.108,104.099,59.777)
C5: (-71.748,102.978,59.431)
O3': (-67.992,108.041,58.091)
OP1: (-68.181,105.413,65.486)
OP2: (-69.744,107.407,65.842)
C3': (-73.196,105.591,64.117)
C1': (-72.740,103.588,62.867)
C5': (-70.798,106.192,63.517)
O6: (-69.918,98.367,62.261)
O4': (-72.092,104.656,62.216)
C8: (-70.446,102.522,63.047)
C2: (-73.295,99.432,61.902)
C6: (-70.886,99.134,62.255)
C5: (-70.900,100.513,62.545)
C4: (-72.093,101.192,62.482)
P: (-69.530,105.947,65.755)
C4': (-72.185,105.866,63.002)
C2': (-73.145,104.056,64.264)
O2': (-74.368,103.462,64.656)
N1: (-72.155,98.659,61.934)
N2: (-74.435,98.811,61.577)
N3: (-73.325,100.728,62.171)
N7: (-69.865,101.362,62.903)
N9: (-71.796,102.485,62.815)
O5': (-70.525,105.386,64.651)
O3': (-74.509,106.275,63.927)
Image (generated by PyMOL):
PyMOL image
show in jmol