Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:199:198
Extra
PDB:
ATOM 1 O3' G A 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 2 P C A 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 3 OP1 C A 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 4 OP2 C A 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 5 O5' C A 99 63.369 -51.080 108.201 1.00 47.13 O
ATOM 6 C5' C A 99 63.283 -52.423 108.582 1.00 47.57 C
ATOM 7 C4' C A 99 63.728 -53.311 107.461 1.00 47.57 C
ATOM 8 O4' C A 99 62.941 -53.029 106.276 1.00 47.07 O
ATOM 9 C3' C A 99 65.163 -53.134 107.022 1.00 47.62 C
ATOM 10 O3' C A 99 66.079 -53.875 107.855 1.00 48.18 O
ATOM 11 C2' C A 99 65.111 -53.595 105.556 1.00 47.36 C
ATOM 12 O2' C A 99 65.107 -54.989 105.469 1.00 47.73 O
ATOM 13 C1' C A 99 63.733 -53.131 105.118 1.00 46.92 C
ATOM 14 N1 C A 99 63.793 -51.820 104.466 1.00 46.41 N
ATOM 15 C2 C A 99 64.375 -51.705 103.192 1.00 46.15 C
ATOM 16 O2 C A 99 64.744 -52.768 102.661 1.00 46.36 O
ATOM 17 N3 C A 99 64.493 -50.476 102.593 1.00 45.71 N
ATOM 18 C4 C A 99 64.029 -49.406 103.266 1.00 45.53 C
ATOM 19 N4 C A 99 64.107 -48.157 102.777 1.00 45.12 N
ATOM 20 C5 C A 99 63.424 -49.529 104.556 1.00 45.79 C
ATOM 21 C6 C A 99 63.321 -50.728 105.126 1.00 46.23 C
ATOM 22 P G A 100 67.480 -53.247 108.387 1.00 46.92 P
ATOM 23 OP1 G A 100 68.234 -54.340 109.027 1.00 47.52 O
ATOM 24 OP2 G A 100 67.157 -52.062 109.200 1.00 46.77 O
ATOM 25 O5' G A 100 68.216 -52.804 107.036 1.00 46.55 O
TER
ATOM 1 O3' A B 97 57.479 -45.890 107.418 1.00 46.42 O
ATOM 2 P G B 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 3 OP1 G B 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 4 OP2 G B 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 5 O5' G B 98 59.119 -47.722 107.480 1.00 45.84 O
ATOM 6 C5' G B 98 58.571 -48.625 108.384 1.00 46.23 C
ATOM 7 C4' G B 98 58.813 -50.046 107.976 1.00 46.50 C
ATOM 8 O4' G B 98 58.108 -50.367 106.759 1.00 46.17 O
ATOM 9 C3' G B 98 60.230 -50.437 107.668 1.00 46.69 C
ATOM 10 O3' G B 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 11 C2' G B 98 60.004 -51.767 106.978 1.00 46.82 C
ATOM 12 O2' G B 98 59.787 -52.783 107.932 1.00 47.31 O
ATOM 13 C1' G B 98 58.687 -51.516 106.216 1.00 46.40 C
ATOM 14 N9 G B 98 58.958 -51.325 104.799 1.00 46.03 N
ATOM 15 C8 G B 98 58.989 -52.391 103.956 1.00 46.10 C
ATOM 16 N7 G B 98 59.383 -52.075 102.774 1.00 45.79 N
ATOM 17 C5 G B 98 59.673 -50.718 102.864 1.00 45.49 C
ATOM 18 C6 G B 98 60.168 -49.837 101.875 1.00 45.09 C
ATOM 19 O6 G B 98 60.429 -50.109 100.721 1.00 44.93 O
ATOM 20 N1 G B 98 60.340 -48.549 102.365 1.00 44.91 N
ATOM 21 C2 G B 98 60.067 -48.188 103.674 1.00 45.10 C
ATOM 22 N2 G B 98 60.279 -46.921 104.009 1.00 44.91 N
ATOM 23 N3 G B 98 59.616 -49.012 104.611 1.00 45.47 N
ATOM 24 C4 G B 98 59.445 -50.254 104.132 1.00 45.65 C
ATOM 25 P C B 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 26 OP1 C B 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 27 OP2 C B 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 28 O5' C B 99 63.369 -51.080 108.201 1.00 47.13 O
TER
ATOM 2 P C A 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 3 OP1 C A 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 4 OP2 C A 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 5 O5' C A 99 63.369 -51.080 108.201 1.00 47.13 O
ATOM 6 C5' C A 99 63.283 -52.423 108.582 1.00 47.57 C
ATOM 7 C4' C A 99 63.728 -53.311 107.461 1.00 47.57 C
ATOM 8 O4' C A 99 62.941 -53.029 106.276 1.00 47.07 O
ATOM 9 C3' C A 99 65.163 -53.134 107.022 1.00 47.62 C
ATOM 10 O3' C A 99 66.079 -53.875 107.855 1.00 48.18 O
ATOM 11 C2' C A 99 65.111 -53.595 105.556 1.00 47.36 C
ATOM 12 O2' C A 99 65.107 -54.989 105.469 1.00 47.73 O
ATOM 13 C1' C A 99 63.733 -53.131 105.118 1.00 46.92 C
ATOM 14 N1 C A 99 63.793 -51.820 104.466 1.00 46.41 N
ATOM 15 C2 C A 99 64.375 -51.705 103.192 1.00 46.15 C
ATOM 16 O2 C A 99 64.744 -52.768 102.661 1.00 46.36 O
ATOM 17 N3 C A 99 64.493 -50.476 102.593 1.00 45.71 N
ATOM 18 C4 C A 99 64.029 -49.406 103.266 1.00 45.53 C
ATOM 19 N4 C A 99 64.107 -48.157 102.777 1.00 45.12 N
ATOM 20 C5 C A 99 63.424 -49.529 104.556 1.00 45.79 C
ATOM 21 C6 C A 99 63.321 -50.728 105.126 1.00 46.23 C
ATOM 22 P G A 100 67.480 -53.247 108.387 1.00 46.92 P
ATOM 23 OP1 G A 100 68.234 -54.340 109.027 1.00 47.52 O
ATOM 24 OP2 G A 100 67.157 -52.062 109.200 1.00 46.77 O
ATOM 25 O5' G A 100 68.216 -52.804 107.036 1.00 46.55 O
TER
ATOM 1 O3' A B 97 57.479 -45.890 107.418 1.00 46.42 O
ATOM 2 P G B 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 3 OP1 G B 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 4 OP2 G B 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 5 O5' G B 98 59.119 -47.722 107.480 1.00 45.84 O
ATOM 6 C5' G B 98 58.571 -48.625 108.384 1.00 46.23 C
ATOM 7 C4' G B 98 58.813 -50.046 107.976 1.00 46.50 C
ATOM 8 O4' G B 98 58.108 -50.367 106.759 1.00 46.17 O
ATOM 9 C3' G B 98 60.230 -50.437 107.668 1.00 46.69 C
ATOM 10 O3' G B 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 11 C2' G B 98 60.004 -51.767 106.978 1.00 46.82 C
ATOM 12 O2' G B 98 59.787 -52.783 107.932 1.00 47.31 O
ATOM 13 C1' G B 98 58.687 -51.516 106.216 1.00 46.40 C
ATOM 14 N9 G B 98 58.958 -51.325 104.799 1.00 46.03 N
ATOM 15 C8 G B 98 58.989 -52.391 103.956 1.00 46.10 C
ATOM 16 N7 G B 98 59.383 -52.075 102.774 1.00 45.79 N
ATOM 17 C5 G B 98 59.673 -50.718 102.864 1.00 45.49 C
ATOM 18 C6 G B 98 60.168 -49.837 101.875 1.00 45.09 C
ATOM 19 O6 G B 98 60.429 -50.109 100.721 1.00 44.93 O
ATOM 20 N1 G B 98 60.340 -48.549 102.365 1.00 44.91 N
ATOM 21 C2 G B 98 60.067 -48.188 103.674 1.00 45.10 C
ATOM 22 N2 G B 98 60.279 -46.921 104.009 1.00 44.91 N
ATOM 23 N3 G B 98 59.616 -49.012 104.611 1.00 45.47 N
ATOM 24 C4 G B 98 59.445 -50.254 104.132 1.00 45.65 C
ATOM 25 P C B 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 26 OP1 C B 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 27 OP2 C B 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 28 O5' C B 99 63.369 -51.080 108.201 1.00 47.13 O
TER
Atoms:
C2: (64.375,-51.705,103.192)
OP1: (62.844,-49.901,110.336)
OP2: (62.557,-48.712,108.102)
C4: (64.029,-49.406,103.266)
O5': (63.369,-51.080,108.201)
C3': (65.163,-53.134,107.022)
C1': (63.733,-53.131,105.118)
O4': (62.941,-53.029,106.276)
C5': (63.283,-52.423,108.582)
P: (62.506,-49.966,108.910)
O2: (64.744,-52.768,102.661)
C4': (63.728,-53.311,107.461)
C2': (65.111,-53.595,105.556)
O2': (65.107,-54.989,105.469)
N1: (63.793,-51.820,104.466)
N3: (64.493,-50.476,102.593)
N4: (64.107,-48.157,102.777)
C6: (63.321,-50.728,105.126)
C5: (63.424,-49.529,104.556)
O3': (66.079,-53.875,107.855)
OP1: (62.844,-49.901,110.336)
OP2: (62.557,-48.712,108.102)
C4: (64.029,-49.406,103.266)
O5': (63.369,-51.080,108.201)
C3': (65.163,-53.134,107.022)
C1': (63.733,-53.131,105.118)
O4': (62.941,-53.029,106.276)
C5': (63.283,-52.423,108.582)
P: (62.506,-49.966,108.910)
O2: (64.744,-52.768,102.661)
C4': (63.728,-53.311,107.461)
C2': (65.111,-53.595,105.556)
O2': (65.107,-54.989,105.469)
N1: (63.793,-51.820,104.466)
N3: (64.493,-50.476,102.593)
N4: (64.107,-48.157,102.777)
C6: (63.321,-50.728,105.126)
C5: (63.424,-49.529,104.556)
O3': (66.079,-53.875,107.855)
OP1: (59.170,-45.918,109.238)
OP2: (59.857,-45.406,106.795)
C3': (60.230,-50.437,107.668)
C1': (58.687,-51.516,106.216)
C5': (58.571,-48.625,108.384)
O6: (60.429,-50.109,100.721)
O4': (58.108,-50.367,106.759)
C8: (58.989,-52.391,103.956)
C2: (60.067,-48.188,103.674)
C6: (60.168,-49.837,101.875)
C5: (59.673,-50.718,102.864)
C4: (59.445,-50.254,104.132)
P: (59.006,-46.179,107.766)
C4': (58.813,-50.046,107.976)
C2': (60.004,-51.767,106.978)
O2': (59.787,-52.783,107.932)
N1: (60.340,-48.549,102.365)
N2: (60.279,-46.921,104.009)
N3: (59.616,-49.012,104.611)
N7: (59.383,-52.075,102.774)
N9: (58.958,-51.325,104.799)
O5': (59.119,-47.722,107.480)
O3': (61.012,-50.553,108.835)
OP2: (59.857,-45.406,106.795)
C3': (60.230,-50.437,107.668)
C1': (58.687,-51.516,106.216)
C5': (58.571,-48.625,108.384)
O6: (60.429,-50.109,100.721)
O4': (58.108,-50.367,106.759)
C8: (58.989,-52.391,103.956)
C2: (60.067,-48.188,103.674)
C6: (60.168,-49.837,101.875)
C5: (59.673,-50.718,102.864)
C4: (59.445,-50.254,104.132)
P: (59.006,-46.179,107.766)
C4': (58.813,-50.046,107.976)
C2': (60.004,-51.767,106.978)
O2': (59.787,-52.783,107.932)
N1: (60.340,-48.549,102.365)
N2: (60.279,-46.921,104.009)
N3: (59.616,-49.012,104.611)
N7: (59.383,-52.075,102.774)
N9: (58.958,-51.325,104.799)
O5': (59.119,-47.722,107.480)
O3': (61.012,-50.553,108.835)
Image (generated by PyMOL):