ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2O3W:A7:B13

Extra

PDB:
ATOM 1 O3' G A 6 13.775 1.821 0.473 1.00 77.46 O
ATOM 2 P C A 7 13.469 2.755 1.735 1.00 73.73 P
ATOM 3 OP1 C A 7 13.727 1.964 2.962 1.00 73.61 O
ATOM 4 OP2 C A 7 12.135 3.365 1.516 1.00 74.03 O
ATOM 5 O5' C A 7 14.573 3.892 1.603 1.00 72.67 O
ATOM 6 C5' C A 7 15.937 3.549 1.422 1.00 69.38 C
ATOM 7 C4' C A 7 16.734 4.770 1.062 1.00 68.32 C
ATOM 8 O4' C A 7 16.395 5.202 -0.280 1.00 68.39 O
ATOM 9 C3' C A 7 16.482 6.006 1.906 1.00 68.39 C
ATOM 10 O3' C A 7 17.193 5.939 3.131 1.00 68.71 O
ATOM 11 C2' C A 7 17.040 7.092 1.001 1.00 69.39 C
ATOM 12 O2' C A 7 18.456 7.124 1.001 1.00 70.13 O
ATOM 13 C1' C A 7 16.545 6.610 -0.365 1.00 67.86 C
ATOM 14 N1 C A 7 15.243 7.199 -0.683 1.00 65.21 N
ATOM 15 C2 C A 7 15.205 8.524 -1.105 1.00 66.01 C
ATOM 16 O2 C A 7 16.278 9.148 -1.215 1.00 65.73 O
ATOM 17 N3 C A 7 14.008 9.098 -1.381 1.00 64.80 N
ATOM 18 C4 C A 7 12.886 8.392 -1.250 1.00 61.86 C
ATOM 19 N4 C A 7 11.735 9.000 -1.521 1.00 60.55 N
ATOM 20 C5 C A 7 12.899 7.035 -0.832 1.00 62.00 C
ATOM 21 C6 C A 7 14.090 6.481 -0.561 1.00 63.98 C
ATOM 22 P U A 8 16.613 6.685 4.435 1.00 68.25 P
ATOM 23 OP1 U A 8 17.593 6.415 5.508 1.00 69.28 O
ATOM 24 OP2 U A 8 15.182 6.324 4.651 1.00 69.75 O
ATOM 25 O5' U A 8 16.676 8.231 4.057 1.00 68.20 O
TER

ATOM 1 O3' A B 12 6.927 19.040 -3.624 1.00 60.63 O
ATOM 2 P A B 13 7.310 18.724 -5.162 1.00 63.40 P
ATOM 3 OP1 A B 13 7.148 20.004 -5.901 1.00 64.76 O
ATOM 4 OP2 A B 13 6.573 17.523 -5.639 1.00 61.99 O
ATOM 5 O5' A B 13 8.859 18.353 -5.094 1.00 60.11 O
ATOM 6 C5' A B 13 9.804 19.278 -4.593 1.00 59.95 C
ATOM 7 C4' A B 13 11.111 18.584 -4.307 1.00 61.77 C
ATOM 8 O4' A B 13 10.956 17.694 -3.171 1.00 61.41 O
ATOM 9 C3' A B 13 11.655 17.700 -5.418 1.00 62.90 C
ATOM 10 O3' A B 13 12.411 18.466 -6.349 1.00 66.25 O
ATOM 11 C2' A B 13 12.564 16.762 -4.641 1.00 62.14 C
ATOM 12 O2' A B 13 13.793 17.373 -4.313 1.00 62.55 O
ATOM 13 C1' A B 13 11.747 16.533 -3.366 1.00 60.90 C
ATOM 14 N9 A B 13 10.850 15.380 -3.493 1.00 58.49 N
ATOM 15 C8 A B 13 9.551 15.360 -3.941 1.00 56.30 C
ATOM 16 N7 A B 13 9.025 14.164 -3.982 1.00 54.00 N
ATOM 17 C5 A B 13 10.040 13.338 -3.523 1.00 53.30 C
ATOM 18 C6 A B 13 10.114 11.955 -3.331 1.00 51.80 C
ATOM 19 N6 A B 13 9.116 11.123 -3.596 1.00 54.14 N
ATOM 20 N1 A B 13 11.264 11.446 -2.850 1.00 51.11 N
ATOM 21 C2 A B 13 12.272 12.286 -2.584 1.00 54.99 C
ATOM 22 N3 A B 13 12.327 13.608 -2.723 1.00 54.90 N
ATOM 23 C4 A B 13 11.164 14.076 -3.205 1.00 55.40 C
ATOM 24 P A B 14 11.864 18.665 -7.852 1.00 70.40 P
ATOM 25 OP1 A B 14 12.613 19.818 -8.424 1.00 73.28 O
ATOM 26 OP2 A B 14 10.378 18.698 -7.835 1.00 72.32 O
ATOM 27 O5' A B 14 12.305 17.346 -8.620 1.00 64.33 O
TER

Atoms:
C2: (15.205,8.524,-1.105)
OP1: (13.727,1.964,2.962)
OP2: (12.135,3.365,1.516)
C4: (12.886,8.392,-1.250)
O5': (14.573,3.892,1.603)
C3': (16.482,6.006,1.906)
C1': (16.545,6.610,-0.365)
O4': (16.395,5.202,-0.280)
C5': (15.937,3.549,1.422)
P: (13.469,2.755,1.735)
O2: (16.278,9.148,-1.215)
C4': (16.734,4.770,1.062)
C2': (17.040,7.092,1.001)
O2': (18.456,7.124,1.001)
N1: (15.243,7.199,-0.683)
N3: (14.008,9.098,-1.381)
N4: (11.735,9.000,-1.521)
C6: (14.090,6.481,-0.561)
C5: (12.899,7.035,-0.832)
O3': (17.193,5.939,3.131)
OP1: (7.148,20.004,-5.901)
OP2: (6.573,17.523,-5.639)
C3': (11.655,17.700,-5.418)
C1': (11.747,16.533,-3.366)
C5': (9.804,19.278,-4.593)
O4': (10.956,17.694,-3.171)
C8: (9.551,15.360,-3.941)
O2': (13.793,17.373,-4.313)
C6: (10.114,11.955,-3.331)
C5: (10.040,13.338,-3.523)
C4: (11.164,14.076,-3.205)
P: (7.310,18.724,-5.162)
C4': (11.111,18.584,-4.307)
C2': (12.564,16.762,-4.641)
C2: (12.272,12.286,-2.584)
N1: (11.264,11.446,-2.850)
N3: (12.327,13.608,-2.723)
N6: (9.116,11.123,-3.596)
N7: (9.025,14.164,-3.982)
N9: (10.850,15.380,-3.493)
O5': (8.859,18.353,-5.094)
O3': (12.411,18.466,-6.349)
Image (generated by PyMOL):
PyMOL image
show in jmol