Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B35:B33
Extra
PDB:
ATOM 1 O3' U A 34 -24.253 -10.334 28.512 1.00 48.08 O
ATOM 2 P C A 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 3 OP1 C A 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 4 OP2 C A 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 5 O5' C A 35 -22.151 -11.177 29.617 1.00 46.35 O
ATOM 6 C5' C A 35 -21.032 -11.086 30.531 1.00 43.27 C
ATOM 7 C4' C A 35 -19.716 -11.261 29.786 1.00 41.41 C
ATOM 8 O4' C A 35 -19.693 -12.566 29.144 1.00 40.69 O
ATOM 9 C3' C A 35 -19.417 -10.270 28.665 1.00 39.87 C
ATOM 10 O3' C A 35 -18.779 -9.096 29.156 1.00 38.44 O
ATOM 11 C2' C A 35 -18.466 -11.056 27.776 1.00 39.46 C
ATOM 12 O2' C A 35 -17.158 -11.034 28.302 1.00 39.45 O
ATOM 13 C1' C A 35 -19.023 -12.475 27.899 1.00 39.49 C
ATOM 14 N1 C A 35 -19.984 -12.812 26.829 1.00 38.53 N
ATOM 15 C2 C A 35 -19.501 -13.114 25.543 1.00 38.92 C
ATOM 16 O2 C A 35 -18.279 -13.088 25.332 1.00 39.13 O
ATOM 17 N3 C A 35 -20.382 -13.418 24.561 1.00 38.90 N
ATOM 18 C4 C A 35 -21.692 -13.419 24.815 1.00 37.88 C
ATOM 19 N4 C A 35 -22.523 -13.709 23.810 1.00 36.77 N
ATOM 20 C5 C A 35 -22.207 -13.117 26.109 1.00 37.89 C
ATOM 21 C6 C A 35 -21.328 -12.825 27.076 1.00 37.68 C
ATOM 22 P C A 36 -18.956 -7.703 28.371 1.00 37.59 P
ATOM 23 OP1 C A 36 -18.310 -6.620 29.156 1.00 37.26 O
ATOM 24 OP2 C A 36 -20.393 -7.596 28.004 1.00 37.81 O
ATOM 25 O5' C A 36 -18.121 -7.891 27.028 1.00 36.91 O
TER
ATOM 1 O3' A B 32 -21.057 -20.485 31.835 1.00 50.45 O
ATOM 2 P G B 33 -22.652 -20.542 32.049 1.00 50.40 P
ATOM 3 OP1 G B 33 -22.872 -20.463 33.517 1.00 50.02 O
ATOM 4 OP2 G B 33 -23.182 -21.706 31.290 1.00 50.36 O
ATOM 5 O5' G B 33 -23.176 -19.204 31.348 1.00 49.07 O
ATOM 6 C5' G B 33 -24.191 -18.400 31.965 1.00 48.57 C
ATOM 7 C4' G B 33 -23.845 -16.927 31.876 1.00 48.44 C
ATOM 8 O4' G B 33 -22.410 -16.750 31.735 1.00 47.96 O
ATOM 9 C3' G B 33 -24.423 -16.142 30.707 1.00 48.59 C
ATOM 10 O3' G B 33 -25.765 -15.732 30.971 1.00 49.61 O
ATOM 11 C2' G B 33 -23.493 -14.935 30.619 1.00 48.06 C
ATOM 12 O2' G B 33 -23.855 -13.914 31.522 1.00 48.41 O
ATOM 13 C1' G B 33 -22.153 -15.525 31.067 1.00 47.71 C
ATOM 14 N9 G B 33 -21.174 -15.743 30.003 1.00 46.85 N
ATOM 15 C8 G B 33 -19.806 -15.723 30.137 1.00 46.34 C
ATOM 16 N7 G B 33 -19.176 -15.937 29.015 1.00 45.75 N
ATOM 17 C5 G B 33 -20.186 -16.112 28.078 1.00 45.89 C
ATOM 18 C6 G B 33 -20.115 -16.375 26.681 1.00 45.22 C
ATOM 19 O6 G B 33 -19.116 -16.514 25.976 1.00 45.43 O
ATOM 20 N1 G B 33 -21.379 -16.475 26.112 1.00 44.56 N
ATOM 21 C2 G B 33 -22.562 -16.338 26.790 1.00 44.91 C
ATOM 22 N2 G B 33 -23.671 -16.460 26.060 1.00 44.84 N
ATOM 23 N3 G B 33 -22.648 -16.095 28.089 1.00 46.20 N
ATOM 24 C4 G B 33 -21.426 -15.996 28.668 1.00 46.74 C
ATOM 25 P U B 34 -26.724 -15.290 29.751 1.00 50.47 P
ATOM 26 OP1 U B 34 -28.111 -15.187 30.263 1.00 50.67 O
ATOM 27 OP2 U B 34 -26.436 -16.182 28.591 1.00 50.13 O
ATOM 28 O5' U B 34 -26.225 -13.819 29.383 1.00 50.41 O
TER
ATOM 2 P C A 35 -23.561 -10.512 29.958 1.00 47.75 P
ATOM 3 OP1 C A 35 -24.348 -11.480 30.766 1.00 47.25 O
ATOM 4 OP2 C A 35 -23.305 -9.141 30.492 1.00 48.14 O
ATOM 5 O5' C A 35 -22.151 -11.177 29.617 1.00 46.35 O
ATOM 6 C5' C A 35 -21.032 -11.086 30.531 1.00 43.27 C
ATOM 7 C4' C A 35 -19.716 -11.261 29.786 1.00 41.41 C
ATOM 8 O4' C A 35 -19.693 -12.566 29.144 1.00 40.69 O
ATOM 9 C3' C A 35 -19.417 -10.270 28.665 1.00 39.87 C
ATOM 10 O3' C A 35 -18.779 -9.096 29.156 1.00 38.44 O
ATOM 11 C2' C A 35 -18.466 -11.056 27.776 1.00 39.46 C
ATOM 12 O2' C A 35 -17.158 -11.034 28.302 1.00 39.45 O
ATOM 13 C1' C A 35 -19.023 -12.475 27.899 1.00 39.49 C
ATOM 14 N1 C A 35 -19.984 -12.812 26.829 1.00 38.53 N
ATOM 15 C2 C A 35 -19.501 -13.114 25.543 1.00 38.92 C
ATOM 16 O2 C A 35 -18.279 -13.088 25.332 1.00 39.13 O
ATOM 17 N3 C A 35 -20.382 -13.418 24.561 1.00 38.90 N
ATOM 18 C4 C A 35 -21.692 -13.419 24.815 1.00 37.88 C
ATOM 19 N4 C A 35 -22.523 -13.709 23.810 1.00 36.77 N
ATOM 20 C5 C A 35 -22.207 -13.117 26.109 1.00 37.89 C
ATOM 21 C6 C A 35 -21.328 -12.825 27.076 1.00 37.68 C
ATOM 22 P C A 36 -18.956 -7.703 28.371 1.00 37.59 P
ATOM 23 OP1 C A 36 -18.310 -6.620 29.156 1.00 37.26 O
ATOM 24 OP2 C A 36 -20.393 -7.596 28.004 1.00 37.81 O
ATOM 25 O5' C A 36 -18.121 -7.891 27.028 1.00 36.91 O
TER
ATOM 1 O3' A B 32 -21.057 -20.485 31.835 1.00 50.45 O
ATOM 2 P G B 33 -22.652 -20.542 32.049 1.00 50.40 P
ATOM 3 OP1 G B 33 -22.872 -20.463 33.517 1.00 50.02 O
ATOM 4 OP2 G B 33 -23.182 -21.706 31.290 1.00 50.36 O
ATOM 5 O5' G B 33 -23.176 -19.204 31.348 1.00 49.07 O
ATOM 6 C5' G B 33 -24.191 -18.400 31.965 1.00 48.57 C
ATOM 7 C4' G B 33 -23.845 -16.927 31.876 1.00 48.44 C
ATOM 8 O4' G B 33 -22.410 -16.750 31.735 1.00 47.96 O
ATOM 9 C3' G B 33 -24.423 -16.142 30.707 1.00 48.59 C
ATOM 10 O3' G B 33 -25.765 -15.732 30.971 1.00 49.61 O
ATOM 11 C2' G B 33 -23.493 -14.935 30.619 1.00 48.06 C
ATOM 12 O2' G B 33 -23.855 -13.914 31.522 1.00 48.41 O
ATOM 13 C1' G B 33 -22.153 -15.525 31.067 1.00 47.71 C
ATOM 14 N9 G B 33 -21.174 -15.743 30.003 1.00 46.85 N
ATOM 15 C8 G B 33 -19.806 -15.723 30.137 1.00 46.34 C
ATOM 16 N7 G B 33 -19.176 -15.937 29.015 1.00 45.75 N
ATOM 17 C5 G B 33 -20.186 -16.112 28.078 1.00 45.89 C
ATOM 18 C6 G B 33 -20.115 -16.375 26.681 1.00 45.22 C
ATOM 19 O6 G B 33 -19.116 -16.514 25.976 1.00 45.43 O
ATOM 20 N1 G B 33 -21.379 -16.475 26.112 1.00 44.56 N
ATOM 21 C2 G B 33 -22.562 -16.338 26.790 1.00 44.91 C
ATOM 22 N2 G B 33 -23.671 -16.460 26.060 1.00 44.84 N
ATOM 23 N3 G B 33 -22.648 -16.095 28.089 1.00 46.20 N
ATOM 24 C4 G B 33 -21.426 -15.996 28.668 1.00 46.74 C
ATOM 25 P U B 34 -26.724 -15.290 29.751 1.00 50.47 P
ATOM 26 OP1 U B 34 -28.111 -15.187 30.263 1.00 50.67 O
ATOM 27 OP2 U B 34 -26.436 -16.182 28.591 1.00 50.13 O
ATOM 28 O5' U B 34 -26.225 -13.819 29.383 1.00 50.41 O
TER
Atoms:
C2: (-19.501,-13.114,25.543)
OP1: (-24.348,-11.480,30.766)
OP2: (-23.305,-9.141,30.492)
C4: (-21.692,-13.419,24.815)
O5': (-22.151,-11.177,29.617)
C3': (-19.417,-10.270,28.665)
C1': (-19.023,-12.475,27.899)
O4': (-19.693,-12.566,29.144)
C5': (-21.032,-11.086,30.531)
P: (-23.561,-10.512,29.958)
O2: (-18.279,-13.088,25.332)
C4': (-19.716,-11.261,29.786)
C2': (-18.466,-11.056,27.776)
O2': (-17.158,-11.034,28.302)
N1: (-19.984,-12.812,26.829)
N3: (-20.382,-13.418,24.561)
N4: (-22.523,-13.709,23.810)
C6: (-21.328,-12.825,27.076)
C5: (-22.207,-13.117,26.109)
O3': (-18.779,-9.096,29.156)
OP1: (-24.348,-11.480,30.766)
OP2: (-23.305,-9.141,30.492)
C4: (-21.692,-13.419,24.815)
O5': (-22.151,-11.177,29.617)
C3': (-19.417,-10.270,28.665)
C1': (-19.023,-12.475,27.899)
O4': (-19.693,-12.566,29.144)
C5': (-21.032,-11.086,30.531)
P: (-23.561,-10.512,29.958)
O2: (-18.279,-13.088,25.332)
C4': (-19.716,-11.261,29.786)
C2': (-18.466,-11.056,27.776)
O2': (-17.158,-11.034,28.302)
N1: (-19.984,-12.812,26.829)
N3: (-20.382,-13.418,24.561)
N4: (-22.523,-13.709,23.810)
C6: (-21.328,-12.825,27.076)
C5: (-22.207,-13.117,26.109)
O3': (-18.779,-9.096,29.156)
OP1: (-22.872,-20.463,33.517)
OP2: (-23.182,-21.706,31.290)
C3': (-24.423,-16.142,30.707)
C1': (-22.153,-15.525,31.067)
C5': (-24.191,-18.400,31.965)
O6: (-19.116,-16.514,25.976)
O4': (-22.410,-16.750,31.735)
C8: (-19.806,-15.723,30.137)
C2: (-22.562,-16.338,26.790)
C6: (-20.115,-16.375,26.681)
C5: (-20.186,-16.112,28.078)
C4: (-21.426,-15.996,28.668)
P: (-22.652,-20.542,32.049)
C4': (-23.845,-16.927,31.876)
C2': (-23.493,-14.935,30.619)
O2': (-23.855,-13.914,31.522)
N1: (-21.379,-16.475,26.112)
N2: (-23.671,-16.460,26.060)
N3: (-22.648,-16.095,28.089)
N7: (-19.176,-15.937,29.015)
N9: (-21.174,-15.743,30.003)
O5': (-23.176,-19.204,31.348)
O3': (-25.765,-15.732,30.971)
OP2: (-23.182,-21.706,31.290)
C3': (-24.423,-16.142,30.707)
C1': (-22.153,-15.525,31.067)
C5': (-24.191,-18.400,31.965)
O6: (-19.116,-16.514,25.976)
O4': (-22.410,-16.750,31.735)
C8: (-19.806,-15.723,30.137)
C2: (-22.562,-16.338,26.790)
C6: (-20.115,-16.375,26.681)
C5: (-20.186,-16.112,28.078)
C4: (-21.426,-15.996,28.668)
P: (-22.652,-20.542,32.049)
C4': (-23.845,-16.927,31.876)
C2': (-23.493,-14.935,30.619)
O2': (-23.855,-13.914,31.522)
N1: (-21.379,-16.475,26.112)
N2: (-23.671,-16.460,26.060)
N3: (-22.648,-16.095,28.089)
N7: (-19.176,-15.937,29.015)
N9: (-21.174,-15.743,30.003)
O5': (-23.176,-19.204,31.348)
O3': (-25.765,-15.732,30.971)
Image (generated by PyMOL):