Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02050:02326
Extra
PDB:
ATOM 1 O3' A A2049 72.412 119.490 88.336 1.00 68.86 O
ATOM 2 P C A2050 72.687 118.189 89.226 1.00 68.52 P
ATOM 3 OP1 C A2050 74.127 117.864 89.001 1.00 69.52 O
ATOM 4 OP2 C A2050 71.645 117.180 88.893 1.00 67.86 O
ATOM 5 O5' C A2050 72.457 118.673 90.733 1.00 63.69 O
ATOM 6 C5' C A2050 73.565 118.937 91.624 1.00 55.69 C
ATOM 7 C4' C A2050 73.358 118.222 92.947 1.00 49.74 C
ATOM 8 O4' C A2050 72.146 118.699 93.582 1.00 48.68 O
ATOM 9 C3' C A2050 73.184 116.718 92.851 1.00 45.20 C
ATOM 10 O3' C A2050 74.457 116.099 92.877 1.00 45.00 O
ATOM 11 C2' C A2050 72.387 116.387 94.106 1.00 45.15 C
ATOM 12 O2' C A2050 73.184 116.293 95.259 1.00 42.13 O
ATOM 13 C1' C A2050 71.503 117.626 94.248 1.00 46.07 C
ATOM 14 N1 C A2050 70.135 117.478 93.708 1.00 45.29 N
ATOM 15 C2 C A2050 69.171 116.830 94.487 1.00 43.30 C
ATOM 16 O2 C A2050 69.491 116.396 95.597 1.00 44.89 O
ATOM 17 N3 C A2050 67.919 116.697 94.012 1.00 42.28 N
ATOM 18 C4 C A2050 67.607 117.182 92.809 1.00 42.70 C
ATOM 19 N4 C A2050 66.356 117.031 92.380 1.00 41.77 N
ATOM 20 C5 C A2050 68.566 117.845 91.992 1.00 42.89 C
ATOM 21 C6 C A2050 69.806 117.969 92.473 1.00 44.10 C
ATOM 22 P C A2051 74.750 114.828 91.945 1.00 45.05 P
ATOM 23 OP1 C A2051 76.066 114.265 92.334 1.00 46.46 O
ATOM 24 OP2 C A2051 74.535 115.232 90.544 1.00 44.27 O
ATOM 25 O5' C A2051 73.614 113.799 92.380 1.00 44.28 O
TER
ATOM 1 O3' U B2325 64.693 106.733 96.679 1.00 39.11 O
ATOM 2 P A B2326 64.356 106.854 98.238 1.00 40.99 P
ATOM 3 OP1 A B2326 64.136 105.485 98.777 1.00 39.51 O
ATOM 4 OP2 A B2326 63.306 107.880 98.411 1.00 40.28 O
ATOM 5 O5' A B2326 65.726 107.399 98.834 1.00 41.13 O
ATOM 6 C5' A B2326 66.888 106.552 98.886 1.00 38.49 C
ATOM 7 C4' A B2326 68.148 107.359 98.692 1.00 38.82 C
ATOM 8 O4' A B2326 68.221 107.864 97.335 1.00 39.68 O
ATOM 9 C3' A B2326 68.316 108.615 99.529 1.00 39.79 C
ATOM 10 O3' A B2326 68.698 108.336 100.861 1.00 40.03 O
ATOM 11 C2' A B2326 69.411 109.336 98.757 1.00 40.19 C
ATOM 12 O2' A B2326 70.691 108.754 98.941 1.00 39.77 O
ATOM 13 C1' A B2326 68.961 109.076 97.323 1.00 38.82 C
ATOM 14 N9 A B2326 68.097 110.145 96.835 1.00 38.22 N
ATOM 15 C8 A B2326 66.766 110.102 96.513 1.00 40.13 C
ATOM 16 N7 A B2326 66.289 111.243 96.077 1.00 39.77 N
ATOM 17 C5 A B2326 67.380 112.097 96.127 1.00 39.55 C
ATOM 18 C6 A B2326 67.539 113.447 95.793 1.00 39.00 C
ATOM 19 N6 A B2326 66.562 114.215 95.326 1.00 38.58 N
ATOM 20 N1 A B2326 68.759 113.992 95.956 1.00 41.72 N
ATOM 21 C2 A B2326 69.747 113.228 96.420 1.00 40.64 C
ATOM 22 N3 A B2326 69.724 111.949 96.767 1.00 41.58 N
ATOM 23 C4 A B2326 68.497 111.435 96.595 1.00 40.01 C
ATOM 24 P A B2327 68.352 109.388 102.025 1.00 43.80 P
ATOM 25 OP1 A B2327 68.893 108.799 103.293 1.00 41.67 O
ATOM 26 OP2 A B2327 66.915 109.743 101.936 1.00 40.34 O
ATOM 27 O5' A B2327 69.204 110.688 101.648 1.00 43.00 O
TER
ATOM 2 P C A2050 72.687 118.189 89.226 1.00 68.52 P
ATOM 3 OP1 C A2050 74.127 117.864 89.001 1.00 69.52 O
ATOM 4 OP2 C A2050 71.645 117.180 88.893 1.00 67.86 O
ATOM 5 O5' C A2050 72.457 118.673 90.733 1.00 63.69 O
ATOM 6 C5' C A2050 73.565 118.937 91.624 1.00 55.69 C
ATOM 7 C4' C A2050 73.358 118.222 92.947 1.00 49.74 C
ATOM 8 O4' C A2050 72.146 118.699 93.582 1.00 48.68 O
ATOM 9 C3' C A2050 73.184 116.718 92.851 1.00 45.20 C
ATOM 10 O3' C A2050 74.457 116.099 92.877 1.00 45.00 O
ATOM 11 C2' C A2050 72.387 116.387 94.106 1.00 45.15 C
ATOM 12 O2' C A2050 73.184 116.293 95.259 1.00 42.13 O
ATOM 13 C1' C A2050 71.503 117.626 94.248 1.00 46.07 C
ATOM 14 N1 C A2050 70.135 117.478 93.708 1.00 45.29 N
ATOM 15 C2 C A2050 69.171 116.830 94.487 1.00 43.30 C
ATOM 16 O2 C A2050 69.491 116.396 95.597 1.00 44.89 O
ATOM 17 N3 C A2050 67.919 116.697 94.012 1.00 42.28 N
ATOM 18 C4 C A2050 67.607 117.182 92.809 1.00 42.70 C
ATOM 19 N4 C A2050 66.356 117.031 92.380 1.00 41.77 N
ATOM 20 C5 C A2050 68.566 117.845 91.992 1.00 42.89 C
ATOM 21 C6 C A2050 69.806 117.969 92.473 1.00 44.10 C
ATOM 22 P C A2051 74.750 114.828 91.945 1.00 45.05 P
ATOM 23 OP1 C A2051 76.066 114.265 92.334 1.00 46.46 O
ATOM 24 OP2 C A2051 74.535 115.232 90.544 1.00 44.27 O
ATOM 25 O5' C A2051 73.614 113.799 92.380 1.00 44.28 O
TER
ATOM 1 O3' U B2325 64.693 106.733 96.679 1.00 39.11 O
ATOM 2 P A B2326 64.356 106.854 98.238 1.00 40.99 P
ATOM 3 OP1 A B2326 64.136 105.485 98.777 1.00 39.51 O
ATOM 4 OP2 A B2326 63.306 107.880 98.411 1.00 40.28 O
ATOM 5 O5' A B2326 65.726 107.399 98.834 1.00 41.13 O
ATOM 6 C5' A B2326 66.888 106.552 98.886 1.00 38.49 C
ATOM 7 C4' A B2326 68.148 107.359 98.692 1.00 38.82 C
ATOM 8 O4' A B2326 68.221 107.864 97.335 1.00 39.68 O
ATOM 9 C3' A B2326 68.316 108.615 99.529 1.00 39.79 C
ATOM 10 O3' A B2326 68.698 108.336 100.861 1.00 40.03 O
ATOM 11 C2' A B2326 69.411 109.336 98.757 1.00 40.19 C
ATOM 12 O2' A B2326 70.691 108.754 98.941 1.00 39.77 O
ATOM 13 C1' A B2326 68.961 109.076 97.323 1.00 38.82 C
ATOM 14 N9 A B2326 68.097 110.145 96.835 1.00 38.22 N
ATOM 15 C8 A B2326 66.766 110.102 96.513 1.00 40.13 C
ATOM 16 N7 A B2326 66.289 111.243 96.077 1.00 39.77 N
ATOM 17 C5 A B2326 67.380 112.097 96.127 1.00 39.55 C
ATOM 18 C6 A B2326 67.539 113.447 95.793 1.00 39.00 C
ATOM 19 N6 A B2326 66.562 114.215 95.326 1.00 38.58 N
ATOM 20 N1 A B2326 68.759 113.992 95.956 1.00 41.72 N
ATOM 21 C2 A B2326 69.747 113.228 96.420 1.00 40.64 C
ATOM 22 N3 A B2326 69.724 111.949 96.767 1.00 41.58 N
ATOM 23 C4 A B2326 68.497 111.435 96.595 1.00 40.01 C
ATOM 24 P A B2327 68.352 109.388 102.025 1.00 43.80 P
ATOM 25 OP1 A B2327 68.893 108.799 103.293 1.00 41.67 O
ATOM 26 OP2 A B2327 66.915 109.743 101.936 1.00 40.34 O
ATOM 27 O5' A B2327 69.204 110.688 101.648 1.00 43.00 O
TER
Atoms:
C2: (69.171,116.830,94.487)
OP1: (74.127,117.864,89.001)
OP2: (71.645,117.180,88.893)
C4: (67.607,117.182,92.809)
O5': (72.457,118.673,90.733)
C3': (73.184,116.718,92.851)
C1': (71.503,117.626,94.248)
O4': (72.146,118.699,93.582)
C5': (73.565,118.937,91.624)
P: (72.687,118.189,89.226)
O2: (69.491,116.396,95.597)
C4': (73.358,118.222,92.947)
C2': (72.387,116.387,94.106)
O2': (73.184,116.293,95.259)
N1: (70.135,117.478,93.708)
N3: (67.919,116.697,94.012)
N4: (66.356,117.031,92.380)
C6: (69.806,117.969,92.473)
C5: (68.566,117.845,91.992)
O3': (74.457,116.099,92.877)
OP1: (74.127,117.864,89.001)
OP2: (71.645,117.180,88.893)
C4: (67.607,117.182,92.809)
O5': (72.457,118.673,90.733)
C3': (73.184,116.718,92.851)
C1': (71.503,117.626,94.248)
O4': (72.146,118.699,93.582)
C5': (73.565,118.937,91.624)
P: (72.687,118.189,89.226)
O2: (69.491,116.396,95.597)
C4': (73.358,118.222,92.947)
C2': (72.387,116.387,94.106)
O2': (73.184,116.293,95.259)
N1: (70.135,117.478,93.708)
N3: (67.919,116.697,94.012)
N4: (66.356,117.031,92.380)
C6: (69.806,117.969,92.473)
C5: (68.566,117.845,91.992)
O3': (74.457,116.099,92.877)
OP1: (64.136,105.485,98.777)
OP2: (63.306,107.880,98.411)
C3': (68.316,108.615,99.529)
C1': (68.961,109.076,97.323)
C5': (66.888,106.552,98.886)
O4': (68.221,107.864,97.335)
C8: (66.766,110.102,96.513)
O2': (70.691,108.754,98.941)
C6: (67.539,113.447,95.793)
C5: (67.380,112.097,96.127)
C4: (68.497,111.435,96.595)
P: (64.356,106.854,98.238)
C4': (68.148,107.359,98.692)
C2': (69.411,109.336,98.757)
C2: (69.747,113.228,96.420)
N1: (68.759,113.992,95.956)
N3: (69.724,111.949,96.767)
N6: (66.562,114.215,95.326)
N7: (66.289,111.243,96.077)
N9: (68.097,110.145,96.835)
O5': (65.726,107.399,98.834)
O3': (68.698,108.336,100.861)
OP2: (63.306,107.880,98.411)
C3': (68.316,108.615,99.529)
C1': (68.961,109.076,97.323)
C5': (66.888,106.552,98.886)
O4': (68.221,107.864,97.335)
C8: (66.766,110.102,96.513)
O2': (70.691,108.754,98.941)
C6: (67.539,113.447,95.793)
C5: (67.380,112.097,96.127)
C4: (68.497,111.435,96.595)
P: (64.356,106.854,98.238)
C4': (68.148,107.359,98.692)
C2': (69.411,109.336,98.757)
C2: (69.747,113.228,96.420)
N1: (68.759,113.992,95.956)
N3: (69.724,111.949,96.767)
N6: (66.562,114.215,95.326)
N7: (66.289,111.243,96.077)
N9: (68.097,110.145,96.835)
O5': (65.726,107.399,98.834)
O3': (68.698,108.336,100.861)
Image (generated by PyMOL):