Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1043:A1041
Extra
PDB:
ATOM 1 O3' U A1042 -71.750 109.249 58.399 1.00 61.16 O
ATOM 2 P C A1043 -70.440 110.130 58.056 1.00 89.66 P
ATOM 3 OP1 C A1043 -70.572 111.343 58.902 1.00116.67 O
ATOM 4 OP2 C A1043 -70.266 110.284 56.584 1.00118.81 O
ATOM 5 O5' C A1043 -69.225 109.289 58.652 1.00 34.45 O
ATOM 6 C5' C A1043 -67.927 109.299 58.021 1.00 32.42 C
ATOM 7 C4' C A1043 -66.844 109.019 59.041 1.00 30.04 C
ATOM 8 O4' C A1043 -67.259 107.967 59.949 1.00 29.74 O
ATOM 9 C3' C A1043 -65.534 108.546 58.438 1.00 28.67 C
ATOM 10 O3' C A1043 -64.724 109.668 58.115 1.00 28.30 O
ATOM 11 C2' C A1043 -64.917 107.700 59.552 1.00 29.67 C
ATOM 12 O2' C A1043 -64.182 108.445 60.500 1.00 30.93 O
ATOM 13 C1' C A1043 -66.153 107.129 60.255 1.00 30.46 C
ATOM 14 N1 C A1043 -66.497 105.737 59.893 1.00 60.29 N
ATOM 15 C2 C A1043 -65.532 104.733 60.023 1.00 62.15 C
ATOM 16 O2 C A1043 -64.399 105.031 60.416 1.00 64.43 O
ATOM 17 N3 C A1043 -65.860 103.460 59.712 1.00 63.79 N
ATOM 18 C4 C A1043 -67.091 103.172 59.284 1.00 62.47 C
ATOM 19 N4 C A1043 -67.381 101.903 58.997 1.00 61.33 N
ATOM 20 C5 C A1043 -68.085 104.172 59.135 1.00 62.63 C
ATOM 21 C6 C A1043 -67.750 105.427 59.446 1.00 61.38 C
ATOM 22 P A A1044 -64.123 109.814 56.641 1.00111.63 P
ATOM 23 OP1 A A1044 -63.225 111.001 56.619 1.00 84.64 O
ATOM 24 OP2 A A1044 -65.276 109.748 55.706 1.00 86.43 O
ATOM 25 O5' A A1044 -63.235 108.502 56.468 1.00 62.20 O
TER
ATOM 1 O3' C B1040 -66.299 106.453 66.886 1.00 7.06 O
ATOM 2 P G B1041 -65.813 107.078 65.484 1.00115.73 P
ATOM 3 OP1 G B1041 -64.649 106.279 65.018 1.00 79.60 O
ATOM 4 OP2 G B1041 -65.657 108.544 65.696 1.00 79.60 O
ATOM 5 O5' G B1041 -67.038 106.840 64.490 1.00 59.09 O
ATOM 6 C5' G B1041 -67.335 107.780 63.425 1.00 59.09 C
ATOM 7 C4' G B1041 -68.691 107.480 62.812 1.00 59.09 C
ATOM 8 O4' G B1041 -68.592 106.302 61.970 1.00 59.09 O
ATOM 9 C3' G B1041 -69.809 107.208 63.806 1.00 59.09 C
ATOM 10 O3' G B1041 -70.959 108.064 63.538 1.00 59.09 O
ATOM 11 C2' G B1041 -69.844 105.674 63.886 1.00 59.09 C
ATOM 12 O2' G B1041 -71.020 105.029 64.314 1.00 59.09 O
ATOM 13 C1' G B1041 -69.361 105.238 62.503 1.00 59.09 C
ATOM 14 N9 G B1041 -68.479 104.072 62.567 1.00 61.59 N
ATOM 15 C8 G B1041 -67.172 104.063 62.995 1.00 61.59 C
ATOM 16 N7 G B1041 -66.609 102.889 62.915 1.00 61.59 N
ATOM 17 C5 G B1041 -67.603 102.067 62.409 1.00 61.59 C
ATOM 18 C6 G B1041 -67.574 100.688 62.102 1.00 61.59 C
ATOM 19 O6 G B1041 -66.638 99.895 62.221 1.00 61.59 O
ATOM 20 N1 G B1041 -68.795 100.250 61.609 1.00 61.59 N
ATOM 21 C2 G B1041 -69.902 101.038 61.438 1.00 61.59 C
ATOM 22 N2 G B1041 -70.984 100.426 60.962 1.00 61.59 N
ATOM 23 N3 G B1041 -69.945 102.331 61.717 1.00 61.59 N
ATOM 24 C4 G B1041 -68.768 102.778 62.196 1.00 61.59 C
ATOM 25 P U B1042 -72.240 107.558 62.690 1.00 88.80 P
ATOM 26 OP1 U B1042 -73.307 108.564 62.915 1.00109.98 O
ATOM 27 OP2 U B1042 -72.529 106.145 62.967 1.00108.57 O
ATOM 28 O5' U B1042 -71.788 107.739 61.172 1.00 58.53 O
TER
ATOM 2 P C A1043 -70.440 110.130 58.056 1.00 89.66 P
ATOM 3 OP1 C A1043 -70.572 111.343 58.902 1.00116.67 O
ATOM 4 OP2 C A1043 -70.266 110.284 56.584 1.00118.81 O
ATOM 5 O5' C A1043 -69.225 109.289 58.652 1.00 34.45 O
ATOM 6 C5' C A1043 -67.927 109.299 58.021 1.00 32.42 C
ATOM 7 C4' C A1043 -66.844 109.019 59.041 1.00 30.04 C
ATOM 8 O4' C A1043 -67.259 107.967 59.949 1.00 29.74 O
ATOM 9 C3' C A1043 -65.534 108.546 58.438 1.00 28.67 C
ATOM 10 O3' C A1043 -64.724 109.668 58.115 1.00 28.30 O
ATOM 11 C2' C A1043 -64.917 107.700 59.552 1.00 29.67 C
ATOM 12 O2' C A1043 -64.182 108.445 60.500 1.00 30.93 O
ATOM 13 C1' C A1043 -66.153 107.129 60.255 1.00 30.46 C
ATOM 14 N1 C A1043 -66.497 105.737 59.893 1.00 60.29 N
ATOM 15 C2 C A1043 -65.532 104.733 60.023 1.00 62.15 C
ATOM 16 O2 C A1043 -64.399 105.031 60.416 1.00 64.43 O
ATOM 17 N3 C A1043 -65.860 103.460 59.712 1.00 63.79 N
ATOM 18 C4 C A1043 -67.091 103.172 59.284 1.00 62.47 C
ATOM 19 N4 C A1043 -67.381 101.903 58.997 1.00 61.33 N
ATOM 20 C5 C A1043 -68.085 104.172 59.135 1.00 62.63 C
ATOM 21 C6 C A1043 -67.750 105.427 59.446 1.00 61.38 C
ATOM 22 P A A1044 -64.123 109.814 56.641 1.00111.63 P
ATOM 23 OP1 A A1044 -63.225 111.001 56.619 1.00 84.64 O
ATOM 24 OP2 A A1044 -65.276 109.748 55.706 1.00 86.43 O
ATOM 25 O5' A A1044 -63.235 108.502 56.468 1.00 62.20 O
TER
ATOM 1 O3' C B1040 -66.299 106.453 66.886 1.00 7.06 O
ATOM 2 P G B1041 -65.813 107.078 65.484 1.00115.73 P
ATOM 3 OP1 G B1041 -64.649 106.279 65.018 1.00 79.60 O
ATOM 4 OP2 G B1041 -65.657 108.544 65.696 1.00 79.60 O
ATOM 5 O5' G B1041 -67.038 106.840 64.490 1.00 59.09 O
ATOM 6 C5' G B1041 -67.335 107.780 63.425 1.00 59.09 C
ATOM 7 C4' G B1041 -68.691 107.480 62.812 1.00 59.09 C
ATOM 8 O4' G B1041 -68.592 106.302 61.970 1.00 59.09 O
ATOM 9 C3' G B1041 -69.809 107.208 63.806 1.00 59.09 C
ATOM 10 O3' G B1041 -70.959 108.064 63.538 1.00 59.09 O
ATOM 11 C2' G B1041 -69.844 105.674 63.886 1.00 59.09 C
ATOM 12 O2' G B1041 -71.020 105.029 64.314 1.00 59.09 O
ATOM 13 C1' G B1041 -69.361 105.238 62.503 1.00 59.09 C
ATOM 14 N9 G B1041 -68.479 104.072 62.567 1.00 61.59 N
ATOM 15 C8 G B1041 -67.172 104.063 62.995 1.00 61.59 C
ATOM 16 N7 G B1041 -66.609 102.889 62.915 1.00 61.59 N
ATOM 17 C5 G B1041 -67.603 102.067 62.409 1.00 61.59 C
ATOM 18 C6 G B1041 -67.574 100.688 62.102 1.00 61.59 C
ATOM 19 O6 G B1041 -66.638 99.895 62.221 1.00 61.59 O
ATOM 20 N1 G B1041 -68.795 100.250 61.609 1.00 61.59 N
ATOM 21 C2 G B1041 -69.902 101.038 61.438 1.00 61.59 C
ATOM 22 N2 G B1041 -70.984 100.426 60.962 1.00 61.59 N
ATOM 23 N3 G B1041 -69.945 102.331 61.717 1.00 61.59 N
ATOM 24 C4 G B1041 -68.768 102.778 62.196 1.00 61.59 C
ATOM 25 P U B1042 -72.240 107.558 62.690 1.00 88.80 P
ATOM 26 OP1 U B1042 -73.307 108.564 62.915 1.00109.98 O
ATOM 27 OP2 U B1042 -72.529 106.145 62.967 1.00108.57 O
ATOM 28 O5' U B1042 -71.788 107.739 61.172 1.00 58.53 O
TER
Atoms:
C2: (-65.532,104.733,60.023)
OP1: (-70.572,111.343,58.902)
OP2: (-70.266,110.284,56.584)
C4: (-67.091,103.172,59.284)
O5': (-69.225,109.289,58.652)
C3': (-65.534,108.546,58.438)
C1': (-66.153,107.129,60.255)
O4': (-67.259,107.967,59.949)
C5': (-67.927,109.299,58.021)
P: (-70.440,110.130,58.056)
O2: (-64.399,105.031,60.416)
C4': (-66.844,109.019,59.041)
C2': (-64.917,107.700,59.552)
O2': (-64.182,108.445,60.500)
N1: (-66.497,105.737,59.893)
N3: (-65.860,103.460,59.712)
N4: (-67.381,101.903,58.997)
C6: (-67.750,105.427,59.446)
C5: (-68.085,104.172,59.135)
O3': (-64.724,109.668,58.115)
OP1: (-70.572,111.343,58.902)
OP2: (-70.266,110.284,56.584)
C4: (-67.091,103.172,59.284)
O5': (-69.225,109.289,58.652)
C3': (-65.534,108.546,58.438)
C1': (-66.153,107.129,60.255)
O4': (-67.259,107.967,59.949)
C5': (-67.927,109.299,58.021)
P: (-70.440,110.130,58.056)
O2: (-64.399,105.031,60.416)
C4': (-66.844,109.019,59.041)
C2': (-64.917,107.700,59.552)
O2': (-64.182,108.445,60.500)
N1: (-66.497,105.737,59.893)
N3: (-65.860,103.460,59.712)
N4: (-67.381,101.903,58.997)
C6: (-67.750,105.427,59.446)
C5: (-68.085,104.172,59.135)
O3': (-64.724,109.668,58.115)
OP1: (-64.649,106.279,65.018)
OP2: (-65.657,108.544,65.696)
C3': (-69.809,107.208,63.806)
C1': (-69.361,105.238,62.503)
C5': (-67.335,107.780,63.425)
O6: (-66.638,99.895,62.221)
O4': (-68.592,106.302,61.970)
C8: (-67.172,104.063,62.995)
C2: (-69.902,101.038,61.438)
C6: (-67.574,100.688,62.102)
C5: (-67.603,102.067,62.409)
C4: (-68.768,102.778,62.196)
P: (-65.813,107.078,65.484)
C4': (-68.691,107.480,62.812)
C2': (-69.844,105.674,63.886)
O2': (-71.020,105.029,64.314)
N1: (-68.795,100.250,61.609)
N2: (-70.984,100.426,60.962)
N3: (-69.945,102.331,61.717)
N7: (-66.609,102.889,62.915)
N9: (-68.479,104.072,62.567)
O5': (-67.038,106.840,64.490)
O3': (-70.959,108.064,63.538)
OP2: (-65.657,108.544,65.696)
C3': (-69.809,107.208,63.806)
C1': (-69.361,105.238,62.503)
C5': (-67.335,107.780,63.425)
O6: (-66.638,99.895,62.221)
O4': (-68.592,106.302,61.970)
C8: (-67.172,104.063,62.995)
C2: (-69.902,101.038,61.438)
C6: (-67.574,100.688,62.102)
C5: (-67.603,102.067,62.409)
C4: (-68.768,102.778,62.196)
P: (-65.813,107.078,65.484)
C4': (-68.691,107.480,62.812)
C2': (-69.844,105.674,63.886)
O2': (-71.020,105.029,64.314)
N1: (-68.795,100.250,61.609)
N2: (-70.984,100.426,60.962)
N3: (-69.945,102.331,61.717)
N7: (-66.609,102.889,62.915)
N9: (-68.479,104.072,62.567)
O5': (-67.038,106.840,64.490)
O3': (-70.959,108.064,63.538)
Image (generated by PyMOL):