Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2512:A2559
Extra
PDB:
ATOM 1 O3' U A2511 -63.608 89.087 162.383 1.00 1.12 O
ATOM 2 P C A2512 -63.704 89.207 160.772 1.00 0.01 P
ATOM 3 OP1 C A2512 -63.155 90.541 160.388 1.00 0.01 O
ATOM 4 OP2 C A2512 -65.099 88.874 160.398 1.00 0.01 O
ATOM 5 O5' C A2512 -62.727 88.064 160.272 1.00 0.01 O
ATOM 6 C5' C A2512 -61.993 88.223 159.089 1.00 0.01 C
ATOM 7 C4' C A2512 -60.673 87.563 159.208 1.00 0.01 C
ATOM 8 O4' C A2512 -59.746 88.450 159.864 1.00 0.01 O
ATOM 9 C3' C A2512 -60.650 86.322 160.062 1.00 0.01 C
ATOM 10 O3' C A2512 -61.118 85.196 159.382 1.00 0.01 O
ATOM 11 C2' C A2512 -59.194 86.220 160.450 1.00 0.01 C
ATOM 12 O2' C A2512 -58.427 85.648 159.399 1.00 0.01 O
ATOM 13 C1' C A2512 -58.824 87.697 160.609 1.00 0.01 C
ATOM 14 N1 C A2512 -58.930 88.102 161.981 1.00 0.01 N
ATOM 15 C2 C A2512 -57.846 87.830 162.782 1.00 0.01 C
ATOM 16 O2 C A2512 -56.868 87.323 162.232 1.00 0.01 O
ATOM 17 N3 C A2512 -57.914 88.159 164.092 1.00 0.01 N
ATOM 18 C4 C A2512 -59.040 88.718 164.559 1.00 0.01 C
ATOM 19 N4 C A2512 -59.101 89.039 165.838 1.00 0.01 N
ATOM 20 C5 C A2512 -60.175 88.982 163.751 1.00 0.01 C
ATOM 21 C6 C A2512 -60.077 88.650 162.461 1.00 0.01 C
ATOM 22 P C A2513 -61.709 83.954 160.194 1.00 0.58 P
ATOM 23 OP1 C A2513 -62.135 82.959 159.180 1.00 0.58 O
ATOM 24 OP2 C A2513 -62.726 84.491 161.149 1.00 0.58 O
ATOM 25 O5' C A2513 -60.435 83.409 160.969 1.00 0.58 O
TER
ATOM 1 O3' A B2558 -52.947 89.931 158.198 1.00 0.66 O
ATOM 2 P G B2559 -53.290 91.496 158.302 1.00 0.78 P
ATOM 3 OP1 G B2559 -52.887 92.121 157.002 1.00 0.78 O
ATOM 4 OP2 G B2559 -52.650 91.967 159.588 1.00 0.78 O
ATOM 5 O5' G B2559 -54.878 91.512 158.460 1.00 0.78 O
ATOM 6 C5' G B2559 -55.465 91.015 159.655 1.00 0.78 C
ATOM 7 C4' G B2559 -56.930 91.306 159.729 1.00 0.78 C
ATOM 8 O4' G B2559 -57.517 90.567 160.828 1.00 0.78 O
ATOM 9 C3' G B2559 -57.291 92.756 159.985 1.00 0.78 C
ATOM 10 O3' G B2559 -57.362 93.482 158.787 1.00 0.78 O
ATOM 11 C2' G B2559 -58.626 92.667 160.717 1.00 0.78 C
ATOM 12 O2' G B2559 -59.717 92.547 159.802 1.00 0.78 O
ATOM 13 C1' G B2559 -58.476 91.355 161.491 1.00 0.78 C
ATOM 14 N9 G B2559 -58.019 91.556 162.884 1.00 0.56 N
ATOM 15 C8 G B2559 -56.864 91.026 163.414 1.00 0.56 C
ATOM 16 N7 G B2559 -56.681 91.304 164.676 1.00 0.56 N
ATOM 17 C5 G B2559 -57.792 92.057 165.002 1.00 0.56 C
ATOM 18 C6 G B2559 -58.138 92.636 166.238 1.00 0.56 C
ATOM 19 O6 G B2559 -57.493 92.587 167.309 1.00 0.56 O
ATOM 20 N1 G B2559 -59.343 93.328 166.130 1.00 0.56 N
ATOM 21 C2 G B2559 -60.098 93.430 164.996 1.00 0.56 C
ATOM 22 N2 G B2559 -61.234 94.124 165.071 1.00 0.56 N
ATOM 23 N3 G B2559 -59.779 92.887 163.852 1.00 0.56 N
ATOM 24 C4 G B2559 -58.624 92.222 163.922 1.00 0.56 C
ATOM 25 P U B2560 -56.522 94.823 158.578 1.00 0.02 P
ATOM 26 OP1 U B2560 -56.137 94.859 157.161 1.00 0.02 O
ATOM 27 OP2 U B2560 -55.451 94.869 159.614 1.00 0.02 O
ATOM 28 O5' U B2560 -57.620 95.923 158.863 1.00 0.02 O
TER
ATOM 2 P C A2512 -63.704 89.207 160.772 1.00 0.01 P
ATOM 3 OP1 C A2512 -63.155 90.541 160.388 1.00 0.01 O
ATOM 4 OP2 C A2512 -65.099 88.874 160.398 1.00 0.01 O
ATOM 5 O5' C A2512 -62.727 88.064 160.272 1.00 0.01 O
ATOM 6 C5' C A2512 -61.993 88.223 159.089 1.00 0.01 C
ATOM 7 C4' C A2512 -60.673 87.563 159.208 1.00 0.01 C
ATOM 8 O4' C A2512 -59.746 88.450 159.864 1.00 0.01 O
ATOM 9 C3' C A2512 -60.650 86.322 160.062 1.00 0.01 C
ATOM 10 O3' C A2512 -61.118 85.196 159.382 1.00 0.01 O
ATOM 11 C2' C A2512 -59.194 86.220 160.450 1.00 0.01 C
ATOM 12 O2' C A2512 -58.427 85.648 159.399 1.00 0.01 O
ATOM 13 C1' C A2512 -58.824 87.697 160.609 1.00 0.01 C
ATOM 14 N1 C A2512 -58.930 88.102 161.981 1.00 0.01 N
ATOM 15 C2 C A2512 -57.846 87.830 162.782 1.00 0.01 C
ATOM 16 O2 C A2512 -56.868 87.323 162.232 1.00 0.01 O
ATOM 17 N3 C A2512 -57.914 88.159 164.092 1.00 0.01 N
ATOM 18 C4 C A2512 -59.040 88.718 164.559 1.00 0.01 C
ATOM 19 N4 C A2512 -59.101 89.039 165.838 1.00 0.01 N
ATOM 20 C5 C A2512 -60.175 88.982 163.751 1.00 0.01 C
ATOM 21 C6 C A2512 -60.077 88.650 162.461 1.00 0.01 C
ATOM 22 P C A2513 -61.709 83.954 160.194 1.00 0.58 P
ATOM 23 OP1 C A2513 -62.135 82.959 159.180 1.00 0.58 O
ATOM 24 OP2 C A2513 -62.726 84.491 161.149 1.00 0.58 O
ATOM 25 O5' C A2513 -60.435 83.409 160.969 1.00 0.58 O
TER
ATOM 1 O3' A B2558 -52.947 89.931 158.198 1.00 0.66 O
ATOM 2 P G B2559 -53.290 91.496 158.302 1.00 0.78 P
ATOM 3 OP1 G B2559 -52.887 92.121 157.002 1.00 0.78 O
ATOM 4 OP2 G B2559 -52.650 91.967 159.588 1.00 0.78 O
ATOM 5 O5' G B2559 -54.878 91.512 158.460 1.00 0.78 O
ATOM 6 C5' G B2559 -55.465 91.015 159.655 1.00 0.78 C
ATOM 7 C4' G B2559 -56.930 91.306 159.729 1.00 0.78 C
ATOM 8 O4' G B2559 -57.517 90.567 160.828 1.00 0.78 O
ATOM 9 C3' G B2559 -57.291 92.756 159.985 1.00 0.78 C
ATOM 10 O3' G B2559 -57.362 93.482 158.787 1.00 0.78 O
ATOM 11 C2' G B2559 -58.626 92.667 160.717 1.00 0.78 C
ATOM 12 O2' G B2559 -59.717 92.547 159.802 1.00 0.78 O
ATOM 13 C1' G B2559 -58.476 91.355 161.491 1.00 0.78 C
ATOM 14 N9 G B2559 -58.019 91.556 162.884 1.00 0.56 N
ATOM 15 C8 G B2559 -56.864 91.026 163.414 1.00 0.56 C
ATOM 16 N7 G B2559 -56.681 91.304 164.676 1.00 0.56 N
ATOM 17 C5 G B2559 -57.792 92.057 165.002 1.00 0.56 C
ATOM 18 C6 G B2559 -58.138 92.636 166.238 1.00 0.56 C
ATOM 19 O6 G B2559 -57.493 92.587 167.309 1.00 0.56 O
ATOM 20 N1 G B2559 -59.343 93.328 166.130 1.00 0.56 N
ATOM 21 C2 G B2559 -60.098 93.430 164.996 1.00 0.56 C
ATOM 22 N2 G B2559 -61.234 94.124 165.071 1.00 0.56 N
ATOM 23 N3 G B2559 -59.779 92.887 163.852 1.00 0.56 N
ATOM 24 C4 G B2559 -58.624 92.222 163.922 1.00 0.56 C
ATOM 25 P U B2560 -56.522 94.823 158.578 1.00 0.02 P
ATOM 26 OP1 U B2560 -56.137 94.859 157.161 1.00 0.02 O
ATOM 27 OP2 U B2560 -55.451 94.869 159.614 1.00 0.02 O
ATOM 28 O5' U B2560 -57.620 95.923 158.863 1.00 0.02 O
TER
Atoms:
C2: (-57.846,87.830,162.782)
OP1: (-63.155,90.541,160.388)
OP2: (-65.099,88.874,160.398)
C4: (-59.040,88.718,164.559)
O5': (-62.727,88.064,160.272)
C3': (-60.650,86.322,160.062)
C1': (-58.824,87.697,160.609)
O4': (-59.746,88.450,159.864)
C5': (-61.993,88.223,159.089)
P: (-63.704,89.207,160.772)
O2: (-56.868,87.323,162.232)
C4': (-60.673,87.563,159.208)
C2': (-59.194,86.220,160.450)
O2': (-58.427,85.648,159.399)
N1: (-58.930,88.102,161.981)
N3: (-57.914,88.159,164.092)
N4: (-59.101,89.039,165.838)
C6: (-60.077,88.650,162.461)
C5: (-60.175,88.982,163.751)
O3': (-61.118,85.196,159.382)
OP1: (-63.155,90.541,160.388)
OP2: (-65.099,88.874,160.398)
C4: (-59.040,88.718,164.559)
O5': (-62.727,88.064,160.272)
C3': (-60.650,86.322,160.062)
C1': (-58.824,87.697,160.609)
O4': (-59.746,88.450,159.864)
C5': (-61.993,88.223,159.089)
P: (-63.704,89.207,160.772)
O2: (-56.868,87.323,162.232)
C4': (-60.673,87.563,159.208)
C2': (-59.194,86.220,160.450)
O2': (-58.427,85.648,159.399)
N1: (-58.930,88.102,161.981)
N3: (-57.914,88.159,164.092)
N4: (-59.101,89.039,165.838)
C6: (-60.077,88.650,162.461)
C5: (-60.175,88.982,163.751)
O3': (-61.118,85.196,159.382)
OP1: (-52.887,92.121,157.002)
OP2: (-52.650,91.967,159.588)
C3': (-57.291,92.756,159.985)
C1': (-58.476,91.355,161.491)
C5': (-55.465,91.015,159.655)
O6: (-57.493,92.587,167.309)
O4': (-57.517,90.567,160.828)
C8: (-56.864,91.026,163.414)
C2: (-60.098,93.430,164.996)
C6: (-58.138,92.636,166.238)
C5: (-57.792,92.057,165.002)
C4: (-58.624,92.222,163.922)
P: (-53.290,91.496,158.302)
C4': (-56.930,91.306,159.729)
C2': (-58.626,92.667,160.717)
O2': (-59.717,92.547,159.802)
N1: (-59.343,93.328,166.130)
N2: (-61.234,94.124,165.071)
N3: (-59.779,92.887,163.852)
N7: (-56.681,91.304,164.676)
N9: (-58.019,91.556,162.884)
O5': (-54.878,91.512,158.460)
O3': (-57.362,93.482,158.787)
OP2: (-52.650,91.967,159.588)
C3': (-57.291,92.756,159.985)
C1': (-58.476,91.355,161.491)
C5': (-55.465,91.015,159.655)
O6: (-57.493,92.587,167.309)
O4': (-57.517,90.567,160.828)
C8: (-56.864,91.026,163.414)
C2: (-60.098,93.430,164.996)
C6: (-58.138,92.636,166.238)
C5: (-57.792,92.057,165.002)
C4: (-58.624,92.222,163.922)
P: (-53.290,91.496,158.302)
C4': (-56.930,91.306,159.729)
C2': (-58.626,92.667,160.717)
O2': (-59.717,92.547,159.802)
N1: (-59.343,93.328,166.130)
N2: (-61.234,94.124,165.071)
N3: (-59.779,92.887,163.852)
N7: (-56.681,91.304,164.676)
N9: (-58.019,91.556,162.884)
O5': (-54.878,91.512,158.460)
O3': (-57.362,93.482,158.787)
Image (generated by PyMOL):