Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A117:A119
Extra
PDB:
ATOM 1 O3' G A 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 2 P A A 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 3 OP1 A A 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 4 OP2 A A 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 5 O5' A A 117 -34.396 -49.071 53.948 1.00 0.01 O
ATOM 6 C5' A A 117 -35.591 -49.729 54.299 1.00 0.01 C
ATOM 7 C4' A A 117 -36.118 -49.224 55.604 1.00 0.01 C
ATOM 8 O4' A A 117 -35.883 -50.191 56.650 1.00 0.01 O
ATOM 9 C3' A A 117 -35.459 -47.972 56.130 1.00 0.01 C
ATOM 10 O3' A A 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 11 C2' A A 117 -35.761 -48.024 57.619 1.00 0.01 C
ATOM 12 O2' A A 117 -37.026 -47.475 57.890 1.00 0.01 O
ATOM 13 C1' A A 117 -35.835 -49.521 57.890 1.00 0.01 C
ATOM 14 N9 A A 117 -34.696 -49.998 58.675 1.00 0.10 N
ATOM 15 C8 A A 117 -33.427 -49.507 58.802 1.00 0.10 C
ATOM 16 N7 A A 117 -32.701 -50.191 59.655 1.00 0.10 N
ATOM 17 C5 A A 117 -33.559 -51.157 60.126 1.00 0.10 C
ATOM 18 C6 A A 117 -33.418 -52.191 61.038 1.00 0.10 C
ATOM 19 N6 A A 117 -32.302 -52.468 61.686 1.00 0.10 N
ATOM 20 N1 A A 117 -34.460 -52.975 61.275 1.00 0.10 N
ATOM 21 C2 A A 117 -35.578 -52.726 60.615 1.00 0.10 C
ATOM 22 N3 A A 117 -35.852 -51.784 59.728 1.00 0.10 N
ATOM 23 C4 A A 117 -34.783 -51.030 59.537 1.00 0.10 C
ATOM 24 P A A 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 25 OP1 A A 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 26 OP2 A A 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 27 O5' A A 118 -33.726 -45.893 56.115 1.00 0.01 O
TER
ATOM 1 O3' A B 118 -29.058 -46.255 55.323 1.00 0.01 O
ATOM 2 P U B 119 -28.683 -44.704 55.191 1.00 0.01 P
ATOM 3 OP1 U B 119 -29.443 -44.186 54.047 1.00 0.01 O
ATOM 4 OP2 U B 119 -27.234 -44.608 55.172 1.00 0.01 O
ATOM 5 O5' U B 119 -29.249 -44.078 56.545 1.00 0.01 O
ATOM 6 C5' U B 119 -28.680 -42.909 57.110 1.00 0.01 C
ATOM 7 C4' U B 119 -28.326 -43.119 58.558 1.00 0.01 C
ATOM 8 O4' U B 119 -29.542 -43.254 59.334 1.00 0.01 O
ATOM 9 C3' U B 119 -27.523 -44.379 58.855 1.00 0.01 C
ATOM 10 O3' U B 119 -26.755 -44.153 60.031 1.00 0.01 O
ATOM 11 C2' U B 119 -28.621 -45.385 59.164 1.00 0.01 C
ATOM 12 O2' U B 119 -28.194 -46.525 59.874 1.00 0.01 O
ATOM 13 C1' U B 119 -29.543 -44.506 59.988 1.00 0.01 C
ATOM 14 N1 U B 119 -30.927 -44.969 60.085 1.00 0.01 N
ATOM 15 C2 U B 119 -31.190 -45.838 61.066 1.00 0.01 C
ATOM 16 O2 U B 119 -30.322 -46.254 61.765 1.00 0.01 O
ATOM 17 N3 U B 119 -32.457 -46.232 61.184 1.00 0.01 N
ATOM 18 C4 U B 119 -33.508 -45.823 60.437 1.00 0.01 C
ATOM 19 O4 U B 119 -34.622 -46.293 60.666 1.00 0.01 O
ATOM 20 C5 U B 119 -33.182 -44.876 59.430 1.00 0.01 C
ATOM 21 C6 U B 119 -31.920 -44.481 59.304 1.00 0.01 C
ATOM 22 P G B 120 -25.160 -44.251 60.003 1.00 0.87 P
ATOM 23 OP1 G B 120 -24.799 -45.309 59.061 1.00 0.87 O
ATOM 24 OP2 G B 120 -24.730 -44.372 61.416 1.00 0.87 O
ATOM 25 O5' G B 120 -24.720 -42.856 59.416 1.00 0.87 O
TER
ATOM 2 P A A 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 3 OP1 A A 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 4 OP2 A A 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 5 O5' A A 117 -34.396 -49.071 53.948 1.00 0.01 O
ATOM 6 C5' A A 117 -35.591 -49.729 54.299 1.00 0.01 C
ATOM 7 C4' A A 117 -36.118 -49.224 55.604 1.00 0.01 C
ATOM 8 O4' A A 117 -35.883 -50.191 56.650 1.00 0.01 O
ATOM 9 C3' A A 117 -35.459 -47.972 56.130 1.00 0.01 C
ATOM 10 O3' A A 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 11 C2' A A 117 -35.761 -48.024 57.619 1.00 0.01 C
ATOM 12 O2' A A 117 -37.026 -47.475 57.890 1.00 0.01 O
ATOM 13 C1' A A 117 -35.835 -49.521 57.890 1.00 0.01 C
ATOM 14 N9 A A 117 -34.696 -49.998 58.675 1.00 0.10 N
ATOM 15 C8 A A 117 -33.427 -49.507 58.802 1.00 0.10 C
ATOM 16 N7 A A 117 -32.701 -50.191 59.655 1.00 0.10 N
ATOM 17 C5 A A 117 -33.559 -51.157 60.126 1.00 0.10 C
ATOM 18 C6 A A 117 -33.418 -52.191 61.038 1.00 0.10 C
ATOM 19 N6 A A 117 -32.302 -52.468 61.686 1.00 0.10 N
ATOM 20 N1 A A 117 -34.460 -52.975 61.275 1.00 0.10 N
ATOM 21 C2 A A 117 -35.578 -52.726 60.615 1.00 0.10 C
ATOM 22 N3 A A 117 -35.852 -51.784 59.728 1.00 0.10 N
ATOM 23 C4 A A 117 -34.783 -51.030 59.537 1.00 0.10 C
ATOM 24 P A A 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 25 OP1 A A 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 26 OP2 A A 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 27 O5' A A 118 -33.726 -45.893 56.115 1.00 0.01 O
TER
ATOM 1 O3' A B 118 -29.058 -46.255 55.323 1.00 0.01 O
ATOM 2 P U B 119 -28.683 -44.704 55.191 1.00 0.01 P
ATOM 3 OP1 U B 119 -29.443 -44.186 54.047 1.00 0.01 O
ATOM 4 OP2 U B 119 -27.234 -44.608 55.172 1.00 0.01 O
ATOM 5 O5' U B 119 -29.249 -44.078 56.545 1.00 0.01 O
ATOM 6 C5' U B 119 -28.680 -42.909 57.110 1.00 0.01 C
ATOM 7 C4' U B 119 -28.326 -43.119 58.558 1.00 0.01 C
ATOM 8 O4' U B 119 -29.542 -43.254 59.334 1.00 0.01 O
ATOM 9 C3' U B 119 -27.523 -44.379 58.855 1.00 0.01 C
ATOM 10 O3' U B 119 -26.755 -44.153 60.031 1.00 0.01 O
ATOM 11 C2' U B 119 -28.621 -45.385 59.164 1.00 0.01 C
ATOM 12 O2' U B 119 -28.194 -46.525 59.874 1.00 0.01 O
ATOM 13 C1' U B 119 -29.543 -44.506 59.988 1.00 0.01 C
ATOM 14 N1 U B 119 -30.927 -44.969 60.085 1.00 0.01 N
ATOM 15 C2 U B 119 -31.190 -45.838 61.066 1.00 0.01 C
ATOM 16 O2 U B 119 -30.322 -46.254 61.765 1.00 0.01 O
ATOM 17 N3 U B 119 -32.457 -46.232 61.184 1.00 0.01 N
ATOM 18 C4 U B 119 -33.508 -45.823 60.437 1.00 0.01 C
ATOM 19 O4 U B 119 -34.622 -46.293 60.666 1.00 0.01 O
ATOM 20 C5 U B 119 -33.182 -44.876 59.430 1.00 0.01 C
ATOM 21 C6 U B 119 -31.920 -44.481 59.304 1.00 0.01 C
ATOM 22 P G B 120 -25.160 -44.251 60.003 1.00 0.87 P
ATOM 23 OP1 G B 120 -24.799 -45.309 59.061 1.00 0.87 O
ATOM 24 OP2 G B 120 -24.730 -44.372 61.416 1.00 0.87 O
ATOM 25 O5' G B 120 -24.720 -42.856 59.416 1.00 0.87 O
TER
Atoms:
OP1: (-34.995,-48.159,51.707)
OP2: (-32.570,-48.538,52.334)
C3': (-35.459,-47.972,56.130)
C1': (-35.835,-49.521,57.890)
C5': (-35.591,-49.729,54.299)
O4': (-35.883,-50.191,56.650)
C8: (-33.427,-49.507,58.802)
O2': (-37.026,-47.475,57.890)
C6: (-33.418,-52.191,61.038)
C5: (-33.559,-51.157,60.126)
C4: (-34.783,-51.030,59.537)
P: (-33.975,-48.932,52.434)
C4': (-36.118,-49.224,55.604)
C2': (-35.761,-48.024,57.619)
C2: (-35.578,-52.726,60.615)
N1: (-34.460,-52.975,61.275)
N3: (-35.852,-51.784,59.728)
N6: (-32.302,-52.468,61.686)
N7: (-32.701,-50.191,59.655)
N9: (-34.696,-49.998,58.675)
O5': (-34.396,-49.071,53.948)
O3': (-35.942,-46.812,55.506)
OP2: (-32.570,-48.538,52.334)
C3': (-35.459,-47.972,56.130)
C1': (-35.835,-49.521,57.890)
C5': (-35.591,-49.729,54.299)
O4': (-35.883,-50.191,56.650)
C8: (-33.427,-49.507,58.802)
O2': (-37.026,-47.475,57.890)
C6: (-33.418,-52.191,61.038)
C5: (-33.559,-51.157,60.126)
C4: (-34.783,-51.030,59.537)
P: (-33.975,-48.932,52.434)
C4': (-36.118,-49.224,55.604)
C2': (-35.761,-48.024,57.619)
C2: (-35.578,-52.726,60.615)
N1: (-34.460,-52.975,61.275)
N3: (-35.852,-51.784,59.728)
N6: (-32.302,-52.468,61.686)
N7: (-32.701,-50.191,59.655)
N9: (-34.696,-49.998,58.675)
O5': (-34.396,-49.071,53.948)
O3': (-35.942,-46.812,55.506)
C4: (-33.508,-45.823,60.437)
N3: (-32.457,-46.232,61.184)
OP1: (-29.443,-44.186,54.047)
OP2: (-27.234,-44.608,55.172)
C2: (-31.190,-45.838,61.066)
C1': (-29.543,-44.506,59.988)
C3': (-27.523,-44.379,58.855)
O5': (-29.249,-44.078,56.545)
O4': (-29.542,-43.254,59.334)
C5': (-28.680,-42.909,57.110)
P: (-28.683,-44.704,55.191)
C4': (-28.326,-43.119,58.558)
C2': (-28.621,-45.385,59.164)
O2': (-28.194,-46.525,59.874)
N1: (-30.927,-44.969,60.085)
O4: (-34.622,-46.293,60.666)
O2: (-30.322,-46.254,61.765)
C6: (-31.920,-44.481,59.304)
C5: (-33.182,-44.876,59.430)
O3': (-26.755,-44.153,60.031)
N3: (-32.457,-46.232,61.184)
OP1: (-29.443,-44.186,54.047)
OP2: (-27.234,-44.608,55.172)
C2: (-31.190,-45.838,61.066)
C1': (-29.543,-44.506,59.988)
C3': (-27.523,-44.379,58.855)
O5': (-29.249,-44.078,56.545)
O4': (-29.542,-43.254,59.334)
C5': (-28.680,-42.909,57.110)
P: (-28.683,-44.704,55.191)
C4': (-28.326,-43.119,58.558)
C2': (-28.621,-45.385,59.164)
O2': (-28.194,-46.525,59.874)
N1: (-30.927,-44.969,60.085)
O4: (-34.622,-46.293,60.666)
O2: (-30.322,-46.254,61.765)
C6: (-31.920,-44.481,59.304)
C5: (-33.182,-44.876,59.430)
O3': (-26.755,-44.153,60.031)
Image (generated by PyMOL):