Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:B112:B65
Extra
PDB:
ATOM 1 O3' U A 111 49.618 33.933 113.532 1.00 49.83 O
ATOM 2 P C A 112 50.042 32.430 113.879 1.00 50.29 P
ATOM 3 OP1 C A 112 49.978 31.650 112.616 1.00 49.32 O
ATOM 4 OP2 C A 112 49.224 32.023 115.037 1.00 50.13 O
ATOM 5 O5' C A 112 51.560 32.528 114.356 1.00 48.66 O
ATOM 6 C5' C A 112 52.577 33.022 113.479 1.00 47.17 C
ATOM 7 C4' C A 112 53.843 32.212 113.623 1.00 47.11 C
ATOM 8 O4' C A 112 54.588 32.647 114.795 1.00 47.56 O
ATOM 9 C3' C A 112 53.662 30.702 113.756 1.00 47.14 C
ATOM 10 O3' C A 112 54.600 30.037 112.921 1.00 47.82 O
ATOM 11 C2' C A 112 53.977 30.457 115.234 1.00 48.31 C
ATOM 12 O2' C A 112 54.509 29.176 115.492 1.00 49.06 O
ATOM 13 C1' C A 112 55.046 31.513 115.484 1.00 48.23 C
ATOM 14 N1 C A 112 55.379 31.873 116.885 1.00 50.24 N
ATOM 15 C2 C A 112 56.656 32.423 117.146 1.00 51.68 C
ATOM 16 O2 C A 112 57.433 32.625 116.199 1.00 52.21 O
ATOM 17 N3 C A 112 57.007 32.714 118.423 1.00 52.00 N
ATOM 18 C4 C A 112 56.153 32.476 119.423 1.00 52.29 C
ATOM 19 N4 C A 112 56.565 32.754 120.666 1.00 53.12 N
ATOM 20 C5 C A 112 54.846 31.939 119.192 1.00 51.42 C
ATOM 21 C6 C A 112 54.500 31.663 117.918 1.00 50.95 C
ATOM 22 P G A 113 54.086 29.238 111.619 1.00 47.68 P
ATOM 23 OP1 G A 113 53.095 28.234 112.056 1.00 47.71 O
ATOM 24 OP2 G A 113 55.257 28.819 110.799 1.00 45.69 O
ATOM 25 O5' G A 113 53.285 30.336 110.807 1.00 47.31 O
TER
ATOM 1 O3' A B 64 54.899 35.461 126.174 1.00 71.07 O
ATOM 2 P G B 65 55.413 36.939 126.591 1.00 69.48 P
ATOM 3 OP1 G B 65 55.164 37.047 128.051 1.00 69.72 O
ATOM 4 OP2 G B 65 54.860 37.984 125.684 1.00 70.35 O
ATOM 5 O5' G B 65 56.994 36.868 126.391 1.00 67.25 O
ATOM 6 C5' G B 65 57.884 37.381 127.404 1.00 64.97 C
ATOM 7 C4' G B 65 59.274 37.589 126.847 1.00 63.08 C
ATOM 8 O4' G B 65 59.836 36.310 126.453 1.00 63.08 O
ATOM 9 C3' G B 65 59.399 38.449 125.599 1.00 61.73 C
ATOM 10 O3' G B 65 59.371 39.840 125.899 1.00 61.41 O
ATOM 11 C2' G B 65 60.739 37.992 125.036 1.00 60.62 C
ATOM 12 O2' G B 65 61.850 38.543 125.713 1.00 58.66 O
ATOM 13 C1' G B 65 60.677 36.488 125.317 1.00 61.39 C
ATOM 14 N9 G B 65 60.097 35.750 124.198 1.00 60.14 N
ATOM 15 C8 G B 65 58.923 35.039 124.190 1.00 60.21 C
ATOM 16 N7 G B 65 58.656 34.505 123.031 1.00 59.64 N
ATOM 17 C5 G B 65 59.717 34.886 122.224 1.00 58.72 C
ATOM 18 C6 G B 65 59.974 34.615 120.859 1.00 57.74 C
ATOM 19 O6 G B 65 59.287 33.976 120.060 1.00 55.80 O
ATOM 20 N1 G B 65 61.172 35.182 120.444 1.00 58.03 N
ATOM 21 C2 G B 65 62.017 35.919 121.239 1.00 58.70 C
ATOM 22 N2 G B 65 63.147 36.363 120.663 1.00 58.86 N
ATOM 23 N3 G B 65 61.778 36.194 122.509 1.00 59.51 N
ATOM 24 C4 G B 65 60.621 35.647 122.933 1.00 59.21 C
ATOM 25 P C B 66 58.690 40.874 124.860 1.00 61.40 P
ATOM 26 OP1 C B 66 58.614 42.186 125.555 1.00 60.02 O
ATOM 27 OP2 C B 66 57.459 40.284 124.264 1.00 59.56 O
ATOM 28 O5' C B 66 59.775 40.993 123.706 1.00 59.22 O
TER
ATOM 2 P C A 112 50.042 32.430 113.879 1.00 50.29 P
ATOM 3 OP1 C A 112 49.978 31.650 112.616 1.00 49.32 O
ATOM 4 OP2 C A 112 49.224 32.023 115.037 1.00 50.13 O
ATOM 5 O5' C A 112 51.560 32.528 114.356 1.00 48.66 O
ATOM 6 C5' C A 112 52.577 33.022 113.479 1.00 47.17 C
ATOM 7 C4' C A 112 53.843 32.212 113.623 1.00 47.11 C
ATOM 8 O4' C A 112 54.588 32.647 114.795 1.00 47.56 O
ATOM 9 C3' C A 112 53.662 30.702 113.756 1.00 47.14 C
ATOM 10 O3' C A 112 54.600 30.037 112.921 1.00 47.82 O
ATOM 11 C2' C A 112 53.977 30.457 115.234 1.00 48.31 C
ATOM 12 O2' C A 112 54.509 29.176 115.492 1.00 49.06 O
ATOM 13 C1' C A 112 55.046 31.513 115.484 1.00 48.23 C
ATOM 14 N1 C A 112 55.379 31.873 116.885 1.00 50.24 N
ATOM 15 C2 C A 112 56.656 32.423 117.146 1.00 51.68 C
ATOM 16 O2 C A 112 57.433 32.625 116.199 1.00 52.21 O
ATOM 17 N3 C A 112 57.007 32.714 118.423 1.00 52.00 N
ATOM 18 C4 C A 112 56.153 32.476 119.423 1.00 52.29 C
ATOM 19 N4 C A 112 56.565 32.754 120.666 1.00 53.12 N
ATOM 20 C5 C A 112 54.846 31.939 119.192 1.00 51.42 C
ATOM 21 C6 C A 112 54.500 31.663 117.918 1.00 50.95 C
ATOM 22 P G A 113 54.086 29.238 111.619 1.00 47.68 P
ATOM 23 OP1 G A 113 53.095 28.234 112.056 1.00 47.71 O
ATOM 24 OP2 G A 113 55.257 28.819 110.799 1.00 45.69 O
ATOM 25 O5' G A 113 53.285 30.336 110.807 1.00 47.31 O
TER
ATOM 1 O3' A B 64 54.899 35.461 126.174 1.00 71.07 O
ATOM 2 P G B 65 55.413 36.939 126.591 1.00 69.48 P
ATOM 3 OP1 G B 65 55.164 37.047 128.051 1.00 69.72 O
ATOM 4 OP2 G B 65 54.860 37.984 125.684 1.00 70.35 O
ATOM 5 O5' G B 65 56.994 36.868 126.391 1.00 67.25 O
ATOM 6 C5' G B 65 57.884 37.381 127.404 1.00 64.97 C
ATOM 7 C4' G B 65 59.274 37.589 126.847 1.00 63.08 C
ATOM 8 O4' G B 65 59.836 36.310 126.453 1.00 63.08 O
ATOM 9 C3' G B 65 59.399 38.449 125.599 1.00 61.73 C
ATOM 10 O3' G B 65 59.371 39.840 125.899 1.00 61.41 O
ATOM 11 C2' G B 65 60.739 37.992 125.036 1.00 60.62 C
ATOM 12 O2' G B 65 61.850 38.543 125.713 1.00 58.66 O
ATOM 13 C1' G B 65 60.677 36.488 125.317 1.00 61.39 C
ATOM 14 N9 G B 65 60.097 35.750 124.198 1.00 60.14 N
ATOM 15 C8 G B 65 58.923 35.039 124.190 1.00 60.21 C
ATOM 16 N7 G B 65 58.656 34.505 123.031 1.00 59.64 N
ATOM 17 C5 G B 65 59.717 34.886 122.224 1.00 58.72 C
ATOM 18 C6 G B 65 59.974 34.615 120.859 1.00 57.74 C
ATOM 19 O6 G B 65 59.287 33.976 120.060 1.00 55.80 O
ATOM 20 N1 G B 65 61.172 35.182 120.444 1.00 58.03 N
ATOM 21 C2 G B 65 62.017 35.919 121.239 1.00 58.70 C
ATOM 22 N2 G B 65 63.147 36.363 120.663 1.00 58.86 N
ATOM 23 N3 G B 65 61.778 36.194 122.509 1.00 59.51 N
ATOM 24 C4 G B 65 60.621 35.647 122.933 1.00 59.21 C
ATOM 25 P C B 66 58.690 40.874 124.860 1.00 61.40 P
ATOM 26 OP1 C B 66 58.614 42.186 125.555 1.00 60.02 O
ATOM 27 OP2 C B 66 57.459 40.284 124.264 1.00 59.56 O
ATOM 28 O5' C B 66 59.775 40.993 123.706 1.00 59.22 O
TER
Atoms:
C2: (56.656,32.423,117.146)
OP1: (49.978,31.650,112.616)
OP2: (49.224,32.023,115.037)
C4: (56.153,32.476,119.423)
O5': (51.560,32.528,114.356)
C3': (53.662,30.702,113.756)
C1': (55.046,31.513,115.484)
O4': (54.588,32.647,114.795)
C5': (52.577,33.022,113.479)
P: (50.042,32.430,113.879)
O2: (57.433,32.625,116.199)
C4': (53.843,32.212,113.623)
C2': (53.977,30.457,115.234)
O2': (54.509,29.176,115.492)
N1: (55.379,31.873,116.885)
N3: (57.007,32.714,118.423)
N4: (56.565,32.754,120.666)
C6: (54.500,31.663,117.918)
C5: (54.846,31.939,119.192)
O3': (54.600,30.037,112.921)
OP1: (49.978,31.650,112.616)
OP2: (49.224,32.023,115.037)
C4: (56.153,32.476,119.423)
O5': (51.560,32.528,114.356)
C3': (53.662,30.702,113.756)
C1': (55.046,31.513,115.484)
O4': (54.588,32.647,114.795)
C5': (52.577,33.022,113.479)
P: (50.042,32.430,113.879)
O2: (57.433,32.625,116.199)
C4': (53.843,32.212,113.623)
C2': (53.977,30.457,115.234)
O2': (54.509,29.176,115.492)
N1: (55.379,31.873,116.885)
N3: (57.007,32.714,118.423)
N4: (56.565,32.754,120.666)
C6: (54.500,31.663,117.918)
C5: (54.846,31.939,119.192)
O3': (54.600,30.037,112.921)
OP1: (55.164,37.047,128.051)
OP2: (54.860,37.984,125.684)
C3': (59.399,38.449,125.599)
C1': (60.677,36.488,125.317)
C5': (57.884,37.381,127.404)
O6: (59.287,33.976,120.060)
O4': (59.836,36.310,126.453)
C8: (58.923,35.039,124.190)
C2: (62.017,35.919,121.239)
C6: (59.974,34.615,120.859)
C5: (59.717,34.886,122.224)
C4: (60.621,35.647,122.933)
P: (55.413,36.939,126.591)
C4': (59.274,37.589,126.847)
C2': (60.739,37.992,125.036)
O2': (61.850,38.543,125.713)
N1: (61.172,35.182,120.444)
N2: (63.147,36.363,120.663)
N3: (61.778,36.194,122.509)
N7: (58.656,34.505,123.031)
N9: (60.097,35.750,124.198)
O5': (56.994,36.868,126.391)
O3': (59.371,39.840,125.899)
OP2: (54.860,37.984,125.684)
C3': (59.399,38.449,125.599)
C1': (60.677,36.488,125.317)
C5': (57.884,37.381,127.404)
O6: (59.287,33.976,120.060)
O4': (59.836,36.310,126.453)
C8: (58.923,35.039,124.190)
C2: (62.017,35.919,121.239)
C6: (59.974,34.615,120.859)
C5: (59.717,34.886,122.224)
C4: (60.621,35.647,122.933)
P: (55.413,36.939,126.591)
C4': (59.274,37.589,126.847)
C2': (60.739,37.992,125.036)
O2': (61.850,38.543,125.713)
N1: (61.172,35.182,120.444)
N2: (63.147,36.363,120.663)
N3: (61.778,36.194,122.509)
N7: (58.656,34.505,123.031)
N9: (60.097,35.750,124.198)
O5': (56.994,36.868,126.391)
O3': (59.371,39.840,125.899)
Image (generated by PyMOL):