ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02064:02062

Extra

PDB:
ATOM 1 O3' U A2063 94.446 102.058 74.763 1.00 38.53 O
ATOM 2 P A A2064 93.261 103.099 75.018 1.00 34.23 P
ATOM 3 OP1 A A2064 93.284 104.056 73.890 1.00 37.59 O
ATOM 4 OP2 A A2064 93.352 103.598 76.415 1.00 33.92 O
ATOM 5 O5' A A2064 91.945 102.222 74.897 1.00 35.16 O
ATOM 6 C5' A A2064 91.774 101.013 75.663 1.00 29.78 C
ATOM 7 C4' A A2064 90.423 100.431 75.366 1.00 28.77 C
ATOM 8 O4' A A2064 89.415 101.380 75.807 1.00 31.30 O
ATOM 9 C3' A A2064 90.162 100.264 73.877 1.00 28.64 C
ATOM 10 O3' A A2064 90.671 99.032 73.394 1.00 26.15 O
ATOM 11 C2' A A2064 88.650 100.388 73.782 1.00 29.41 C
ATOM 12 O2' A A2064 87.995 99.197 74.151 1.00 30.70 O
ATOM 13 C1' A A2064 88.371 101.455 74.847 1.00 31.64 C
ATOM 14 N9 A A2064 88.280 102.842 74.363 1.00 31.78 N
ATOM 15 C8 A A2064 89.122 103.888 74.641 1.00 29.81 C
ATOM 16 N7 A A2064 88.754 105.022 74.101 1.00 30.28 N
ATOM 17 C5 A A2064 87.599 104.704 73.404 1.00 30.96 C
ATOM 18 C6 A A2064 86.718 105.475 72.612 1.00 31.06 C
ATOM 19 N6 A A2064 86.868 106.779 72.375 1.00 27.61 N
ATOM 20 N1 A A2064 85.658 104.846 72.065 1.00 31.39 N
ATOM 21 C2 A A2064 85.498 103.540 72.297 1.00 30.44 C
ATOM 22 N3 A A2064 86.249 102.713 73.015 1.00 31.70 N
ATOM 23 C4 A A2064 87.297 103.363 73.550 1.00 31.68 C
ATOM 24 P C A2065 91.038 98.881 71.840 1.00 28.83 P
ATOM 25 OP1 C A2065 91.583 97.524 71.620 1.00 32.87 O
ATOM 26 OP2 C A2065 91.823 100.054 71.404 1.00 30.03 O
ATOM 27 O5' C A2065 89.624 98.949 71.124 1.00 29.81 O
TER

ATOM 1 O3' U B2061 94.091 112.681 77.241 1.00 30.92 O
ATOM 2 P U B2062 95.075 112.194 76.071 1.00 32.80 P
ATOM 3 OP1 U B2062 96.428 112.735 76.399 1.00 33.15 O
ATOM 4 OP2 U B2062 94.462 112.497 74.750 1.00 32.34 O
ATOM 5 O5' U B2062 95.128 110.617 76.237 1.00 31.92 O
ATOM 6 C5' U B2062 95.639 110.021 77.435 1.00 30.70 C
ATOM 7 C4' U B2062 95.152 108.603 77.548 1.00 31.72 C
ATOM 8 O4' U B2062 93.702 108.611 77.655 1.00 32.80 O
ATOM 9 C3' U B2062 95.419 107.715 76.343 1.00 31.82 C
ATOM 10 O3' U B2062 96.752 107.219 76.348 1.00 33.78 O
ATOM 11 C2' U B2062 94.367 106.626 76.524 1.00 31.68 C
ATOM 12 O2' U B2062 94.719 105.690 77.520 1.00 28.70 O
ATOM 13 C1' U B2062 93.179 107.445 77.039 1.00 32.07 C
ATOM 14 N1 U B2062 92.214 107.834 75.995 1.00 31.97 N
ATOM 15 C2 U B2062 91.178 106.951 75.740 1.00 31.16 C
ATOM 16 O2 U B2062 91.043 105.906 76.343 1.00 33.52 O
ATOM 17 N3 U B2062 90.302 107.341 74.757 1.00 30.08 N
ATOM 18 C4 U B2062 90.340 108.504 74.019 1.00 31.27 C
ATOM 19 O4 U B2062 89.430 108.737 73.215 1.00 28.13 O
ATOM 20 C5 U B2062 91.443 109.375 74.331 1.00 30.78 C
ATOM 21 C6 U B2062 92.321 109.018 75.287 1.00 31.61 C
ATOM 22 P U B2063 97.348 106.504 75.037 1.00 35.80 P
ATOM 23 OP1 U B2063 98.798 106.321 75.264 1.00 38.93 O
ATOM 24 OP2 U B2063 96.889 107.229 73.830 1.00 36.84 O
ATOM 25 O5' U B2063 96.692 105.050 75.063 1.00 37.77 O
TER

Atoms:
OP1: (93.284,104.056,73.890)
OP2: (93.352,103.598,76.415)
C3': (90.162,100.264,73.877)
C1': (88.371,101.455,74.847)
C5': (91.774,101.013,75.663)
O4': (89.415,101.380,75.807)
C8: (89.122,103.888,74.641)
O2': (87.995,99.197,74.151)
C6: (86.718,105.475,72.612)
C5: (87.599,104.704,73.404)
C4: (87.297,103.363,73.550)
P: (93.261,103.099,75.018)
C4': (90.423,100.431,75.366)
C2': (88.650,100.388,73.782)
C2: (85.498,103.540,72.297)
N1: (85.658,104.846,72.065)
N3: (86.249,102.713,73.015)
N6: (86.868,106.779,72.375)
N7: (88.754,105.022,74.101)
N9: (88.280,102.842,74.363)
O5': (91.945,102.222,74.897)
O3': (90.671,99.032,73.394)
C4: (90.340,108.504,74.019)
N3: (90.302,107.341,74.757)
OP1: (96.428,112.735,76.399)
OP2: (94.462,112.497,74.750)
C2: (91.178,106.951,75.740)
C1': (93.179,107.445,77.039)
C3': (95.419,107.715,76.343)
O5': (95.128,110.617,76.237)
O4': (93.702,108.611,77.655)
C5': (95.639,110.021,77.435)
P: (95.075,112.194,76.071)
C4': (95.152,108.603,77.548)
C2': (94.367,106.626,76.524)
O2': (94.719,105.690,77.520)
N1: (92.214,107.834,75.995)
O4: (89.430,108.737,73.215)
O2: (91.043,105.906,76.343)
C6: (92.321,109.018,75.287)
C5: (91.443,109.375,74.331)
O3': (96.752,107.219,76.348)
Image (generated by PyMOL):
PyMOL image
show in jmol