Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3P59:F7:E11
Extra
PDB:
ATOM 1 O3' G A 6 35.510 -29.827 7.515 1.00 39.57 O
ATOM 2 P C A 7 36.972 -30.400 7.117 1.00 33.99 P
ATOM 3 OP1 C A 7 36.770 -31.722 6.515 1.00 29.50 O
ATOM 4 OP2 C A 7 37.831 -30.295 8.312 1.00 37.05 O
ATOM 5 O5' C A 7 37.478 -29.374 6.005 1.00 55.14 O
ATOM 6 C5' C A 7 36.821 -29.277 4.744 1.00 48.51 C
ATOM 7 C4' C A 7 37.457 -28.230 3.847 1.00 38.72 C
ATOM 8 O4' C A 7 37.270 -26.887 4.401 1.00 33.20 O
ATOM 9 C3' C A 7 38.948 -28.329 3.672 1.00 40.52 C
ATOM 10 O3' C A 7 39.342 -29.362 2.790 1.00 46.32 O
ATOM 11 C2' C A 7 39.315 -26.918 3.206 1.00 33.75 C
ATOM 12 O2' C A 7 38.963 -26.722 1.847 1.00 33.14 O
ATOM 13 C1' C A 7 38.383 -26.075 4.073 1.00 26.28 C
ATOM 14 N1 C A 7 39.039 -25.680 5.326 1.00 30.88 N
ATOM 15 C2 C A 7 39.771 -24.492 5.473 1.00 21.53 C
ATOM 16 O2 C A 7 39.893 -23.649 4.547 1.00 20.45 O
ATOM 17 N3 C A 7 40.335 -24.284 6.680 1.00 26.64 N
ATOM 18 C4 C A 7 40.216 -25.180 7.675 1.00 25.14 C
ATOM 19 N4 C A 7 40.806 -24.931 8.842 1.00 19.78 N
ATOM 20 C5 C A 7 39.487 -26.384 7.531 1.00 22.12 C
ATOM 21 C6 C A 7 38.922 -26.587 6.350 1.00 29.34 C
ATOM 22 P C A 8 40.720 -30.146 3.052 1.00 45.07 P
ATOM 23 OP1 C A 8 41.536 -29.281 3.919 1.00 39.79 O
ATOM 24 OP2 C A 8 41.271 -30.536 1.722 1.00 52.08 O
ATOM 25 O5' C A 8 40.247 -31.462 3.840 1.00 50.43 O
TER
ATOM 1 O3' U B 10 45.729 -14.312 7.842 1.00 34.51 O
ATOM 2 P A B 11 44.176 -14.105 7.515 1.00 26.77 P
ATOM 3 OP1 A B 11 43.934 -12.646 7.468 1.00 32.97 O
ATOM 4 OP2 A B 11 43.405 -14.926 8.482 1.00 36.47 O
ATOM 5 O5' A B 11 44.030 -14.723 6.063 1.00 39.06 O
ATOM 6 C5' A B 11 44.476 -14.020 4.914 1.00 37.38 C
ATOM 7 C4' A B 11 44.010 -14.701 3.657 1.00 29.51 C
ATOM 8 O4' A B 11 44.516 -16.064 3.624 1.00 35.38 O
ATOM 9 C3' A B 11 42.515 -14.880 3.534 1.00 25.85 C
ATOM 10 O3' A B 11 41.855 -13.720 3.085 1.00 30.53 O
ATOM 11 C2' A B 11 42.402 -16.077 2.594 1.00 29.77 C
ATOM 12 O2' A B 11 42.741 -15.719 1.262 1.00 34.31 O
ATOM 13 C1' A B 11 43.515 -16.940 3.136 1.00 29.71 C
ATOM 14 N9 A B 11 43.058 -17.790 4.257 1.00 29.90 N
ATOM 15 C8 A B 11 43.084 -17.466 5.607 1.00 28.16 C
ATOM 16 N7 A B 11 42.637 -18.417 6.392 1.00 20.96 N
ATOM 17 C5 A B 11 42.292 -19.458 5.488 1.00 22.84 C
ATOM 18 C6 A B 11 41.734 -20.758 5.658 1.00 19.30 C
ATOM 19 N6 A B 11 41.435 -21.300 6.845 1.00 22.58 N
ATOM 20 N1 A B 11 41.518 -21.513 4.558 1.00 24.51 N
ATOM 21 C2 A B 11 41.819 -21.006 3.355 1.00 16.92 C
ATOM 22 N3 A B 11 42.332 -19.817 3.064 1.00 19.23 N
ATOM 23 C4 A B 11 42.546 -19.080 4.174 1.00 15.32 C
ATOM 24 P C B 12 40.321 -13.499 3.442 1.00 42.91 P
ATOM 25 OP1 C B 12 39.854 -12.338 2.656 1.00 45.49 O
ATOM 26 OP2 C B 12 40.230 -13.450 4.925 1.00 34.18 O
ATOM 27 O5' C B 12 39.641 -14.842 2.905 1.00 33.93 O
TER
ATOM 2 P C A 7 36.972 -30.400 7.117 1.00 33.99 P
ATOM 3 OP1 C A 7 36.770 -31.722 6.515 1.00 29.50 O
ATOM 4 OP2 C A 7 37.831 -30.295 8.312 1.00 37.05 O
ATOM 5 O5' C A 7 37.478 -29.374 6.005 1.00 55.14 O
ATOM 6 C5' C A 7 36.821 -29.277 4.744 1.00 48.51 C
ATOM 7 C4' C A 7 37.457 -28.230 3.847 1.00 38.72 C
ATOM 8 O4' C A 7 37.270 -26.887 4.401 1.00 33.20 O
ATOM 9 C3' C A 7 38.948 -28.329 3.672 1.00 40.52 C
ATOM 10 O3' C A 7 39.342 -29.362 2.790 1.00 46.32 O
ATOM 11 C2' C A 7 39.315 -26.918 3.206 1.00 33.75 C
ATOM 12 O2' C A 7 38.963 -26.722 1.847 1.00 33.14 O
ATOM 13 C1' C A 7 38.383 -26.075 4.073 1.00 26.28 C
ATOM 14 N1 C A 7 39.039 -25.680 5.326 1.00 30.88 N
ATOM 15 C2 C A 7 39.771 -24.492 5.473 1.00 21.53 C
ATOM 16 O2 C A 7 39.893 -23.649 4.547 1.00 20.45 O
ATOM 17 N3 C A 7 40.335 -24.284 6.680 1.00 26.64 N
ATOM 18 C4 C A 7 40.216 -25.180 7.675 1.00 25.14 C
ATOM 19 N4 C A 7 40.806 -24.931 8.842 1.00 19.78 N
ATOM 20 C5 C A 7 39.487 -26.384 7.531 1.00 22.12 C
ATOM 21 C6 C A 7 38.922 -26.587 6.350 1.00 29.34 C
ATOM 22 P C A 8 40.720 -30.146 3.052 1.00 45.07 P
ATOM 23 OP1 C A 8 41.536 -29.281 3.919 1.00 39.79 O
ATOM 24 OP2 C A 8 41.271 -30.536 1.722 1.00 52.08 O
ATOM 25 O5' C A 8 40.247 -31.462 3.840 1.00 50.43 O
TER
ATOM 1 O3' U B 10 45.729 -14.312 7.842 1.00 34.51 O
ATOM 2 P A B 11 44.176 -14.105 7.515 1.00 26.77 P
ATOM 3 OP1 A B 11 43.934 -12.646 7.468 1.00 32.97 O
ATOM 4 OP2 A B 11 43.405 -14.926 8.482 1.00 36.47 O
ATOM 5 O5' A B 11 44.030 -14.723 6.063 1.00 39.06 O
ATOM 6 C5' A B 11 44.476 -14.020 4.914 1.00 37.38 C
ATOM 7 C4' A B 11 44.010 -14.701 3.657 1.00 29.51 C
ATOM 8 O4' A B 11 44.516 -16.064 3.624 1.00 35.38 O
ATOM 9 C3' A B 11 42.515 -14.880 3.534 1.00 25.85 C
ATOM 10 O3' A B 11 41.855 -13.720 3.085 1.00 30.53 O
ATOM 11 C2' A B 11 42.402 -16.077 2.594 1.00 29.77 C
ATOM 12 O2' A B 11 42.741 -15.719 1.262 1.00 34.31 O
ATOM 13 C1' A B 11 43.515 -16.940 3.136 1.00 29.71 C
ATOM 14 N9 A B 11 43.058 -17.790 4.257 1.00 29.90 N
ATOM 15 C8 A B 11 43.084 -17.466 5.607 1.00 28.16 C
ATOM 16 N7 A B 11 42.637 -18.417 6.392 1.00 20.96 N
ATOM 17 C5 A B 11 42.292 -19.458 5.488 1.00 22.84 C
ATOM 18 C6 A B 11 41.734 -20.758 5.658 1.00 19.30 C
ATOM 19 N6 A B 11 41.435 -21.300 6.845 1.00 22.58 N
ATOM 20 N1 A B 11 41.518 -21.513 4.558 1.00 24.51 N
ATOM 21 C2 A B 11 41.819 -21.006 3.355 1.00 16.92 C
ATOM 22 N3 A B 11 42.332 -19.817 3.064 1.00 19.23 N
ATOM 23 C4 A B 11 42.546 -19.080 4.174 1.00 15.32 C
ATOM 24 P C B 12 40.321 -13.499 3.442 1.00 42.91 P
ATOM 25 OP1 C B 12 39.854 -12.338 2.656 1.00 45.49 O
ATOM 26 OP2 C B 12 40.230 -13.450 4.925 1.00 34.18 O
ATOM 27 O5' C B 12 39.641 -14.842 2.905 1.00 33.93 O
TER
Atoms:
C2: (39.771,-24.492,5.473)
OP1: (36.770,-31.722,6.515)
OP2: (37.831,-30.295,8.312)
C4: (40.216,-25.180,7.675)
O5': (37.478,-29.374,6.005)
C3': (38.948,-28.329,3.672)
C1': (38.383,-26.075,4.073)
O4': (37.270,-26.887,4.401)
C5': (36.821,-29.277,4.744)
P: (36.972,-30.400,7.117)
O2: (39.893,-23.649,4.547)
C4': (37.457,-28.230,3.847)
C2': (39.315,-26.918,3.206)
O2': (38.963,-26.722,1.847)
N1: (39.039,-25.680,5.326)
N3: (40.335,-24.284,6.680)
N4: (40.806,-24.931,8.842)
C6: (38.922,-26.587,6.350)
C5: (39.487,-26.384,7.531)
O3': (39.342,-29.362,2.790)
OP1: (36.770,-31.722,6.515)
OP2: (37.831,-30.295,8.312)
C4: (40.216,-25.180,7.675)
O5': (37.478,-29.374,6.005)
C3': (38.948,-28.329,3.672)
C1': (38.383,-26.075,4.073)
O4': (37.270,-26.887,4.401)
C5': (36.821,-29.277,4.744)
P: (36.972,-30.400,7.117)
O2: (39.893,-23.649,4.547)
C4': (37.457,-28.230,3.847)
C2': (39.315,-26.918,3.206)
O2': (38.963,-26.722,1.847)
N1: (39.039,-25.680,5.326)
N3: (40.335,-24.284,6.680)
N4: (40.806,-24.931,8.842)
C6: (38.922,-26.587,6.350)
C5: (39.487,-26.384,7.531)
O3': (39.342,-29.362,2.790)
OP1: (43.934,-12.646,7.468)
OP2: (43.405,-14.926,8.482)
C3': (42.515,-14.880,3.534)
C1': (43.515,-16.940,3.136)
C5': (44.476,-14.020,4.914)
O4': (44.516,-16.064,3.624)
C8: (43.084,-17.466,5.607)
O2': (42.741,-15.719,1.262)
C6: (41.734,-20.758,5.658)
C5: (42.292,-19.458,5.488)
C4: (42.546,-19.080,4.174)
P: (44.176,-14.105,7.515)
C4': (44.010,-14.701,3.657)
C2': (42.402,-16.077,2.594)
C2: (41.819,-21.006,3.355)
N1: (41.518,-21.513,4.558)
N3: (42.332,-19.817,3.064)
N6: (41.435,-21.300,6.845)
N7: (42.637,-18.417,6.392)
N9: (43.058,-17.790,4.257)
O5': (44.030,-14.723,6.063)
O3': (41.855,-13.720,3.085)
OP2: (43.405,-14.926,8.482)
C3': (42.515,-14.880,3.534)
C1': (43.515,-16.940,3.136)
C5': (44.476,-14.020,4.914)
O4': (44.516,-16.064,3.624)
C8: (43.084,-17.466,5.607)
O2': (42.741,-15.719,1.262)
C6: (41.734,-20.758,5.658)
C5: (42.292,-19.458,5.488)
C4: (42.546,-19.080,4.174)
P: (44.176,-14.105,7.515)
C4': (44.010,-14.701,3.657)
C2': (42.402,-16.077,2.594)
C2: (41.819,-21.006,3.355)
N1: (41.518,-21.513,4.558)
N3: (42.332,-19.817,3.064)
N6: (41.435,-21.300,6.845)
N7: (42.637,-18.417,6.392)
N9: (43.058,-17.790,4.257)
O5': (44.030,-14.723,6.063)
O3': (41.855,-13.720,3.085)
Image (generated by PyMOL):