Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X32:X38
Extra
PDB:
ATOM 1 O3' G A 31 126.214 25.055 -5.370 1.00 67.31 O
ATOM 2 P C A 32 125.801 26.166 -4.267 1.00 67.14 P
ATOM 3 OP1 C A 32 126.404 27.475 -4.619 1.00 68.16 O
ATOM 4 OP2 C A 32 126.016 25.617 -2.905 1.00 66.43 O
ATOM 5 O5' C A 32 124.246 26.320 -4.528 1.00 68.69 O
ATOM 6 C5' C A 32 123.778 26.600 -5.841 1.00 69.03 C
ATOM 7 C4' C A 32 122.299 26.369 -5.923 1.00 68.54 C
ATOM 8 O4' C A 32 122.011 24.960 -6.021 1.00 67.86 O
ATOM 9 C3' C A 32 121.523 26.839 -4.712 1.00 69.07 C
ATOM 10 O3' C A 32 121.253 28.221 -4.817 1.00 71.40 O
ATOM 11 C2' C A 32 120.261 25.996 -4.769 1.00 69.03 C
ATOM 12 O2' C A 32 119.287 26.535 -5.638 1.00 69.56 O
ATOM 13 C1' C A 32 120.788 24.691 -5.367 1.00 69.13 C
ATOM 14 N1 C A 32 121.000 23.631 -4.371 1.00 69.88 N
ATOM 15 C2 C A 32 119.889 22.878 -3.947 1.00 70.40 C
ATOM 16 O2 C A 32 118.753 23.158 -4.401 1.00 68.98 O
ATOM 17 N3 C A 32 120.078 21.873 -3.054 1.00 70.33 N
ATOM 18 C4 C A 32 121.302 21.615 -2.589 1.00 70.13 C
ATOM 19 N4 C A 32 121.440 20.597 -1.733 1.00 70.11 N
ATOM 20 C5 C A 32 122.439 22.381 -2.986 1.00 69.83 C
ATOM 21 C6 C A 32 122.245 23.367 -3.870 1.00 69.35 C
ATOM 22 P U A 33 121.368 29.143 -3.513 1.00 73.39 P
ATOM 23 OP1 U A 33 120.985 30.531 -3.909 1.00 72.51 O
ATOM 24 OP2 U A 33 122.699 28.884 -2.884 1.00 74.32 O
ATOM 25 O5' U A 33 120.235 28.563 -2.559 1.00 70.58 O
TER
ATOM 1 O3' A B 37 114.220 13.442 -1.328 1.00 63.64 O
ATOM 2 P A B 38 114.894 13.263 -2.777 1.00 63.02 P
ATOM 3 OP1 A B 38 114.717 11.833 -3.181 1.00 61.96 O
ATOM 4 OP2 A B 38 116.262 13.850 -2.703 1.00 61.41 O
ATOM 5 O5' A B 38 114.041 14.215 -3.740 1.00 63.14 O
ATOM 6 C5' A B 38 112.746 13.830 -4.216 1.00 63.18 C
ATOM 7 C4' A B 38 112.165 14.914 -5.102 1.00 62.84 C
ATOM 8 O4' A B 38 112.096 16.132 -4.320 1.00 62.34 O
ATOM 9 C3' A B 38 112.966 15.301 -6.343 1.00 63.44 C
ATOM 10 O3' A B 38 112.711 14.484 -7.487 1.00 65.24 O
ATOM 11 C2' A B 38 112.534 16.741 -6.567 1.00 62.76 C
ATOM 12 O2' A B 38 111.277 16.853 -7.195 1.00 60.50 O
ATOM 13 C1' A B 38 112.414 17.241 -5.132 1.00 63.98 C
ATOM 14 N9 A B 38 113.692 17.780 -4.672 1.00 67.47 N
ATOM 15 C8 A B 38 114.621 17.210 -3.826 1.00 68.97 C
ATOM 16 N7 A B 38 115.679 17.958 -3.623 1.00 70.49 N
ATOM 17 C5 A B 38 115.432 19.091 -4.385 1.00 71.21 C
ATOM 18 C6 A B 38 116.171 20.258 -4.595 1.00 73.20 C
ATOM 19 N6 A B 38 117.358 20.489 -4.023 1.00 74.72 N
ATOM 20 N1 A B 38 115.644 21.197 -5.418 1.00 73.16 N
ATOM 21 C2 A B 38 114.448 20.962 -5.978 1.00 72.01 C
ATOM 22 N3 A B 38 113.655 19.904 -5.851 1.00 70.79 N
ATOM 23 C4 A B 38 114.213 18.995 -5.033 1.00 69.66 C
ATOM 24 P C B 39 113.927 14.107 -8.489 1.00 67.03 P
ATOM 25 OP1 C B 39 113.412 13.290 -9.615 1.00 67.75 O
ATOM 26 OP2 C B 39 115.056 13.592 -7.669 1.00 67.04 O
ATOM 27 O5' C B 39 114.419 15.500 -9.081 1.00 66.91 O
TER
ATOM 2 P C A 32 125.801 26.166 -4.267 1.00 67.14 P
ATOM 3 OP1 C A 32 126.404 27.475 -4.619 1.00 68.16 O
ATOM 4 OP2 C A 32 126.016 25.617 -2.905 1.00 66.43 O
ATOM 5 O5' C A 32 124.246 26.320 -4.528 1.00 68.69 O
ATOM 6 C5' C A 32 123.778 26.600 -5.841 1.00 69.03 C
ATOM 7 C4' C A 32 122.299 26.369 -5.923 1.00 68.54 C
ATOM 8 O4' C A 32 122.011 24.960 -6.021 1.00 67.86 O
ATOM 9 C3' C A 32 121.523 26.839 -4.712 1.00 69.07 C
ATOM 10 O3' C A 32 121.253 28.221 -4.817 1.00 71.40 O
ATOM 11 C2' C A 32 120.261 25.996 -4.769 1.00 69.03 C
ATOM 12 O2' C A 32 119.287 26.535 -5.638 1.00 69.56 O
ATOM 13 C1' C A 32 120.788 24.691 -5.367 1.00 69.13 C
ATOM 14 N1 C A 32 121.000 23.631 -4.371 1.00 69.88 N
ATOM 15 C2 C A 32 119.889 22.878 -3.947 1.00 70.40 C
ATOM 16 O2 C A 32 118.753 23.158 -4.401 1.00 68.98 O
ATOM 17 N3 C A 32 120.078 21.873 -3.054 1.00 70.33 N
ATOM 18 C4 C A 32 121.302 21.615 -2.589 1.00 70.13 C
ATOM 19 N4 C A 32 121.440 20.597 -1.733 1.00 70.11 N
ATOM 20 C5 C A 32 122.439 22.381 -2.986 1.00 69.83 C
ATOM 21 C6 C A 32 122.245 23.367 -3.870 1.00 69.35 C
ATOM 22 P U A 33 121.368 29.143 -3.513 1.00 73.39 P
ATOM 23 OP1 U A 33 120.985 30.531 -3.909 1.00 72.51 O
ATOM 24 OP2 U A 33 122.699 28.884 -2.884 1.00 74.32 O
ATOM 25 O5' U A 33 120.235 28.563 -2.559 1.00 70.58 O
TER
ATOM 1 O3' A B 37 114.220 13.442 -1.328 1.00 63.64 O
ATOM 2 P A B 38 114.894 13.263 -2.777 1.00 63.02 P
ATOM 3 OP1 A B 38 114.717 11.833 -3.181 1.00 61.96 O
ATOM 4 OP2 A B 38 116.262 13.850 -2.703 1.00 61.41 O
ATOM 5 O5' A B 38 114.041 14.215 -3.740 1.00 63.14 O
ATOM 6 C5' A B 38 112.746 13.830 -4.216 1.00 63.18 C
ATOM 7 C4' A B 38 112.165 14.914 -5.102 1.00 62.84 C
ATOM 8 O4' A B 38 112.096 16.132 -4.320 1.00 62.34 O
ATOM 9 C3' A B 38 112.966 15.301 -6.343 1.00 63.44 C
ATOM 10 O3' A B 38 112.711 14.484 -7.487 1.00 65.24 O
ATOM 11 C2' A B 38 112.534 16.741 -6.567 1.00 62.76 C
ATOM 12 O2' A B 38 111.277 16.853 -7.195 1.00 60.50 O
ATOM 13 C1' A B 38 112.414 17.241 -5.132 1.00 63.98 C
ATOM 14 N9 A B 38 113.692 17.780 -4.672 1.00 67.47 N
ATOM 15 C8 A B 38 114.621 17.210 -3.826 1.00 68.97 C
ATOM 16 N7 A B 38 115.679 17.958 -3.623 1.00 70.49 N
ATOM 17 C5 A B 38 115.432 19.091 -4.385 1.00 71.21 C
ATOM 18 C6 A B 38 116.171 20.258 -4.595 1.00 73.20 C
ATOM 19 N6 A B 38 117.358 20.489 -4.023 1.00 74.72 N
ATOM 20 N1 A B 38 115.644 21.197 -5.418 1.00 73.16 N
ATOM 21 C2 A B 38 114.448 20.962 -5.978 1.00 72.01 C
ATOM 22 N3 A B 38 113.655 19.904 -5.851 1.00 70.79 N
ATOM 23 C4 A B 38 114.213 18.995 -5.033 1.00 69.66 C
ATOM 24 P C B 39 113.927 14.107 -8.489 1.00 67.03 P
ATOM 25 OP1 C B 39 113.412 13.290 -9.615 1.00 67.75 O
ATOM 26 OP2 C B 39 115.056 13.592 -7.669 1.00 67.04 O
ATOM 27 O5' C B 39 114.419 15.500 -9.081 1.00 66.91 O
TER
Atoms:
C2: (119.889,22.878,-3.947)
OP1: (126.404,27.475,-4.619)
OP2: (126.016,25.617,-2.905)
C4: (121.302,21.615,-2.589)
O5': (124.246,26.320,-4.528)
C3': (121.523,26.839,-4.712)
C1': (120.788,24.691,-5.367)
O4': (122.011,24.960,-6.021)
C5': (123.778,26.600,-5.841)
P: (125.801,26.166,-4.267)
O2: (118.753,23.158,-4.401)
C4': (122.299,26.369,-5.923)
C2': (120.261,25.996,-4.769)
O2': (119.287,26.535,-5.638)
N1: (121.000,23.631,-4.371)
N3: (120.078,21.873,-3.054)
N4: (121.440,20.597,-1.733)
C6: (122.245,23.367,-3.870)
C5: (122.439,22.381,-2.986)
O3': (121.253,28.221,-4.817)
OP1: (126.404,27.475,-4.619)
OP2: (126.016,25.617,-2.905)
C4: (121.302,21.615,-2.589)
O5': (124.246,26.320,-4.528)
C3': (121.523,26.839,-4.712)
C1': (120.788,24.691,-5.367)
O4': (122.011,24.960,-6.021)
C5': (123.778,26.600,-5.841)
P: (125.801,26.166,-4.267)
O2: (118.753,23.158,-4.401)
C4': (122.299,26.369,-5.923)
C2': (120.261,25.996,-4.769)
O2': (119.287,26.535,-5.638)
N1: (121.000,23.631,-4.371)
N3: (120.078,21.873,-3.054)
N4: (121.440,20.597,-1.733)
C6: (122.245,23.367,-3.870)
C5: (122.439,22.381,-2.986)
O3': (121.253,28.221,-4.817)
OP1: (114.717,11.833,-3.181)
OP2: (116.262,13.850,-2.703)
C3': (112.966,15.301,-6.343)
C1': (112.414,17.241,-5.132)
C5': (112.746,13.830,-4.216)
O4': (112.096,16.132,-4.320)
C8: (114.621,17.210,-3.826)
O2': (111.277,16.853,-7.195)
C6: (116.171,20.258,-4.595)
C5: (115.432,19.091,-4.385)
C4: (114.213,18.995,-5.033)
P: (114.894,13.263,-2.777)
C4': (112.165,14.914,-5.102)
C2': (112.534,16.741,-6.567)
C2: (114.448,20.962,-5.978)
N1: (115.644,21.197,-5.418)
N3: (113.655,19.904,-5.851)
N6: (117.358,20.489,-4.023)
N7: (115.679,17.958,-3.623)
N9: (113.692,17.780,-4.672)
O5': (114.041,14.215,-3.740)
O3': (112.711,14.484,-7.487)
OP2: (116.262,13.850,-2.703)
C3': (112.966,15.301,-6.343)
C1': (112.414,17.241,-5.132)
C5': (112.746,13.830,-4.216)
O4': (112.096,16.132,-4.320)
C8: (114.621,17.210,-3.826)
O2': (111.277,16.853,-7.195)
C6: (116.171,20.258,-4.595)
C5: (115.432,19.091,-4.385)
C4: (114.213,18.995,-5.033)
P: (114.894,13.263,-2.777)
C4': (112.165,14.914,-5.102)
C2': (112.534,16.741,-6.567)
C2: (114.448,20.962,-5.978)
N1: (115.644,21.197,-5.418)
N3: (113.655,19.904,-5.851)
N6: (117.358,20.489,-4.023)
N7: (115.679,17.958,-3.623)
N9: (113.692,17.780,-4.672)
O5': (114.041,14.215,-3.740)
O3': (112.711,14.484,-7.487)
Image (generated by PyMOL):