ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1SJF:B42:B62

Extra

PDB:
ATOM 1 O3' G A 41 46.767 68.740 75.988 1.00 96.54 O
ATOM 2 P C A 42 47.392 67.442 75.285 1.00 96.38 P
ATOM 3 OP1 C A 42 47.957 66.565 76.343 1.00 97.17 O
ATOM 4 OP2 C A 42 48.258 67.912 74.163 1.00 95.65 O
ATOM 5 O5' C A 42 46.133 66.710 74.652 1.00 94.47 O
ATOM 6 C5' C A 42 45.431 65.726 75.387 1.00 91.37 C
ATOM 7 C4' C A 42 44.468 66.392 76.320 1.00 89.28 C
ATOM 8 O4' C A 42 43.728 67.399 75.585 1.00 88.30 O
ATOM 9 C3' C A 42 43.446 65.459 76.949 1.00 88.75 C
ATOM 10 O3' C A 42 43.196 65.896 78.273 1.00 88.70 O
ATOM 11 C2' C A 42 42.206 65.682 76.087 1.00 87.63 C
ATOM 12 O2' C A 42 40.996 65.467 76.781 1.00 89.30 O
ATOM 13 C1' C A 42 42.346 67.155 75.714 1.00 85.89 C
ATOM 14 N1 C A 42 41.693 67.495 74.446 1.00 82.40 N
ATOM 15 C2 C A 42 40.334 67.820 74.457 1.00 80.98 C
ATOM 16 O2 C A 42 39.729 67.829 75.542 1.00 79.65 O
ATOM 17 N3 C A 42 39.714 68.116 73.292 1.00 80.00 N
ATOM 18 C4 C A 42 40.402 68.100 72.149 1.00 79.38 C
ATOM 19 N4 C A 42 39.746 68.393 71.022 1.00 77.81 N
ATOM 20 C5 C A 42 41.793 67.781 72.111 1.00 79.41 C
ATOM 21 C6 C A 42 42.392 67.488 73.271 1.00 80.70 C
ATOM 22 P A A 43 43.715 65.023 79.519 1.00 89.19 P
ATOM 23 OP1 A A 43 45.170 65.279 79.688 1.00 88.31 O
ATOM 24 OP2 A A 43 43.222 63.627 79.352 1.00 88.67 O
ATOM 25 O5' A A 43 42.924 65.657 80.746 1.00 87.62 O
TER

ATOM 1 O3' U B 61 38.605 68.390 64.747 1.00 69.72 O
ATOM 2 P G B 62 38.681 69.922 65.263 1.00 71.15 P
ATOM 3 OP1 G B 62 38.655 70.774 64.039 1.00 71.67 O
ATOM 4 OP2 G B 62 39.801 70.071 66.236 1.00 71.17 O
ATOM 5 O5' G B 62 37.308 70.152 66.042 1.00 68.22 O
ATOM 6 C5' G B 62 36.073 70.114 65.339 1.00 66.21 C
ATOM 7 C4' G B 62 34.916 70.340 66.282 1.00 65.63 C
ATOM 8 O4' G B 62 34.862 69.285 67.271 1.00 65.91 O
ATOM 9 C3' G B 62 34.938 71.622 67.090 1.00 64.75 C
ATOM 10 O3' G B 62 34.411 72.692 66.324 1.00 65.29 O
ATOM 11 C2' G B 62 34.050 71.281 68.281 1.00 64.05 C
ATOM 12 O2' G B 62 32.673 71.403 67.986 1.00 61.07 O
ATOM 13 C1' G B 62 34.361 69.799 68.489 1.00 63.93 C
ATOM 14 N9 G B 62 35.338 69.521 69.536 1.00 62.12 N
ATOM 15 C8 G B 62 36.663 69.214 69.365 1.00 62.32 C
ATOM 16 N7 G B 62 37.278 68.958 70.491 1.00 62.43 N
ATOM 17 C5 G B 62 36.302 69.120 71.464 1.00 61.10 C
ATOM 18 C6 G B 62 36.378 68.971 72.866 1.00 60.30 C
ATOM 19 O6 G B 62 37.349 68.652 73.548 1.00 60.60 O
ATOM 20 N1 G B 62 35.158 69.233 73.478 1.00 59.95 N
ATOM 21 C2 G B 62 34.006 69.590 72.820 1.00 60.96 C
ATOM 22 N2 G B 62 32.925 69.802 73.585 1.00 59.35 N
ATOM 23 N3 G B 62 33.920 69.729 71.504 1.00 61.83 N
ATOM 24 C4 G B 62 35.100 69.480 70.892 1.00 61.77 C
ATOM 25 P G B 63 34.971 74.176 66.552 1.00 65.36 P
ATOM 26 OP1 G B 63 34.612 75.012 65.369 1.00 66.23 O
ATOM 27 OP2 G B 63 36.385 74.016 66.933 1.00 64.37 O
ATOM 28 O5' G B 63 34.153 74.715 67.810 1.00 65.40 O
TER

Atoms:
C2: (40.334,67.820,74.457)
OP1: (47.957,66.565,76.343)
OP2: (48.258,67.912,74.163)
C4: (40.402,68.100,72.149)
O5': (46.133,66.710,74.652)
C3': (43.446,65.459,76.949)
C1': (42.346,67.155,75.714)
O4': (43.728,67.399,75.585)
C5': (45.431,65.726,75.387)
P: (47.392,67.442,75.285)
O2: (39.729,67.829,75.542)
C4': (44.468,66.392,76.320)
C2': (42.206,65.682,76.087)
O2': (40.996,65.467,76.781)
N1: (41.693,67.495,74.446)
N3: (39.714,68.116,73.292)
N4: (39.746,68.393,71.022)
C6: (42.392,67.488,73.271)
C5: (41.793,67.781,72.111)
O3': (43.196,65.896,78.273)
OP1: (38.655,70.774,64.039)
OP2: (39.801,70.071,66.236)
C3': (34.938,71.622,67.090)
C1': (34.361,69.799,68.489)
C5': (36.073,70.114,65.339)
O6: (37.349,68.652,73.548)
O4': (34.862,69.285,67.271)
C8: (36.663,69.214,69.365)
C2: (34.006,69.590,72.820)
C6: (36.378,68.971,72.866)
C5: (36.302,69.120,71.464)
C4: (35.100,69.480,70.892)
P: (38.681,69.922,65.263)
C4': (34.916,70.340,66.282)
C2': (34.050,71.281,68.281)
O2': (32.673,71.403,67.986)
N1: (35.158,69.233,73.478)
N2: (32.925,69.802,73.585)
N3: (33.920,69.729,71.504)
N7: (37.278,68.958,70.491)
N9: (35.338,69.521,69.536)
O5': (37.308,70.152,66.042)
O3': (34.411,72.692,66.324)
Image (generated by PyMOL):
PyMOL image
show in jmol