Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XNZ:A10:A28
Extra
PDB:
ATOM 1 O3' U A 9 24.061 1.435 19.112 1.00 25.10 O
ATOM 2 P C A 10 25.180 0.310 19.436 1.00 23.27 P
ATOM 3 OP1 C A 10 26.406 1.026 19.846 1.00 26.12 O
ATOM 4 OP2 C A 10 25.268 -0.621 18.287 1.00 24.23 O
ATOM 5 O5' C A 10 24.615 -0.602 20.633 1.00 22.74 O
ATOM 6 C5' C A 10 24.371 -0.091 21.952 1.00 22.00 C
ATOM 7 C4' C A 10 23.855 -1.182 22.893 1.00 22.64 C
ATOM 8 O4' C A 10 22.501 -1.574 22.537 1.00 24.09 O
ATOM 9 C3' C A 10 24.596 -2.509 22.852 1.00 22.83 C
ATOM 10 O3' C A 10 25.818 -2.433 23.563 1.00 22.47 O
ATOM 11 C2' C A 10 23.571 -3.432 23.513 1.00 23.13 C
ATOM 12 O2' C A 10 23.458 -3.280 24.925 1.00 24.85 O
ATOM 13 C1' C A 10 22.299 -2.955 22.822 1.00 23.05 C
ATOM 14 N1 C A 10 22.078 -3.727 21.552 1.00 23.52 N
ATOM 15 C2 C A 10 21.573 -5.047 21.608 1.00 22.90 C
ATOM 16 O2 C A 10 21.285 -5.565 22.699 1.00 23.57 O
ATOM 17 N3 C A 10 21.402 -5.727 20.445 1.00 23.29 N
ATOM 18 C4 C A 10 21.720 -5.165 19.272 1.00 21.64 C
ATOM 19 N4 C A 10 21.527 -5.890 18.162 1.00 23.33 N
ATOM 20 C5 C A 10 22.245 -3.843 19.186 1.00 21.21 C
ATOM 21 C6 C A 10 22.408 -3.169 20.338 1.00 22.44 C
ATOM 22 P G A 11 27.063 -3.336 23.088 1.00 20.72 P
ATOM 23 OP1 G A 11 28.183 -2.991 23.988 1.00 22.10 O
ATOM 24 OP2 G A 11 27.207 -3.264 21.613 1.00 21.94 O
ATOM 25 O5' G A 11 26.516 -4.815 23.344 1.00 20.40 O
TER
ATOM 1 O3' C B 27 17.735 -17.005 17.111 1.00 25.49 O
ATOM 2 P A B 28 16.417 -16.201 17.502 1.00 26.75 P
ATOM 3 OP1 A B 28 15.455 -17.249 17.931 1.00 28.30 O
ATOM 4 OP2 A B 28 16.043 -15.214 16.473 1.00 26.77 O
ATOM 5 O5' A B 28 16.838 -15.361 18.803 1.00 26.10 O
ATOM 6 C5' A B 28 17.300 -16.052 19.976 1.00 28.22 C
ATOM 7 C4' A B 28 17.868 -15.054 20.966 1.00 28.94 C
ATOM 8 O4' A B 28 19.081 -14.452 20.440 1.00 28.13 O
ATOM 9 C3' A B 28 16.980 -13.843 21.215 1.00 29.77 C
ATOM 10 O3' A B 28 15.938 -14.192 22.113 1.00 32.82 O
ATOM 11 C2' A B 28 17.977 -12.839 21.787 1.00 27.98 C
ATOM 12 O2' A B 28 18.370 -13.129 23.118 1.00 28.50 O
ATOM 13 C1' A B 28 19.147 -13.097 20.849 1.00 26.47 C
ATOM 14 N9 A B 28 19.152 -12.273 19.654 1.00 24.71 N
ATOM 15 C8 A B 28 18.731 -12.632 18.397 1.00 25.09 C
ATOM 16 N7 A B 28 18.865 -11.686 17.500 1.00 24.65 N
ATOM 17 C5 A B 28 19.419 -10.643 18.214 1.00 23.49 C
ATOM 18 C6 A B 28 19.810 -9.348 17.833 1.00 23.61 C
ATOM 19 N6 A B 28 19.670 -8.901 16.577 1.00 25.21 N
ATOM 20 N1 A B 28 20.333 -8.547 18.795 1.00 22.43 N
ATOM 21 C2 A B 28 20.447 -9.014 20.043 1.00 23.36 C
ATOM 22 N3 A B 28 20.122 -10.219 20.521 1.00 22.96 N
ATOM 23 C4 A B 28 19.602 -10.984 19.544 1.00 23.67 C
ATOM 24 P A B 29 14.690 -13.212 22.347 1.00 34.37 P
ATOM 25 OP1 A B 29 13.828 -13.920 23.340 1.00 34.21 O
ATOM 26 OP2 A B 29 14.139 -12.740 21.049 1.00 33.90 O
ATOM 27 O5' A B 29 15.332 -11.920 23.036 1.00 33.68 O
TER
ATOM 2 P C A 10 25.180 0.310 19.436 1.00 23.27 P
ATOM 3 OP1 C A 10 26.406 1.026 19.846 1.00 26.12 O
ATOM 4 OP2 C A 10 25.268 -0.621 18.287 1.00 24.23 O
ATOM 5 O5' C A 10 24.615 -0.602 20.633 1.00 22.74 O
ATOM 6 C5' C A 10 24.371 -0.091 21.952 1.00 22.00 C
ATOM 7 C4' C A 10 23.855 -1.182 22.893 1.00 22.64 C
ATOM 8 O4' C A 10 22.501 -1.574 22.537 1.00 24.09 O
ATOM 9 C3' C A 10 24.596 -2.509 22.852 1.00 22.83 C
ATOM 10 O3' C A 10 25.818 -2.433 23.563 1.00 22.47 O
ATOM 11 C2' C A 10 23.571 -3.432 23.513 1.00 23.13 C
ATOM 12 O2' C A 10 23.458 -3.280 24.925 1.00 24.85 O
ATOM 13 C1' C A 10 22.299 -2.955 22.822 1.00 23.05 C
ATOM 14 N1 C A 10 22.078 -3.727 21.552 1.00 23.52 N
ATOM 15 C2 C A 10 21.573 -5.047 21.608 1.00 22.90 C
ATOM 16 O2 C A 10 21.285 -5.565 22.699 1.00 23.57 O
ATOM 17 N3 C A 10 21.402 -5.727 20.445 1.00 23.29 N
ATOM 18 C4 C A 10 21.720 -5.165 19.272 1.00 21.64 C
ATOM 19 N4 C A 10 21.527 -5.890 18.162 1.00 23.33 N
ATOM 20 C5 C A 10 22.245 -3.843 19.186 1.00 21.21 C
ATOM 21 C6 C A 10 22.408 -3.169 20.338 1.00 22.44 C
ATOM 22 P G A 11 27.063 -3.336 23.088 1.00 20.72 P
ATOM 23 OP1 G A 11 28.183 -2.991 23.988 1.00 22.10 O
ATOM 24 OP2 G A 11 27.207 -3.264 21.613 1.00 21.94 O
ATOM 25 O5' G A 11 26.516 -4.815 23.344 1.00 20.40 O
TER
ATOM 1 O3' C B 27 17.735 -17.005 17.111 1.00 25.49 O
ATOM 2 P A B 28 16.417 -16.201 17.502 1.00 26.75 P
ATOM 3 OP1 A B 28 15.455 -17.249 17.931 1.00 28.30 O
ATOM 4 OP2 A B 28 16.043 -15.214 16.473 1.00 26.77 O
ATOM 5 O5' A B 28 16.838 -15.361 18.803 1.00 26.10 O
ATOM 6 C5' A B 28 17.300 -16.052 19.976 1.00 28.22 C
ATOM 7 C4' A B 28 17.868 -15.054 20.966 1.00 28.94 C
ATOM 8 O4' A B 28 19.081 -14.452 20.440 1.00 28.13 O
ATOM 9 C3' A B 28 16.980 -13.843 21.215 1.00 29.77 C
ATOM 10 O3' A B 28 15.938 -14.192 22.113 1.00 32.82 O
ATOM 11 C2' A B 28 17.977 -12.839 21.787 1.00 27.98 C
ATOM 12 O2' A B 28 18.370 -13.129 23.118 1.00 28.50 O
ATOM 13 C1' A B 28 19.147 -13.097 20.849 1.00 26.47 C
ATOM 14 N9 A B 28 19.152 -12.273 19.654 1.00 24.71 N
ATOM 15 C8 A B 28 18.731 -12.632 18.397 1.00 25.09 C
ATOM 16 N7 A B 28 18.865 -11.686 17.500 1.00 24.65 N
ATOM 17 C5 A B 28 19.419 -10.643 18.214 1.00 23.49 C
ATOM 18 C6 A B 28 19.810 -9.348 17.833 1.00 23.61 C
ATOM 19 N6 A B 28 19.670 -8.901 16.577 1.00 25.21 N
ATOM 20 N1 A B 28 20.333 -8.547 18.795 1.00 22.43 N
ATOM 21 C2 A B 28 20.447 -9.014 20.043 1.00 23.36 C
ATOM 22 N3 A B 28 20.122 -10.219 20.521 1.00 22.96 N
ATOM 23 C4 A B 28 19.602 -10.984 19.544 1.00 23.67 C
ATOM 24 P A B 29 14.690 -13.212 22.347 1.00 34.37 P
ATOM 25 OP1 A B 29 13.828 -13.920 23.340 1.00 34.21 O
ATOM 26 OP2 A B 29 14.139 -12.740 21.049 1.00 33.90 O
ATOM 27 O5' A B 29 15.332 -11.920 23.036 1.00 33.68 O
TER
Atoms:
C2: (21.573,-5.047,21.608)
OP1: (26.406,1.026,19.846)
OP2: (25.268,-0.621,18.287)
C4: (21.720,-5.165,19.272)
O5': (24.615,-0.602,20.633)
C3': (24.596,-2.509,22.852)
C1': (22.299,-2.955,22.822)
O4': (22.501,-1.574,22.537)
C5': (24.371,-0.091,21.952)
P: (25.180,0.310,19.436)
O2: (21.285,-5.565,22.699)
C4': (23.855,-1.182,22.893)
C2': (23.571,-3.432,23.513)
O2': (23.458,-3.280,24.925)
N1: (22.078,-3.727,21.552)
N3: (21.402,-5.727,20.445)
N4: (21.527,-5.890,18.162)
C6: (22.408,-3.169,20.338)
C5: (22.245,-3.843,19.186)
O3': (25.818,-2.433,23.563)
OP1: (26.406,1.026,19.846)
OP2: (25.268,-0.621,18.287)
C4: (21.720,-5.165,19.272)
O5': (24.615,-0.602,20.633)
C3': (24.596,-2.509,22.852)
C1': (22.299,-2.955,22.822)
O4': (22.501,-1.574,22.537)
C5': (24.371,-0.091,21.952)
P: (25.180,0.310,19.436)
O2: (21.285,-5.565,22.699)
C4': (23.855,-1.182,22.893)
C2': (23.571,-3.432,23.513)
O2': (23.458,-3.280,24.925)
N1: (22.078,-3.727,21.552)
N3: (21.402,-5.727,20.445)
N4: (21.527,-5.890,18.162)
C6: (22.408,-3.169,20.338)
C5: (22.245,-3.843,19.186)
O3': (25.818,-2.433,23.563)
OP1: (15.455,-17.249,17.931)
OP2: (16.043,-15.214,16.473)
C3': (16.980,-13.843,21.215)
C1': (19.147,-13.097,20.849)
C5': (17.300,-16.052,19.976)
O4': (19.081,-14.452,20.440)
C8: (18.731,-12.632,18.397)
O2': (18.370,-13.129,23.118)
C6: (19.810,-9.348,17.833)
C5: (19.419,-10.643,18.214)
C4: (19.602,-10.984,19.544)
P: (16.417,-16.201,17.502)
C4': (17.868,-15.054,20.966)
C2': (17.977,-12.839,21.787)
C2: (20.447,-9.014,20.043)
N1: (20.333,-8.547,18.795)
N3: (20.122,-10.219,20.521)
N6: (19.670,-8.901,16.577)
N7: (18.865,-11.686,17.500)
N9: (19.152,-12.273,19.654)
O5': (16.838,-15.361,18.803)
O3': (15.938,-14.192,22.113)
OP2: (16.043,-15.214,16.473)
C3': (16.980,-13.843,21.215)
C1': (19.147,-13.097,20.849)
C5': (17.300,-16.052,19.976)
O4': (19.081,-14.452,20.440)
C8: (18.731,-12.632,18.397)
O2': (18.370,-13.129,23.118)
C6: (19.810,-9.348,17.833)
C5: (19.419,-10.643,18.214)
C4: (19.602,-10.984,19.544)
P: (16.417,-16.201,17.502)
C4': (17.868,-15.054,20.966)
C2': (17.977,-12.839,21.787)
C2: (20.447,-9.014,20.043)
N1: (20.333,-8.547,18.795)
N3: (20.122,-10.219,20.521)
N6: (19.670,-8.901,16.577)
N7: (18.865,-11.686,17.500)
N9: (19.152,-12.273,19.654)
O5': (16.838,-15.361,18.803)
O3': (15.938,-14.192,22.113)
Image (generated by PyMOL):