Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:A33:A39
Extra
PDB:
ATOM 1 O3' G A 32 38.434 -12.697 -4.639 1.00 29.00 O
ATOM 2 P C A 33 38.869 -13.551 -5.913 1.00 31.54 P
ATOM 3 OP1 C A 33 40.336 -13.780 -5.780 1.00 31.11 O
ATOM 4 OP2 C A 33 38.324 -12.992 -7.144 1.00 31.44 O
ATOM 5 O5' C A 33 38.159 -14.956 -5.632 1.00 29.51 O
ATOM 6 C5' C A 33 38.322 -15.581 -4.390 1.00 28.92 C
ATOM 7 C4' C A 33 37.298 -16.688 -4.267 1.00 33.16 C
ATOM 8 O4' C A 33 36.008 -16.159 -3.873 1.00 33.84 O
ATOM 9 C3' C A 33 37.014 -17.461 -5.567 1.00 34.74 C
ATOM 10 O3' C A 33 37.987 -18.495 -5.723 1.00 38.73 O
ATOM 11 C2' C A 33 35.658 -18.057 -5.230 1.00 34.72 C
ATOM 12 O2' C A 33 35.786 -19.080 -4.271 1.00 32.30 O
ATOM 13 C1' C A 33 34.970 -16.854 -4.578 1.00 34.84 C
ATOM 14 N1 C A 33 34.301 -16.010 -5.619 1.00 34.91 N
ATOM 15 C2 C A 33 32.992 -16.315 -6.034 1.00 36.29 C
ATOM 16 O2 C A 33 32.398 -17.259 -5.523 1.00 36.37 O
ATOM 17 N3 C A 33 32.403 -15.560 -6.985 1.00 37.63 N
ATOM 18 C4 C A 33 33.067 -14.548 -7.522 1.00 37.69 C
ATOM 19 N4 C A 33 32.442 -13.835 -8.447 1.00 39.61 N
ATOM 20 C5 C A 33 34.393 -14.212 -7.149 1.00 37.33 C
ATOM 21 C6 C A 33 34.963 -14.966 -6.201 1.00 37.02 C
ATOM 22 P U A 34 38.025 -19.497 -7.008 1.00 39.31 P
ATOM 23 OP1 U A 34 39.436 -19.905 -7.046 1.00 39.05 O
ATOM 24 OP2 U A 34 37.284 -18.912 -8.138 1.00 36.43 O
ATOM 25 O5' U A 34 37.166 -20.748 -6.483 1.00 38.89 O
TER
ATOM 1 O3' A B 38 22.528 -22.373 -8.927 1.00 45.25 O
ATOM 2 P A B 39 22.508 -21.244 -7.776 1.00 48.08 P
ATOM 3 OP1 A B 39 21.139 -20.688 -7.697 1.00 49.38 O
ATOM 4 OP2 A B 39 23.653 -20.350 -8.043 1.00 47.14 O
ATOM 5 O5' A B 39 22.678 -22.024 -6.412 1.00 46.98 O
ATOM 6 C5' A B 39 23.176 -21.371 -5.303 1.00 46.74 C
ATOM 7 C4' A B 39 23.918 -22.432 -4.533 1.00 47.19 C
ATOM 8 O4' A B 39 24.944 -23.007 -5.384 1.00 46.54 O
ATOM 9 C3' A B 39 24.658 -21.895 -3.325 1.00 47.19 C
ATOM 10 O3' A B 39 23.810 -21.984 -2.193 1.00 48.06 O
ATOM 11 C2' A B 39 25.879 -22.807 -3.252 1.00 46.96 C
ATOM 12 O2' A B 39 25.641 -24.083 -2.685 1.00 49.70 O
ATOM 13 C1' A B 39 26.191 -22.938 -4.732 1.00 46.09 C
ATOM 14 N9 A B 39 26.906 -21.752 -5.183 1.00 46.31 N
ATOM 15 C8 A B 39 26.466 -20.765 -6.029 1.00 45.66 C
ATOM 16 N7 A B 39 27.344 -19.810 -6.222 1.00 46.40 N
ATOM 17 C5 A B 39 28.418 -20.217 -5.451 1.00 45.22 C
ATOM 18 C6 A B 39 29.662 -19.632 -5.228 1.00 45.05 C
ATOM 19 N6 A B 39 29.983 -18.487 -5.816 1.00 41.96 N
ATOM 20 N1 A B 39 30.521 -20.271 -4.402 1.00 44.66 N
ATOM 21 C2 A B 39 30.165 -21.437 -3.832 1.00 44.02 C
ATOM 22 N3 A B 39 29.002 -22.080 -3.959 1.00 44.77 N
ATOM 23 C4 A B 39 28.176 -21.403 -4.792 1.00 45.71 C
ATOM 24 P C B 40 23.426 -20.637 -1.418 1.00 49.34 P
ATOM 25 OP1 C B 40 22.466 -21.008 -0.358 1.00 50.58 O
ATOM 26 OP2 C B 40 23.117 -19.620 -2.453 1.00 48.28 O
ATOM 27 O5' C B 40 24.797 -20.235 -0.706 1.00 48.02 O
TER
ATOM 2 P C A 33 38.869 -13.551 -5.913 1.00 31.54 P
ATOM 3 OP1 C A 33 40.336 -13.780 -5.780 1.00 31.11 O
ATOM 4 OP2 C A 33 38.324 -12.992 -7.144 1.00 31.44 O
ATOM 5 O5' C A 33 38.159 -14.956 -5.632 1.00 29.51 O
ATOM 6 C5' C A 33 38.322 -15.581 -4.390 1.00 28.92 C
ATOM 7 C4' C A 33 37.298 -16.688 -4.267 1.00 33.16 C
ATOM 8 O4' C A 33 36.008 -16.159 -3.873 1.00 33.84 O
ATOM 9 C3' C A 33 37.014 -17.461 -5.567 1.00 34.74 C
ATOM 10 O3' C A 33 37.987 -18.495 -5.723 1.00 38.73 O
ATOM 11 C2' C A 33 35.658 -18.057 -5.230 1.00 34.72 C
ATOM 12 O2' C A 33 35.786 -19.080 -4.271 1.00 32.30 O
ATOM 13 C1' C A 33 34.970 -16.854 -4.578 1.00 34.84 C
ATOM 14 N1 C A 33 34.301 -16.010 -5.619 1.00 34.91 N
ATOM 15 C2 C A 33 32.992 -16.315 -6.034 1.00 36.29 C
ATOM 16 O2 C A 33 32.398 -17.259 -5.523 1.00 36.37 O
ATOM 17 N3 C A 33 32.403 -15.560 -6.985 1.00 37.63 N
ATOM 18 C4 C A 33 33.067 -14.548 -7.522 1.00 37.69 C
ATOM 19 N4 C A 33 32.442 -13.835 -8.447 1.00 39.61 N
ATOM 20 C5 C A 33 34.393 -14.212 -7.149 1.00 37.33 C
ATOM 21 C6 C A 33 34.963 -14.966 -6.201 1.00 37.02 C
ATOM 22 P U A 34 38.025 -19.497 -7.008 1.00 39.31 P
ATOM 23 OP1 U A 34 39.436 -19.905 -7.046 1.00 39.05 O
ATOM 24 OP2 U A 34 37.284 -18.912 -8.138 1.00 36.43 O
ATOM 25 O5' U A 34 37.166 -20.748 -6.483 1.00 38.89 O
TER
ATOM 1 O3' A B 38 22.528 -22.373 -8.927 1.00 45.25 O
ATOM 2 P A B 39 22.508 -21.244 -7.776 1.00 48.08 P
ATOM 3 OP1 A B 39 21.139 -20.688 -7.697 1.00 49.38 O
ATOM 4 OP2 A B 39 23.653 -20.350 -8.043 1.00 47.14 O
ATOM 5 O5' A B 39 22.678 -22.024 -6.412 1.00 46.98 O
ATOM 6 C5' A B 39 23.176 -21.371 -5.303 1.00 46.74 C
ATOM 7 C4' A B 39 23.918 -22.432 -4.533 1.00 47.19 C
ATOM 8 O4' A B 39 24.944 -23.007 -5.384 1.00 46.54 O
ATOM 9 C3' A B 39 24.658 -21.895 -3.325 1.00 47.19 C
ATOM 10 O3' A B 39 23.810 -21.984 -2.193 1.00 48.06 O
ATOM 11 C2' A B 39 25.879 -22.807 -3.252 1.00 46.96 C
ATOM 12 O2' A B 39 25.641 -24.083 -2.685 1.00 49.70 O
ATOM 13 C1' A B 39 26.191 -22.938 -4.732 1.00 46.09 C
ATOM 14 N9 A B 39 26.906 -21.752 -5.183 1.00 46.31 N
ATOM 15 C8 A B 39 26.466 -20.765 -6.029 1.00 45.66 C
ATOM 16 N7 A B 39 27.344 -19.810 -6.222 1.00 46.40 N
ATOM 17 C5 A B 39 28.418 -20.217 -5.451 1.00 45.22 C
ATOM 18 C6 A B 39 29.662 -19.632 -5.228 1.00 45.05 C
ATOM 19 N6 A B 39 29.983 -18.487 -5.816 1.00 41.96 N
ATOM 20 N1 A B 39 30.521 -20.271 -4.402 1.00 44.66 N
ATOM 21 C2 A B 39 30.165 -21.437 -3.832 1.00 44.02 C
ATOM 22 N3 A B 39 29.002 -22.080 -3.959 1.00 44.77 N
ATOM 23 C4 A B 39 28.176 -21.403 -4.792 1.00 45.71 C
ATOM 24 P C B 40 23.426 -20.637 -1.418 1.00 49.34 P
ATOM 25 OP1 C B 40 22.466 -21.008 -0.358 1.00 50.58 O
ATOM 26 OP2 C B 40 23.117 -19.620 -2.453 1.00 48.28 O
ATOM 27 O5' C B 40 24.797 -20.235 -0.706 1.00 48.02 O
TER
Atoms:
C2: (32.992,-16.315,-6.034)
OP1: (40.336,-13.780,-5.780)
OP2: (38.324,-12.992,-7.144)
C4: (33.067,-14.548,-7.522)
O5': (38.159,-14.956,-5.632)
C3': (37.014,-17.461,-5.567)
C1': (34.970,-16.854,-4.578)
O4': (36.008,-16.159,-3.873)
C5': (38.322,-15.581,-4.390)
P: (38.869,-13.551,-5.913)
O2: (32.398,-17.259,-5.523)
C4': (37.298,-16.688,-4.267)
C2': (35.658,-18.057,-5.230)
O2': (35.786,-19.080,-4.271)
N1: (34.301,-16.010,-5.619)
N3: (32.403,-15.560,-6.985)
N4: (32.442,-13.835,-8.447)
C6: (34.963,-14.966,-6.201)
C5: (34.393,-14.212,-7.149)
O3': (37.987,-18.495,-5.723)
OP1: (40.336,-13.780,-5.780)
OP2: (38.324,-12.992,-7.144)
C4: (33.067,-14.548,-7.522)
O5': (38.159,-14.956,-5.632)
C3': (37.014,-17.461,-5.567)
C1': (34.970,-16.854,-4.578)
O4': (36.008,-16.159,-3.873)
C5': (38.322,-15.581,-4.390)
P: (38.869,-13.551,-5.913)
O2: (32.398,-17.259,-5.523)
C4': (37.298,-16.688,-4.267)
C2': (35.658,-18.057,-5.230)
O2': (35.786,-19.080,-4.271)
N1: (34.301,-16.010,-5.619)
N3: (32.403,-15.560,-6.985)
N4: (32.442,-13.835,-8.447)
C6: (34.963,-14.966,-6.201)
C5: (34.393,-14.212,-7.149)
O3': (37.987,-18.495,-5.723)
OP1: (21.139,-20.688,-7.697)
OP2: (23.653,-20.350,-8.043)
C3': (24.658,-21.895,-3.325)
C1': (26.191,-22.938,-4.732)
C5': (23.176,-21.371,-5.303)
O4': (24.944,-23.007,-5.384)
C8: (26.466,-20.765,-6.029)
O2': (25.641,-24.083,-2.685)
C6: (29.662,-19.632,-5.228)
C5: (28.418,-20.217,-5.451)
C4: (28.176,-21.403,-4.792)
P: (22.508,-21.244,-7.776)
C4': (23.918,-22.432,-4.533)
C2': (25.879,-22.807,-3.252)
C2: (30.165,-21.437,-3.832)
N1: (30.521,-20.271,-4.402)
N3: (29.002,-22.080,-3.959)
N6: (29.983,-18.487,-5.816)
N7: (27.344,-19.810,-6.222)
N9: (26.906,-21.752,-5.183)
O5': (22.678,-22.024,-6.412)
O3': (23.810,-21.984,-2.193)
OP2: (23.653,-20.350,-8.043)
C3': (24.658,-21.895,-3.325)
C1': (26.191,-22.938,-4.732)
C5': (23.176,-21.371,-5.303)
O4': (24.944,-23.007,-5.384)
C8: (26.466,-20.765,-6.029)
O2': (25.641,-24.083,-2.685)
C6: (29.662,-19.632,-5.228)
C5: (28.418,-20.217,-5.451)
C4: (28.176,-21.403,-4.792)
P: (22.508,-21.244,-7.776)
C4': (23.918,-22.432,-4.533)
C2': (25.879,-22.807,-3.252)
C2: (30.165,-21.437,-3.832)
N1: (30.521,-20.271,-4.402)
N3: (29.002,-22.080,-3.959)
N6: (29.983,-18.487,-5.816)
N7: (27.344,-19.810,-6.222)
N9: (26.906,-21.752,-5.183)
O5': (22.678,-22.024,-6.412)
O3': (23.810,-21.984,-2.193)
Image (generated by PyMOL):