Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2L:A7:B5
Extra
PDB:
ATOM 1 O3' U A 6 37.114 5.411 52.912 1.00 62.23 O
ATOM 2 P C A 7 36.765 5.105 54.443 1.00 65.14 P
ATOM 3 OP1 C A 7 36.923 3.648 54.660 1.00 68.69 O
ATOM 4 OP2 C A 7 35.465 5.755 54.720 1.00 65.67 O
ATOM 5 O5' C A 7 37.895 5.869 55.263 1.00 65.87 O
ATOM 6 C5' C A 7 39.271 5.581 55.040 1.00 69.38 C
ATOM 7 C4' C A 7 40.131 6.596 55.742 1.00 72.00 C
ATOM 8 O4' C A 7 39.959 7.894 55.120 1.00 73.80 O
ATOM 9 C3' C A 7 39.748 6.836 57.187 1.00 72.86 C
ATOM 10 O3' C A 7 40.318 5.854 58.021 1.00 76.94 O
ATOM 11 C2' C A 7 40.298 8.229 57.448 1.00 72.84 C
ATOM 12 O2' C A 7 41.683 8.268 57.712 1.00 69.75 O
ATOM 13 C1' C A 7 40.012 8.908 56.113 1.00 72.66 C
ATOM 14 N1 C A 7 38.711 9.581 56.155 1.00 73.64 N
ATOM 15 C2 C A 7 38.606 10.771 56.874 1.00 73.62 C
ATOM 16 O2 C A 7 39.616 11.217 57.438 1.00 74.73 O
ATOM 17 N3 C A 7 37.415 11.404 56.937 1.00 73.58 N
ATOM 18 C4 C A 7 36.356 10.893 56.307 1.00 73.51 C
ATOM 19 N4 C A 7 35.199 11.556 56.389 1.00 74.42 N
ATOM 20 C5 C A 7 36.438 9.678 55.562 1.00 72.84 C
ATOM 21 C6 C A 7 37.623 9.061 55.514 1.00 72.40 C
ATOM 22 P C A 8 39.534 5.398 59.336 1.00 80.06 P
ATOM 23 OP1 C A 8 40.350 4.341 59.973 1.00 82.24 O
ATOM 24 OP2 C A 8 38.132 5.113 58.946 1.00 75.85 O
ATOM 25 O5' C A 8 39.581 6.694 60.257 1.00 79.85 O
TER
ATOM 1 O3' G B 4 31.321 19.913 64.290 1.00 75.34 O
ATOM 2 P A B 5 32.045 20.688 63.085 1.00 73.95 P
ATOM 3 OP1 A B 5 32.337 22.073 63.545 1.00 72.79 O
ATOM 4 OP2 A B 5 31.224 20.474 61.855 1.00 66.73 O
ATOM 5 O5' A B 5 33.437 19.928 62.941 1.00 64.67 O
ATOM 6 C5' A B 5 34.420 20.028 63.964 1.00 65.26 C
ATOM 7 C4' A B 5 35.597 19.147 63.638 1.00 65.51 C
ATOM 8 O4' A B 5 35.143 17.772 63.560 1.00 65.49 O
ATOM 9 C3' A B 5 36.245 19.403 62.289 1.00 63.08 C
ATOM 10 O3' A B 5 37.214 20.431 62.373 1.00 62.48 O
ATOM 11 C2' A B 5 36.901 18.065 61.992 1.00 63.21 C
ATOM 12 O2' A B 5 38.130 17.909 62.670 1.00 60.78 O
ATOM 13 C1' A B 5 35.851 17.095 62.535 1.00 63.57 C
ATOM 14 N9 A B 5 34.890 16.722 61.499 1.00 63.65 N
ATOM 15 C8 A B 5 33.648 17.262 61.260 1.00 62.33 C
ATOM 16 N7 A B 5 33.026 16.725 60.238 1.00 62.19 N
ATOM 17 C5 A B 5 33.916 15.764 59.775 1.00 62.62 C
ATOM 18 C6 A B 5 33.851 14.848 58.710 1.00 62.48 C
ATOM 19 N6 A B 5 32.808 14.746 57.888 1.00 62.44 N
ATOM 20 N1 A B 5 34.908 14.028 58.521 1.00 63.02 N
ATOM 21 C2 A B 5 35.957 14.129 59.352 1.00 62.07 C
ATOM 22 N3 A B 5 36.136 14.948 60.387 1.00 61.93 N
ATOM 23 C4 A B 5 35.067 15.749 60.546 1.00 63.16 C
ATOM 24 P G B 6 37.490 21.359 61.097 1.00 62.06 P
ATOM 25 OP1 G B 6 38.617 22.279 61.404 1.00 61.64 O
ATOM 26 OP2 G B 6 36.178 21.912 60.668 1.00 62.60 O
ATOM 27 O5' G B 6 37.986 20.336 59.989 1.00 62.16 O
TER
ATOM 2 P C A 7 36.765 5.105 54.443 1.00 65.14 P
ATOM 3 OP1 C A 7 36.923 3.648 54.660 1.00 68.69 O
ATOM 4 OP2 C A 7 35.465 5.755 54.720 1.00 65.67 O
ATOM 5 O5' C A 7 37.895 5.869 55.263 1.00 65.87 O
ATOM 6 C5' C A 7 39.271 5.581 55.040 1.00 69.38 C
ATOM 7 C4' C A 7 40.131 6.596 55.742 1.00 72.00 C
ATOM 8 O4' C A 7 39.959 7.894 55.120 1.00 73.80 O
ATOM 9 C3' C A 7 39.748 6.836 57.187 1.00 72.86 C
ATOM 10 O3' C A 7 40.318 5.854 58.021 1.00 76.94 O
ATOM 11 C2' C A 7 40.298 8.229 57.448 1.00 72.84 C
ATOM 12 O2' C A 7 41.683 8.268 57.712 1.00 69.75 O
ATOM 13 C1' C A 7 40.012 8.908 56.113 1.00 72.66 C
ATOM 14 N1 C A 7 38.711 9.581 56.155 1.00 73.64 N
ATOM 15 C2 C A 7 38.606 10.771 56.874 1.00 73.62 C
ATOM 16 O2 C A 7 39.616 11.217 57.438 1.00 74.73 O
ATOM 17 N3 C A 7 37.415 11.404 56.937 1.00 73.58 N
ATOM 18 C4 C A 7 36.356 10.893 56.307 1.00 73.51 C
ATOM 19 N4 C A 7 35.199 11.556 56.389 1.00 74.42 N
ATOM 20 C5 C A 7 36.438 9.678 55.562 1.00 72.84 C
ATOM 21 C6 C A 7 37.623 9.061 55.514 1.00 72.40 C
ATOM 22 P C A 8 39.534 5.398 59.336 1.00 80.06 P
ATOM 23 OP1 C A 8 40.350 4.341 59.973 1.00 82.24 O
ATOM 24 OP2 C A 8 38.132 5.113 58.946 1.00 75.85 O
ATOM 25 O5' C A 8 39.581 6.694 60.257 1.00 79.85 O
TER
ATOM 1 O3' G B 4 31.321 19.913 64.290 1.00 75.34 O
ATOM 2 P A B 5 32.045 20.688 63.085 1.00 73.95 P
ATOM 3 OP1 A B 5 32.337 22.073 63.545 1.00 72.79 O
ATOM 4 OP2 A B 5 31.224 20.474 61.855 1.00 66.73 O
ATOM 5 O5' A B 5 33.437 19.928 62.941 1.00 64.67 O
ATOM 6 C5' A B 5 34.420 20.028 63.964 1.00 65.26 C
ATOM 7 C4' A B 5 35.597 19.147 63.638 1.00 65.51 C
ATOM 8 O4' A B 5 35.143 17.772 63.560 1.00 65.49 O
ATOM 9 C3' A B 5 36.245 19.403 62.289 1.00 63.08 C
ATOM 10 O3' A B 5 37.214 20.431 62.373 1.00 62.48 O
ATOM 11 C2' A B 5 36.901 18.065 61.992 1.00 63.21 C
ATOM 12 O2' A B 5 38.130 17.909 62.670 1.00 60.78 O
ATOM 13 C1' A B 5 35.851 17.095 62.535 1.00 63.57 C
ATOM 14 N9 A B 5 34.890 16.722 61.499 1.00 63.65 N
ATOM 15 C8 A B 5 33.648 17.262 61.260 1.00 62.33 C
ATOM 16 N7 A B 5 33.026 16.725 60.238 1.00 62.19 N
ATOM 17 C5 A B 5 33.916 15.764 59.775 1.00 62.62 C
ATOM 18 C6 A B 5 33.851 14.848 58.710 1.00 62.48 C
ATOM 19 N6 A B 5 32.808 14.746 57.888 1.00 62.44 N
ATOM 20 N1 A B 5 34.908 14.028 58.521 1.00 63.02 N
ATOM 21 C2 A B 5 35.957 14.129 59.352 1.00 62.07 C
ATOM 22 N3 A B 5 36.136 14.948 60.387 1.00 61.93 N
ATOM 23 C4 A B 5 35.067 15.749 60.546 1.00 63.16 C
ATOM 24 P G B 6 37.490 21.359 61.097 1.00 62.06 P
ATOM 25 OP1 G B 6 38.617 22.279 61.404 1.00 61.64 O
ATOM 26 OP2 G B 6 36.178 21.912 60.668 1.00 62.60 O
ATOM 27 O5' G B 6 37.986 20.336 59.989 1.00 62.16 O
TER
Atoms:
C2: (38.606,10.771,56.874)
OP1: (36.923,3.648,54.660)
OP2: (35.465,5.755,54.720)
C4: (36.356,10.893,56.307)
O5': (37.895,5.869,55.263)
C3': (39.748,6.836,57.187)
C1': (40.012,8.908,56.113)
O4': (39.959,7.894,55.120)
C5': (39.271,5.581,55.040)
P: (36.765,5.105,54.443)
O2: (39.616,11.217,57.438)
C4': (40.131,6.596,55.742)
C2': (40.298,8.229,57.448)
O2': (41.683,8.268,57.712)
N1: (38.711,9.581,56.155)
N3: (37.415,11.404,56.937)
N4: (35.199,11.556,56.389)
C6: (37.623,9.061,55.514)
C5: (36.438,9.678,55.562)
O3': (40.318,5.854,58.021)
OP1: (36.923,3.648,54.660)
OP2: (35.465,5.755,54.720)
C4: (36.356,10.893,56.307)
O5': (37.895,5.869,55.263)
C3': (39.748,6.836,57.187)
C1': (40.012,8.908,56.113)
O4': (39.959,7.894,55.120)
C5': (39.271,5.581,55.040)
P: (36.765,5.105,54.443)
O2: (39.616,11.217,57.438)
C4': (40.131,6.596,55.742)
C2': (40.298,8.229,57.448)
O2': (41.683,8.268,57.712)
N1: (38.711,9.581,56.155)
N3: (37.415,11.404,56.937)
N4: (35.199,11.556,56.389)
C6: (37.623,9.061,55.514)
C5: (36.438,9.678,55.562)
O3': (40.318,5.854,58.021)
OP1: (32.337,22.073,63.545)
OP2: (31.224,20.474,61.855)
C3': (36.245,19.403,62.289)
C1': (35.851,17.095,62.535)
C5': (34.420,20.028,63.964)
O4': (35.143,17.772,63.560)
C8: (33.648,17.262,61.260)
O2': (38.130,17.909,62.670)
C6: (33.851,14.848,58.710)
C5: (33.916,15.764,59.775)
C4: (35.067,15.749,60.546)
P: (32.045,20.688,63.085)
C4': (35.597,19.147,63.638)
C2': (36.901,18.065,61.992)
C2: (35.957,14.129,59.352)
N1: (34.908,14.028,58.521)
N3: (36.136,14.948,60.387)
N6: (32.808,14.746,57.888)
N7: (33.026,16.725,60.238)
N9: (34.890,16.722,61.499)
O5': (33.437,19.928,62.941)
O3': (37.214,20.431,62.373)
OP2: (31.224,20.474,61.855)
C3': (36.245,19.403,62.289)
C1': (35.851,17.095,62.535)
C5': (34.420,20.028,63.964)
O4': (35.143,17.772,63.560)
C8: (33.648,17.262,61.260)
O2': (38.130,17.909,62.670)
C6: (33.851,14.848,58.710)
C5: (33.916,15.764,59.775)
C4: (35.067,15.749,60.546)
P: (32.045,20.688,63.085)
C4': (35.597,19.147,63.638)
C2': (36.901,18.065,61.992)
C2: (35.957,14.129,59.352)
N1: (34.908,14.028,58.521)
N3: (36.136,14.948,60.387)
N6: (32.808,14.746,57.888)
N7: (33.026,16.725,60.238)
N9: (34.890,16.722,61.499)
O5': (33.437,19.928,62.941)
O3': (37.214,20.431,62.373)
Image (generated by PyMOL):