Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KFU:N12:N20
Extra
PDB:
ATOM 1 O3' U A 11 1.516 -30.209 55.173 1.00 58.59 O
ATOM 2 P C A 12 0.460 -29.052 54.823 1.00 84.62 P
ATOM 3 OP1 C A 12 0.767 -28.577 53.450 1.00129.62 O
ATOM 4 OP2 C A 12 0.495 -28.075 55.939 1.00 28.61 O
ATOM 5 O5' C A 12 -0.921 -29.842 54.830 1.00 86.17 O
ATOM 6 C5' C A 12 -2.126 -29.211 55.238 1.00 78.02 C
ATOM 7 C4' C A 12 -3.310 -30.132 55.090 1.00108.03 C
ATOM 8 O4' C A 12 -3.218 -31.197 56.081 1.00 32.82 O
ATOM 9 C3' C A 12 -4.666 -29.470 55.302 1.00 95.62 C
ATOM 10 O3' C A 12 -5.635 -30.092 54.468 1.00 55.94 O
ATOM 11 C2' C A 12 -4.969 -29.792 56.756 1.00141.77 C
ATOM 12 O2' C A 12 -6.338 -29.764 57.091 1.00171.84 O
ATOM 13 C1' C A 12 -4.377 -31.193 56.890 1.00 72.36 C
ATOM 14 N1 C A 12 -3.983 -31.532 58.269 1.00 88.87 N
ATOM 15 C2 C A 12 -4.408 -32.731 58.837 1.00 66.91 C
ATOM 16 O2 C A 12 -5.085 -33.512 58.158 1.00 83.84 O
ATOM 17 N3 C A 12 -4.059 -33.009 60.110 1.00 76.13 N
ATOM 18 C4 C A 12 -3.327 -32.139 60.807 1.00 84.75 C
ATOM 19 N4 C A 12 -3.000 -32.454 62.061 1.00100.65 N
ATOM 20 C5 C A 12 -2.890 -30.904 60.256 1.00 99.01 C
ATOM 21 C6 C A 12 -3.245 -30.641 58.996 1.00123.97 C
ATOM 22 P A A 13 -6.966 -29.299 54.061 1.00105.80 P
ATOM 23 OP1 A A 13 -6.900 -29.055 52.599 1.00173.72 O
ATOM 24 OP2 A A 13 -7.071 -28.138 54.973 1.00 63.33 O
ATOM 25 O5' A A 13 -8.116 -30.349 54.385 1.00129.13 O
TER
ATOM 1 O3' G B 19 -10.746 -41.056 62.660 1.00118.67 O
ATOM 2 P A B 20 -9.859 -42.372 62.395 1.00122.92 P
ATOM 3 OP1 A B 20 -10.765 -43.404 61.838 1.00145.53 O
ATOM 4 OP2 A B 20 -9.126 -42.670 63.651 1.00130.46 O
ATOM 5 O5' A B 20 -8.838 -41.888 61.274 1.00178.71 O
ATOM 6 C5' A B 20 -9.263 -41.716 59.927 1.00176.21 C
ATOM 7 C4' A B 20 -8.103 -41.764 58.963 1.00126.04 C
ATOM 8 O4' A B 20 -7.467 -40.457 58.910 1.00 45.41 O
ATOM 9 C3' A B 20 -7.002 -42.764 59.316 1.00 99.64 C
ATOM 10 O3' A B 20 -6.466 -43.317 58.115 1.00117.19 O
ATOM 11 C2' A B 20 -5.956 -41.881 59.989 1.00113.06 C
ATOM 12 O2' A B 20 -4.639 -42.385 59.950 1.00134.66 O
ATOM 13 C1' A B 20 -6.091 -40.585 59.199 1.00 81.31 C
ATOM 14 N9 A B 20 -5.665 -39.397 59.939 1.00 45.78 N
ATOM 15 C8 A B 20 -5.957 -39.087 61.240 1.00 65.71 C
ATOM 16 N7 A B 20 -5.426 -37.966 61.651 1.00 78.74 N
ATOM 17 C5 A B 20 -4.731 -37.512 60.547 1.00 83.03 C
ATOM 18 C6 A B 20 -3.954 -36.366 60.343 1.00 63.88 C
ATOM 19 N6 A B 20 -3.747 -35.446 61.284 1.00 95.36 N
ATOM 20 N1 A B 20 -3.390 -36.204 59.128 1.00 29.15 N
ATOM 21 C2 A B 20 -3.606 -37.137 58.191 1.00 96.90 C
ATOM 22 N3 A B 20 -4.319 -38.258 58.263 1.00 87.63 N
ATOM 23 C4 A B 20 -4.863 -38.384 59.484 1.00 70.96 C
ATOM 24 P G B 21 -5.222 -44.335 58.169 1.00126.38 P
ATOM 25 OP1 G B 21 -5.506 -45.425 57.204 1.00148.46 O
ATOM 26 OP2 G B 21 -4.994 -44.684 59.593 1.00 30.04 O
ATOM 27 O5' G B 21 -4.024 -43.438 57.638 1.00 67.73 O
TER
ATOM 2 P C A 12 0.460 -29.052 54.823 1.00 84.62 P
ATOM 3 OP1 C A 12 0.767 -28.577 53.450 1.00129.62 O
ATOM 4 OP2 C A 12 0.495 -28.075 55.939 1.00 28.61 O
ATOM 5 O5' C A 12 -0.921 -29.842 54.830 1.00 86.17 O
ATOM 6 C5' C A 12 -2.126 -29.211 55.238 1.00 78.02 C
ATOM 7 C4' C A 12 -3.310 -30.132 55.090 1.00108.03 C
ATOM 8 O4' C A 12 -3.218 -31.197 56.081 1.00 32.82 O
ATOM 9 C3' C A 12 -4.666 -29.470 55.302 1.00 95.62 C
ATOM 10 O3' C A 12 -5.635 -30.092 54.468 1.00 55.94 O
ATOM 11 C2' C A 12 -4.969 -29.792 56.756 1.00141.77 C
ATOM 12 O2' C A 12 -6.338 -29.764 57.091 1.00171.84 O
ATOM 13 C1' C A 12 -4.377 -31.193 56.890 1.00 72.36 C
ATOM 14 N1 C A 12 -3.983 -31.532 58.269 1.00 88.87 N
ATOM 15 C2 C A 12 -4.408 -32.731 58.837 1.00 66.91 C
ATOM 16 O2 C A 12 -5.085 -33.512 58.158 1.00 83.84 O
ATOM 17 N3 C A 12 -4.059 -33.009 60.110 1.00 76.13 N
ATOM 18 C4 C A 12 -3.327 -32.139 60.807 1.00 84.75 C
ATOM 19 N4 C A 12 -3.000 -32.454 62.061 1.00100.65 N
ATOM 20 C5 C A 12 -2.890 -30.904 60.256 1.00 99.01 C
ATOM 21 C6 C A 12 -3.245 -30.641 58.996 1.00123.97 C
ATOM 22 P A A 13 -6.966 -29.299 54.061 1.00105.80 P
ATOM 23 OP1 A A 13 -6.900 -29.055 52.599 1.00173.72 O
ATOM 24 OP2 A A 13 -7.071 -28.138 54.973 1.00 63.33 O
ATOM 25 O5' A A 13 -8.116 -30.349 54.385 1.00129.13 O
TER
ATOM 1 O3' G B 19 -10.746 -41.056 62.660 1.00118.67 O
ATOM 2 P A B 20 -9.859 -42.372 62.395 1.00122.92 P
ATOM 3 OP1 A B 20 -10.765 -43.404 61.838 1.00145.53 O
ATOM 4 OP2 A B 20 -9.126 -42.670 63.651 1.00130.46 O
ATOM 5 O5' A B 20 -8.838 -41.888 61.274 1.00178.71 O
ATOM 6 C5' A B 20 -9.263 -41.716 59.927 1.00176.21 C
ATOM 7 C4' A B 20 -8.103 -41.764 58.963 1.00126.04 C
ATOM 8 O4' A B 20 -7.467 -40.457 58.910 1.00 45.41 O
ATOM 9 C3' A B 20 -7.002 -42.764 59.316 1.00 99.64 C
ATOM 10 O3' A B 20 -6.466 -43.317 58.115 1.00117.19 O
ATOM 11 C2' A B 20 -5.956 -41.881 59.989 1.00113.06 C
ATOM 12 O2' A B 20 -4.639 -42.385 59.950 1.00134.66 O
ATOM 13 C1' A B 20 -6.091 -40.585 59.199 1.00 81.31 C
ATOM 14 N9 A B 20 -5.665 -39.397 59.939 1.00 45.78 N
ATOM 15 C8 A B 20 -5.957 -39.087 61.240 1.00 65.71 C
ATOM 16 N7 A B 20 -5.426 -37.966 61.651 1.00 78.74 N
ATOM 17 C5 A B 20 -4.731 -37.512 60.547 1.00 83.03 C
ATOM 18 C6 A B 20 -3.954 -36.366 60.343 1.00 63.88 C
ATOM 19 N6 A B 20 -3.747 -35.446 61.284 1.00 95.36 N
ATOM 20 N1 A B 20 -3.390 -36.204 59.128 1.00 29.15 N
ATOM 21 C2 A B 20 -3.606 -37.137 58.191 1.00 96.90 C
ATOM 22 N3 A B 20 -4.319 -38.258 58.263 1.00 87.63 N
ATOM 23 C4 A B 20 -4.863 -38.384 59.484 1.00 70.96 C
ATOM 24 P G B 21 -5.222 -44.335 58.169 1.00126.38 P
ATOM 25 OP1 G B 21 -5.506 -45.425 57.204 1.00148.46 O
ATOM 26 OP2 G B 21 -4.994 -44.684 59.593 1.00 30.04 O
ATOM 27 O5' G B 21 -4.024 -43.438 57.638 1.00 67.73 O
TER
Atoms:
C2: (-4.408,-32.731,58.837)
OP1: (0.767,-28.577,53.450)
OP2: (0.495,-28.075,55.939)
C4: (-3.327,-32.139,60.807)
O5': (-0.921,-29.842,54.830)
C3': (-4.666,-29.470,55.302)
C1': (-4.377,-31.193,56.890)
O4': (-3.218,-31.197,56.081)
C5': (-2.126,-29.211,55.238)
P: (0.460,-29.052,54.823)
O2: (-5.085,-33.512,58.158)
C4': (-3.310,-30.132,55.090)
C2': (-4.969,-29.792,56.756)
O2': (-6.338,-29.764,57.091)
N1: (-3.983,-31.532,58.269)
N3: (-4.059,-33.009,60.110)
N4: (-3.000,-32.454,62.061)
C6: (-3.245,-30.641,58.996)
C5: (-2.890,-30.904,60.256)
O3': (-5.635,-30.092,54.468)
OP1: (0.767,-28.577,53.450)
OP2: (0.495,-28.075,55.939)
C4: (-3.327,-32.139,60.807)
O5': (-0.921,-29.842,54.830)
C3': (-4.666,-29.470,55.302)
C1': (-4.377,-31.193,56.890)
O4': (-3.218,-31.197,56.081)
C5': (-2.126,-29.211,55.238)
P: (0.460,-29.052,54.823)
O2: (-5.085,-33.512,58.158)
C4': (-3.310,-30.132,55.090)
C2': (-4.969,-29.792,56.756)
O2': (-6.338,-29.764,57.091)
N1: (-3.983,-31.532,58.269)
N3: (-4.059,-33.009,60.110)
N4: (-3.000,-32.454,62.061)
C6: (-3.245,-30.641,58.996)
C5: (-2.890,-30.904,60.256)
O3': (-5.635,-30.092,54.468)
OP1: (-10.765,-43.404,61.838)
OP2: (-9.126,-42.670,63.651)
C3': (-7.002,-42.764,59.316)
C1': (-6.091,-40.585,59.199)
C5': (-9.263,-41.716,59.927)
O4': (-7.467,-40.457,58.910)
C8: (-5.957,-39.087,61.240)
O2': (-4.639,-42.385,59.950)
C6: (-3.954,-36.366,60.343)
C5: (-4.731,-37.512,60.547)
C4: (-4.863,-38.384,59.484)
P: (-9.859,-42.372,62.395)
C4': (-8.103,-41.764,58.963)
C2': (-5.956,-41.881,59.989)
C2: (-3.606,-37.137,58.191)
N1: (-3.390,-36.204,59.128)
N3: (-4.319,-38.258,58.263)
N6: (-3.747,-35.446,61.284)
N7: (-5.426,-37.966,61.651)
N9: (-5.665,-39.397,59.939)
O5': (-8.838,-41.888,61.274)
O3': (-6.466,-43.317,58.115)
OP2: (-9.126,-42.670,63.651)
C3': (-7.002,-42.764,59.316)
C1': (-6.091,-40.585,59.199)
C5': (-9.263,-41.716,59.927)
O4': (-7.467,-40.457,58.910)
C8: (-5.957,-39.087,61.240)
O2': (-4.639,-42.385,59.950)
C6: (-3.954,-36.366,60.343)
C5: (-4.731,-37.512,60.547)
C4: (-4.863,-38.384,59.484)
P: (-9.859,-42.372,62.395)
C4': (-8.103,-41.764,58.963)
C2': (-5.956,-41.881,59.989)
C2: (-3.606,-37.137,58.191)
N1: (-3.390,-36.204,59.128)
N3: (-4.319,-38.258,58.263)
N6: (-3.747,-35.446,61.284)
N7: (-5.426,-37.966,61.651)
N9: (-5.665,-39.397,59.939)
O5': (-8.838,-41.888,61.274)
O3': (-6.466,-43.317,58.115)
Image (generated by PyMOL):