Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A30:A429
Extra
PDB:
ATOM 1 O3' G A 29 48.051 124.617 23.100 1.00 55.56 O
ATOM 2 P C A 30 49.577 124.424 22.639 1.00 55.69 P
ATOM 3 OP1 C A 30 49.538 124.642 21.175 1.00 57.38 O
ATOM 4 OP2 C A 30 50.127 123.150 23.180 1.00 53.74 O
ATOM 5 O5' C A 30 50.348 125.664 23.279 1.00 55.73 O
ATOM 6 C5' C A 30 50.058 126.999 22.838 1.00 56.17 C
ATOM 7 C4' C A 30 50.721 128.032 23.724 1.00 55.97 C
ATOM 8 O4' C A 30 50.279 127.890 25.097 1.00 57.72 O
ATOM 9 C3' C A 30 52.229 127.981 23.794 1.00 56.04 C
ATOM 10 O3' C A 30 52.799 128.657 22.678 1.00 53.85 O
ATOM 11 C2' C A 30 52.514 128.662 25.131 1.00 56.70 C
ATOM 12 O2' C A 30 52.432 130.079 25.079 1.00 56.37 O
ATOM 13 C1' C A 30 51.366 128.120 25.985 1.00 57.87 C
ATOM 14 N1 C A 30 51.675 126.832 26.643 1.00 59.84 N
ATOM 15 C2 C A 30 52.402 126.805 27.862 1.00 60.24 C
ATOM 16 O2 C A 30 52.810 127.872 28.357 1.00 59.40 O
ATOM 17 N3 C A 30 52.637 125.603 28.453 1.00 60.79 N
ATOM 18 C4 C A 30 52.192 124.475 27.881 1.00 61.41 C
ATOM 19 N4 C A 30 52.431 123.319 28.497 1.00 62.41 N
ATOM 20 C5 C A 30 51.479 124.481 26.649 1.00 60.66 C
ATOM 21 C6 C A 30 51.246 125.663 26.074 1.00 60.29 C
ATOM 22 P G A 31 54.358 128.476 22.362 1.00 53.11 P
ATOM 23 OP1 G A 31 54.639 129.480 21.314 1.00 52.49 O
ATOM 24 OP2 G A 31 54.658 127.020 22.112 1.00 50.70 O
ATOM 25 O5' G A 31 55.061 128.907 23.726 1.00 52.30 O
TER
ATOM 1 O3' C B 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 2 P A B 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 3 OP1 A B 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 4 OP2 A B 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 5 O5' A B 429 54.758 123.714 38.280 1.00 54.05 O
ATOM 6 C5' A B 429 55.710 124.769 38.522 1.00 55.03 C
ATOM 7 C4' A B 429 55.394 125.950 37.633 1.00 55.24 C
ATOM 8 O4' A B 429 55.388 125.485 36.254 1.00 56.53 O
ATOM 9 C3' A B 429 54.021 126.587 37.851 1.00 55.16 C
ATOM 10 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 11 C2' A B 429 53.135 125.787 36.901 1.00 55.56 C
ATOM 12 O2' A B 429 51.932 126.388 36.473 1.00 53.58 O
ATOM 13 C1' A B 429 54.074 125.565 35.722 1.00 57.50 C
ATOM 14 N9 A B 429 53.767 124.293 35.084 1.00 60.67 N
ATOM 15 C8 A B 429 53.771 123.038 35.653 1.00 60.94 C
ATOM 16 N7 A B 429 53.424 122.084 34.830 1.00 61.68 N
ATOM 17 C5 A B 429 53.169 122.752 33.642 1.00 62.48 C
ATOM 18 C6 A B 429 52.751 122.303 32.399 1.00 62.87 C
ATOM 19 N6 A B 429 52.460 121.027 32.150 1.00 63.66 N
ATOM 20 N1 A B 429 52.630 123.210 31.406 1.00 63.73 N
ATOM 21 C2 A B 429 52.889 124.493 31.671 1.00 63.65 C
ATOM 22 N3 A B 429 53.263 125.052 32.818 1.00 63.37 N
ATOM 23 C4 A B 429 53.392 124.111 33.777 1.00 62.31 C
ATOM 24 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 25 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 26 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 27 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
TER
ATOM 2 P C A 30 49.577 124.424 22.639 1.00 55.69 P
ATOM 3 OP1 C A 30 49.538 124.642 21.175 1.00 57.38 O
ATOM 4 OP2 C A 30 50.127 123.150 23.180 1.00 53.74 O
ATOM 5 O5' C A 30 50.348 125.664 23.279 1.00 55.73 O
ATOM 6 C5' C A 30 50.058 126.999 22.838 1.00 56.17 C
ATOM 7 C4' C A 30 50.721 128.032 23.724 1.00 55.97 C
ATOM 8 O4' C A 30 50.279 127.890 25.097 1.00 57.72 O
ATOM 9 C3' C A 30 52.229 127.981 23.794 1.00 56.04 C
ATOM 10 O3' C A 30 52.799 128.657 22.678 1.00 53.85 O
ATOM 11 C2' C A 30 52.514 128.662 25.131 1.00 56.70 C
ATOM 12 O2' C A 30 52.432 130.079 25.079 1.00 56.37 O
ATOM 13 C1' C A 30 51.366 128.120 25.985 1.00 57.87 C
ATOM 14 N1 C A 30 51.675 126.832 26.643 1.00 59.84 N
ATOM 15 C2 C A 30 52.402 126.805 27.862 1.00 60.24 C
ATOM 16 O2 C A 30 52.810 127.872 28.357 1.00 59.40 O
ATOM 17 N3 C A 30 52.637 125.603 28.453 1.00 60.79 N
ATOM 18 C4 C A 30 52.192 124.475 27.881 1.00 61.41 C
ATOM 19 N4 C A 30 52.431 123.319 28.497 1.00 62.41 N
ATOM 20 C5 C A 30 51.479 124.481 26.649 1.00 60.66 C
ATOM 21 C6 C A 30 51.246 125.663 26.074 1.00 60.29 C
ATOM 22 P G A 31 54.358 128.476 22.362 1.00 53.11 P
ATOM 23 OP1 G A 31 54.639 129.480 21.314 1.00 52.49 O
ATOM 24 OP2 G A 31 54.658 127.020 22.112 1.00 50.70 O
ATOM 25 O5' G A 31 55.061 128.907 23.726 1.00 52.30 O
TER
ATOM 1 O3' C B 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 2 P A B 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 3 OP1 A B 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 4 OP2 A B 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 5 O5' A B 429 54.758 123.714 38.280 1.00 54.05 O
ATOM 6 C5' A B 429 55.710 124.769 38.522 1.00 55.03 C
ATOM 7 C4' A B 429 55.394 125.950 37.633 1.00 55.24 C
ATOM 8 O4' A B 429 55.388 125.485 36.254 1.00 56.53 O
ATOM 9 C3' A B 429 54.021 126.587 37.851 1.00 55.16 C
ATOM 10 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 11 C2' A B 429 53.135 125.787 36.901 1.00 55.56 C
ATOM 12 O2' A B 429 51.932 126.388 36.473 1.00 53.58 O
ATOM 13 C1' A B 429 54.074 125.565 35.722 1.00 57.50 C
ATOM 14 N9 A B 429 53.767 124.293 35.084 1.00 60.67 N
ATOM 15 C8 A B 429 53.771 123.038 35.653 1.00 60.94 C
ATOM 16 N7 A B 429 53.424 122.084 34.830 1.00 61.68 N
ATOM 17 C5 A B 429 53.169 122.752 33.642 1.00 62.48 C
ATOM 18 C6 A B 429 52.751 122.303 32.399 1.00 62.87 C
ATOM 19 N6 A B 429 52.460 121.027 32.150 1.00 63.66 N
ATOM 20 N1 A B 429 52.630 123.210 31.406 1.00 63.73 N
ATOM 21 C2 A B 429 52.889 124.493 31.671 1.00 63.65 C
ATOM 22 N3 A B 429 53.263 125.052 32.818 1.00 63.37 N
ATOM 23 C4 A B 429 53.392 124.111 33.777 1.00 62.31 C
ATOM 24 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 25 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 26 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 27 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
TER
Atoms:
C2: (52.402,126.805,27.862)
OP1: (49.538,124.642,21.175)
OP2: (50.127,123.150,23.180)
C4: (52.192,124.475,27.881)
O5': (50.348,125.664,23.279)
C3': (52.229,127.981,23.794)
C1': (51.366,128.120,25.985)
O4': (50.279,127.890,25.097)
C5': (50.058,126.999,22.838)
P: (49.577,124.424,22.639)
O2: (52.810,127.872,28.357)
C4': (50.721,128.032,23.724)
C2': (52.514,128.662,25.131)
O2': (52.432,130.079,25.079)
N1: (51.675,126.832,26.643)
N3: (52.637,125.603,28.453)
N4: (52.431,123.319,28.497)
C6: (51.246,125.663,26.074)
C5: (51.479,124.481,26.649)
O3': (52.799,128.657,22.678)
OP1: (49.538,124.642,21.175)
OP2: (50.127,123.150,23.180)
C4: (52.192,124.475,27.881)
O5': (50.348,125.664,23.279)
C3': (52.229,127.981,23.794)
C1': (51.366,128.120,25.985)
O4': (50.279,127.890,25.097)
C5': (50.058,126.999,22.838)
P: (49.577,124.424,22.639)
O2: (52.810,127.872,28.357)
C4': (50.721,128.032,23.724)
C2': (52.514,128.662,25.131)
O2': (52.432,130.079,25.079)
N1: (51.675,126.832,26.643)
N3: (52.637,125.603,28.453)
N4: (52.431,123.319,28.497)
C6: (51.246,125.663,26.074)
C5: (51.479,124.481,26.649)
O3': (52.799,128.657,22.678)
OP1: (55.016,122.498,40.419)
OP2: (53.844,121.395,38.424)
C3': (54.021,126.587,37.851)
C1': (54.074,125.565,35.722)
C5': (55.710,124.769,38.522)
O4': (55.388,125.485,36.254)
C8: (53.771,123.038,35.653)
O2': (51.932,126.388,36.473)
C6: (52.751,122.303,32.399)
C5: (53.169,122.752,33.642)
C4: (53.392,124.111,33.777)
P: (54.913,122.283,38.956)
C4': (55.394,125.950,37.633)
C2': (53.135,125.787,36.901)
C2: (52.889,124.493,31.671)
N1: (52.630,123.210,31.406)
N3: (53.263,125.052,32.818)
N6: (52.460,121.027,32.150)
N7: (53.424,122.084,34.830)
N9: (53.767,124.293,35.084)
O5': (54.758,123.714,38.280)
O3': (54.061,127.960,37.484)
OP2: (53.844,121.395,38.424)
C3': (54.021,126.587,37.851)
C1': (54.074,125.565,35.722)
C5': (55.710,124.769,38.522)
O4': (55.388,125.485,36.254)
C8: (53.771,123.038,35.653)
O2': (51.932,126.388,36.473)
C6: (52.751,122.303,32.399)
C5: (53.169,122.752,33.642)
C4: (53.392,124.111,33.777)
P: (54.913,122.283,38.956)
C4': (55.394,125.950,37.633)
C2': (53.135,125.787,36.901)
C2: (52.889,124.493,31.671)
N1: (52.630,123.210,31.406)
N3: (53.263,125.052,32.818)
N6: (52.460,121.027,32.150)
N7: (53.424,122.084,34.830)
N9: (53.767,124.293,35.084)
O5': (54.758,123.714,38.280)
O3': (54.061,127.960,37.484)
Image (generated by PyMOL):