Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:E62:E19
Extra
PDB:
ATOM 1 O3' A A 61 -11.011 18.786 118.064 1.00 98.37 O
ATOM 2 P C A 62 -12.223 17.838 118.534 1.00 93.11 P
ATOM 3 OP1 C A 62 -13.487 18.513 118.150 1.00 99.39 O
ATOM 4 OP2 C A 62 -11.997 17.455 119.951 1.00 95.44 O
ATOM 5 O5' C A 62 -12.068 16.530 117.640 1.00 89.60 O
ATOM 6 C5' C A 62 -12.687 16.442 116.362 1.00 82.40 C
ATOM 7 C4' C A 62 -12.588 15.032 115.834 1.00 85.69 C
ATOM 8 O4' C A 62 -11.198 14.716 115.558 1.00 88.73 O
ATOM 9 C3' C A 62 -13.030 13.950 116.803 1.00 85.69 C
ATOM 10 O3' C A 62 -14.437 13.770 116.766 1.00 91.94 O
ATOM 11 C2' C A 62 -12.284 12.733 116.276 1.00 88.89 C
ATOM 12 O2' C A 62 -12.899 12.166 115.138 1.00 75.93 O
ATOM 13 C1' C A 62 -10.943 13.359 115.886 1.00 88.18 C
ATOM 14 N1 C A 62 -9.966 13.332 116.986 1.00 84.90 N
ATOM 15 C2 C A 62 -9.241 12.160 117.219 1.00 84.67 C
ATOM 16 O2 C A 62 -9.436 11.176 116.485 1.00 84.30 O
ATOM 17 N3 C A 62 -8.348 12.128 118.237 1.00 84.94 N
ATOM 18 C4 C A 62 -8.170 13.208 119.003 1.00 85.62 C
ATOM 19 N4 C A 62 -7.282 13.132 119.998 1.00 84.53 N
ATOM 20 C5 C A 62 -8.894 14.415 118.784 1.00 86.00 C
ATOM 21 C6 C A 62 -9.773 14.433 117.774 1.00 84.87 C
ATOM 22 P C A 63 -15.218 13.357 118.106 1.00 94.68 P
ATOM 23 OP1 C A 63 -16.674 13.414 117.826 1.00107.97 O
ATOM 24 OP2 C A 63 -14.653 14.163 119.216 1.00102.09 O
ATOM 25 O5' C A 63 -14.805 11.837 118.333 1.00 93.27 O
TER
ATOM 1 O3' G B 18 -2.770 3.907 125.732 1.00 93.39 O
ATOM 2 P A B 19 -1.737 4.272 124.552 1.00 92.51 P
ATOM 3 OP1 A B 19 -0.878 3.087 124.310 1.00 93.83 O
ATOM 4 OP2 A B 19 -1.110 5.576 124.896 1.00 81.72 O
ATOM 5 O5' A B 19 -2.669 4.482 123.274 1.00 90.27 O
ATOM 6 C5' A B 19 -3.378 3.386 122.698 1.00 82.31 C
ATOM 7 C4' A B 19 -4.365 3.876 121.660 1.00 75.03 C
ATOM 8 O4' A B 19 -5.362 4.725 122.295 1.00 66.94 O
ATOM 9 C3' A B 19 -3.795 4.749 120.555 1.00 74.78 C
ATOM 10 O3' A B 19 -3.217 3.982 119.509 1.00 77.21 O
ATOM 11 C2' A B 19 -5.034 5.491 120.078 1.00 76.77 C
ATOM 12 O2' A B 19 -5.859 4.701 119.246 1.00 81.39 O
ATOM 13 C1' A B 19 -5.734 5.770 121.407 1.00 71.08 C
ATOM 14 N9 A B 19 -5.289 7.042 121.977 1.00 66.78 N
ATOM 15 C8 A B 19 -4.405 7.259 123.008 1.00 66.01 C
ATOM 16 N7 A B 19 -4.201 8.528 123.272 1.00 64.01 N
ATOM 17 C5 A B 19 -5.007 9.191 122.355 1.00 62.86 C
ATOM 18 C6 A B 19 -5.242 10.554 122.114 1.00 61.47 C
ATOM 19 N6 A B 19 -4.664 11.538 122.801 1.00 61.56 N
ATOM 20 N1 A B 19 -6.103 10.878 121.126 1.00 63.78 N
ATOM 21 C2 A B 19 -6.683 9.892 120.432 1.00 65.30 C
ATOM 22 N3 A B 19 -6.544 8.575 120.562 1.00 67.10 N
ATOM 23 C4 A B 19 -5.683 8.288 121.553 1.00 66.17 C
ATOM 24 P G B 20 -2.002 4.598 118.658 1.00 82.37 P
ATOM 25 OP1 G B 20 -1.721 3.707 117.502 1.00 78.18 O
ATOM 26 OP2 G B 20 -0.913 4.920 119.620 1.00 74.33 O
ATOM 27 O5' G B 20 -2.593 5.963 118.093 1.00 75.98 O
TER
ATOM 2 P C A 62 -12.223 17.838 118.534 1.00 93.11 P
ATOM 3 OP1 C A 62 -13.487 18.513 118.150 1.00 99.39 O
ATOM 4 OP2 C A 62 -11.997 17.455 119.951 1.00 95.44 O
ATOM 5 O5' C A 62 -12.068 16.530 117.640 1.00 89.60 O
ATOM 6 C5' C A 62 -12.687 16.442 116.362 1.00 82.40 C
ATOM 7 C4' C A 62 -12.588 15.032 115.834 1.00 85.69 C
ATOM 8 O4' C A 62 -11.198 14.716 115.558 1.00 88.73 O
ATOM 9 C3' C A 62 -13.030 13.950 116.803 1.00 85.69 C
ATOM 10 O3' C A 62 -14.437 13.770 116.766 1.00 91.94 O
ATOM 11 C2' C A 62 -12.284 12.733 116.276 1.00 88.89 C
ATOM 12 O2' C A 62 -12.899 12.166 115.138 1.00 75.93 O
ATOM 13 C1' C A 62 -10.943 13.359 115.886 1.00 88.18 C
ATOM 14 N1 C A 62 -9.966 13.332 116.986 1.00 84.90 N
ATOM 15 C2 C A 62 -9.241 12.160 117.219 1.00 84.67 C
ATOM 16 O2 C A 62 -9.436 11.176 116.485 1.00 84.30 O
ATOM 17 N3 C A 62 -8.348 12.128 118.237 1.00 84.94 N
ATOM 18 C4 C A 62 -8.170 13.208 119.003 1.00 85.62 C
ATOM 19 N4 C A 62 -7.282 13.132 119.998 1.00 84.53 N
ATOM 20 C5 C A 62 -8.894 14.415 118.784 1.00 86.00 C
ATOM 21 C6 C A 62 -9.773 14.433 117.774 1.00 84.87 C
ATOM 22 P C A 63 -15.218 13.357 118.106 1.00 94.68 P
ATOM 23 OP1 C A 63 -16.674 13.414 117.826 1.00107.97 O
ATOM 24 OP2 C A 63 -14.653 14.163 119.216 1.00102.09 O
ATOM 25 O5' C A 63 -14.805 11.837 118.333 1.00 93.27 O
TER
ATOM 1 O3' G B 18 -2.770 3.907 125.732 1.00 93.39 O
ATOM 2 P A B 19 -1.737 4.272 124.552 1.00 92.51 P
ATOM 3 OP1 A B 19 -0.878 3.087 124.310 1.00 93.83 O
ATOM 4 OP2 A B 19 -1.110 5.576 124.896 1.00 81.72 O
ATOM 5 O5' A B 19 -2.669 4.482 123.274 1.00 90.27 O
ATOM 6 C5' A B 19 -3.378 3.386 122.698 1.00 82.31 C
ATOM 7 C4' A B 19 -4.365 3.876 121.660 1.00 75.03 C
ATOM 8 O4' A B 19 -5.362 4.725 122.295 1.00 66.94 O
ATOM 9 C3' A B 19 -3.795 4.749 120.555 1.00 74.78 C
ATOM 10 O3' A B 19 -3.217 3.982 119.509 1.00 77.21 O
ATOM 11 C2' A B 19 -5.034 5.491 120.078 1.00 76.77 C
ATOM 12 O2' A B 19 -5.859 4.701 119.246 1.00 81.39 O
ATOM 13 C1' A B 19 -5.734 5.770 121.407 1.00 71.08 C
ATOM 14 N9 A B 19 -5.289 7.042 121.977 1.00 66.78 N
ATOM 15 C8 A B 19 -4.405 7.259 123.008 1.00 66.01 C
ATOM 16 N7 A B 19 -4.201 8.528 123.272 1.00 64.01 N
ATOM 17 C5 A B 19 -5.007 9.191 122.355 1.00 62.86 C
ATOM 18 C6 A B 19 -5.242 10.554 122.114 1.00 61.47 C
ATOM 19 N6 A B 19 -4.664 11.538 122.801 1.00 61.56 N
ATOM 20 N1 A B 19 -6.103 10.878 121.126 1.00 63.78 N
ATOM 21 C2 A B 19 -6.683 9.892 120.432 1.00 65.30 C
ATOM 22 N3 A B 19 -6.544 8.575 120.562 1.00 67.10 N
ATOM 23 C4 A B 19 -5.683 8.288 121.553 1.00 66.17 C
ATOM 24 P G B 20 -2.002 4.598 118.658 1.00 82.37 P
ATOM 25 OP1 G B 20 -1.721 3.707 117.502 1.00 78.18 O
ATOM 26 OP2 G B 20 -0.913 4.920 119.620 1.00 74.33 O
ATOM 27 O5' G B 20 -2.593 5.963 118.093 1.00 75.98 O
TER
Atoms:
C2: (-9.241,12.160,117.219)
OP1: (-13.487,18.513,118.150)
OP2: (-11.997,17.455,119.951)
C4: (-8.170,13.208,119.003)
O5': (-12.068,16.530,117.640)
C3': (-13.030,13.950,116.803)
C1': (-10.943,13.359,115.886)
O4': (-11.198,14.716,115.558)
C5': (-12.687,16.442,116.362)
P: (-12.223,17.838,118.534)
O2: (-9.436,11.176,116.485)
C4': (-12.588,15.032,115.834)
C2': (-12.284,12.733,116.276)
O2': (-12.899,12.166,115.138)
N1: (-9.966,13.332,116.986)
N3: (-8.348,12.128,118.237)
N4: (-7.282,13.132,119.998)
C6: (-9.773,14.433,117.774)
C5: (-8.894,14.415,118.784)
O3': (-14.437,13.770,116.766)
OP1: (-13.487,18.513,118.150)
OP2: (-11.997,17.455,119.951)
C4: (-8.170,13.208,119.003)
O5': (-12.068,16.530,117.640)
C3': (-13.030,13.950,116.803)
C1': (-10.943,13.359,115.886)
O4': (-11.198,14.716,115.558)
C5': (-12.687,16.442,116.362)
P: (-12.223,17.838,118.534)
O2: (-9.436,11.176,116.485)
C4': (-12.588,15.032,115.834)
C2': (-12.284,12.733,116.276)
O2': (-12.899,12.166,115.138)
N1: (-9.966,13.332,116.986)
N3: (-8.348,12.128,118.237)
N4: (-7.282,13.132,119.998)
C6: (-9.773,14.433,117.774)
C5: (-8.894,14.415,118.784)
O3': (-14.437,13.770,116.766)
OP1: (-0.878,3.087,124.310)
OP2: (-1.110,5.576,124.896)
C3': (-3.795,4.749,120.555)
C1': (-5.734,5.770,121.407)
C5': (-3.378,3.386,122.698)
O4': (-5.362,4.725,122.295)
C8: (-4.405,7.259,123.008)
O2': (-5.859,4.701,119.246)
C6: (-5.242,10.554,122.114)
C5: (-5.007,9.191,122.355)
C4: (-5.683,8.288,121.553)
P: (-1.737,4.272,124.552)
C4': (-4.365,3.876,121.660)
C2': (-5.034,5.491,120.078)
C2: (-6.683,9.892,120.432)
N1: (-6.103,10.878,121.126)
N3: (-6.544,8.575,120.562)
N6: (-4.664,11.538,122.801)
N7: (-4.201,8.528,123.272)
N9: (-5.289,7.042,121.977)
O5': (-2.669,4.482,123.274)
O3': (-3.217,3.982,119.509)
OP2: (-1.110,5.576,124.896)
C3': (-3.795,4.749,120.555)
C1': (-5.734,5.770,121.407)
C5': (-3.378,3.386,122.698)
O4': (-5.362,4.725,122.295)
C8: (-4.405,7.259,123.008)
O2': (-5.859,4.701,119.246)
C6: (-5.242,10.554,122.114)
C5: (-5.007,9.191,122.355)
C4: (-5.683,8.288,121.553)
P: (-1.737,4.272,124.552)
C4': (-4.365,3.876,121.660)
C2': (-5.034,5.491,120.078)
C2: (-6.683,9.892,120.432)
N1: (-6.103,10.878,121.126)
N3: (-6.544,8.575,120.562)
N6: (-4.664,11.538,122.801)
N7: (-4.201,8.528,123.272)
N9: (-5.289,7.042,121.977)
O5': (-2.669,4.482,123.274)
O3': (-3.217,3.982,119.509)
Image (generated by PyMOL):