Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B41:B61
Extra
PDB:
ATOM 1 O3' G A 40 47.200 68.967 76.470 1.00 85.55 O
ATOM 2 P C A 41 47.692 67.580 75.813 1.00 85.77 P
ATOM 3 OP1 C A 41 47.951 66.618 76.917 1.00 86.21 O
ATOM 4 OP2 C A 41 48.777 67.891 74.839 1.00 84.45 O
ATOM 5 O5' C A 41 46.418 67.060 75.008 1.00 84.03 O
ATOM 6 C5' C A 41 45.613 66.014 75.532 1.00 81.87 C
ATOM 7 C4' C A 41 44.654 66.580 76.539 1.00 80.16 C
ATOM 8 O4' C A 41 43.816 67.568 75.895 1.00 79.44 O
ATOM 9 C3' C A 41 43.726 65.581 77.210 1.00 79.75 C
ATOM 10 O3' C A 41 43.522 65.985 78.558 1.00 79.75 O
ATOM 11 C2' C A 41 42.426 65.746 76.431 1.00 79.05 C
ATOM 12 O2' C A 41 41.262 65.428 77.173 1.00 79.20 O
ATOM 13 C1' C A 41 42.462 67.235 76.088 1.00 77.50 C
ATOM 14 N1 C A 41 41.748 67.569 74.859 1.00 73.98 N
ATOM 15 C2 C A 41 40.399 67.908 74.933 1.00 72.02 C
ATOM 16 O2 C A 41 39.846 67.918 76.043 1.00 72.15 O
ATOM 17 N3 C A 41 39.737 68.216 73.805 1.00 70.50 N
ATOM 18 C4 C A 41 40.374 68.194 72.633 1.00 70.08 C
ATOM 19 N4 C A 41 39.686 68.500 71.540 1.00 69.46 N
ATOM 20 C5 C A 41 41.750 67.854 72.532 1.00 70.46 C
ATOM 21 C6 C A 41 42.393 67.552 73.654 1.00 72.18 C
ATOM 22 P A A 42 44.033 65.048 79.760 1.00 79.67 P
ATOM 23 OP1 A A 42 45.500 65.245 79.899 1.00 78.98 O
ATOM 24 OP2 A A 42 43.488 63.681 79.549 1.00 79.31 O
ATOM 25 O5' A A 42 43.293 65.644 81.040 1.00 79.30 O
TER
ATOM 1 O3' U B 60 38.651 68.408 65.108 1.00 65.03 O
ATOM 2 P G B 61 38.674 69.921 65.647 1.00 65.60 P
ATOM 3 OP1 G B 61 38.584 70.805 64.465 1.00 67.06 O
ATOM 4 OP2 G B 61 39.821 70.060 66.589 1.00 64.35 O
ATOM 5 O5' G B 61 37.313 70.072 66.462 1.00 63.87 O
ATOM 6 C5' G B 61 36.059 70.080 65.791 1.00 60.70 C
ATOM 7 C4' G B 61 34.930 70.271 66.786 1.00 59.68 C
ATOM 8 O4' G B 61 34.931 69.194 67.763 1.00 58.46 O
ATOM 9 C3' G B 61 34.940 71.541 67.628 1.00 58.31 C
ATOM 10 O3' G B 61 34.387 72.643 66.909 1.00 59.18 O
ATOM 11 C2' G B 61 34.065 71.147 68.817 1.00 56.68 C
ATOM 12 O2' G B 61 32.690 71.206 68.510 1.00 54.50 O
ATOM 13 C1' G B 61 34.415 69.672 68.991 1.00 55.89 C
ATOM 14 N9 G B 61 35.399 69.423 70.035 1.00 53.78 N
ATOM 15 C8 G B 61 36.730 69.134 69.866 1.00 54.44 C
ATOM 16 N7 G B 61 37.351 68.912 70.993 1.00 53.57 N
ATOM 17 C5 G B 61 36.371 69.076 71.961 1.00 52.40 C
ATOM 18 C6 G B 61 36.451 68.958 73.365 1.00 52.13 C
ATOM 19 O6 G B 61 37.433 68.676 74.053 1.00 52.86 O
ATOM 20 N1 G B 61 35.224 69.214 73.975 1.00 50.06 N
ATOM 21 C2 G B 61 34.065 69.540 73.312 1.00 49.50 C
ATOM 22 N2 G B 61 32.976 69.750 74.071 1.00 44.12 N
ATOM 23 N3 G B 61 33.981 69.654 71.993 1.00 51.31 N
ATOM 24 C4 G B 61 35.164 69.406 71.388 1.00 52.13 C
ATOM 25 P G B 62 35.017 74.112 67.087 1.00 58.07 P
ATOM 26 OP1 G B 62 34.635 74.908 65.894 1.00 58.82 O
ATOM 27 OP2 G B 62 36.443 73.954 67.428 1.00 56.98 O
ATOM 28 O5' G B 62 34.255 74.714 68.350 1.00 57.89 O
TER
ATOM 2 P C A 41 47.692 67.580 75.813 1.00 85.77 P
ATOM 3 OP1 C A 41 47.951 66.618 76.917 1.00 86.21 O
ATOM 4 OP2 C A 41 48.777 67.891 74.839 1.00 84.45 O
ATOM 5 O5' C A 41 46.418 67.060 75.008 1.00 84.03 O
ATOM 6 C5' C A 41 45.613 66.014 75.532 1.00 81.87 C
ATOM 7 C4' C A 41 44.654 66.580 76.539 1.00 80.16 C
ATOM 8 O4' C A 41 43.816 67.568 75.895 1.00 79.44 O
ATOM 9 C3' C A 41 43.726 65.581 77.210 1.00 79.75 C
ATOM 10 O3' C A 41 43.522 65.985 78.558 1.00 79.75 O
ATOM 11 C2' C A 41 42.426 65.746 76.431 1.00 79.05 C
ATOM 12 O2' C A 41 41.262 65.428 77.173 1.00 79.20 O
ATOM 13 C1' C A 41 42.462 67.235 76.088 1.00 77.50 C
ATOM 14 N1 C A 41 41.748 67.569 74.859 1.00 73.98 N
ATOM 15 C2 C A 41 40.399 67.908 74.933 1.00 72.02 C
ATOM 16 O2 C A 41 39.846 67.918 76.043 1.00 72.15 O
ATOM 17 N3 C A 41 39.737 68.216 73.805 1.00 70.50 N
ATOM 18 C4 C A 41 40.374 68.194 72.633 1.00 70.08 C
ATOM 19 N4 C A 41 39.686 68.500 71.540 1.00 69.46 N
ATOM 20 C5 C A 41 41.750 67.854 72.532 1.00 70.46 C
ATOM 21 C6 C A 41 42.393 67.552 73.654 1.00 72.18 C
ATOM 22 P A A 42 44.033 65.048 79.760 1.00 79.67 P
ATOM 23 OP1 A A 42 45.500 65.245 79.899 1.00 78.98 O
ATOM 24 OP2 A A 42 43.488 63.681 79.549 1.00 79.31 O
ATOM 25 O5' A A 42 43.293 65.644 81.040 1.00 79.30 O
TER
ATOM 1 O3' U B 60 38.651 68.408 65.108 1.00 65.03 O
ATOM 2 P G B 61 38.674 69.921 65.647 1.00 65.60 P
ATOM 3 OP1 G B 61 38.584 70.805 64.465 1.00 67.06 O
ATOM 4 OP2 G B 61 39.821 70.060 66.589 1.00 64.35 O
ATOM 5 O5' G B 61 37.313 70.072 66.462 1.00 63.87 O
ATOM 6 C5' G B 61 36.059 70.080 65.791 1.00 60.70 C
ATOM 7 C4' G B 61 34.930 70.271 66.786 1.00 59.68 C
ATOM 8 O4' G B 61 34.931 69.194 67.763 1.00 58.46 O
ATOM 9 C3' G B 61 34.940 71.541 67.628 1.00 58.31 C
ATOM 10 O3' G B 61 34.387 72.643 66.909 1.00 59.18 O
ATOM 11 C2' G B 61 34.065 71.147 68.817 1.00 56.68 C
ATOM 12 O2' G B 61 32.690 71.206 68.510 1.00 54.50 O
ATOM 13 C1' G B 61 34.415 69.672 68.991 1.00 55.89 C
ATOM 14 N9 G B 61 35.399 69.423 70.035 1.00 53.78 N
ATOM 15 C8 G B 61 36.730 69.134 69.866 1.00 54.44 C
ATOM 16 N7 G B 61 37.351 68.912 70.993 1.00 53.57 N
ATOM 17 C5 G B 61 36.371 69.076 71.961 1.00 52.40 C
ATOM 18 C6 G B 61 36.451 68.958 73.365 1.00 52.13 C
ATOM 19 O6 G B 61 37.433 68.676 74.053 1.00 52.86 O
ATOM 20 N1 G B 61 35.224 69.214 73.975 1.00 50.06 N
ATOM 21 C2 G B 61 34.065 69.540 73.312 1.00 49.50 C
ATOM 22 N2 G B 61 32.976 69.750 74.071 1.00 44.12 N
ATOM 23 N3 G B 61 33.981 69.654 71.993 1.00 51.31 N
ATOM 24 C4 G B 61 35.164 69.406 71.388 1.00 52.13 C
ATOM 25 P G B 62 35.017 74.112 67.087 1.00 58.07 P
ATOM 26 OP1 G B 62 34.635 74.908 65.894 1.00 58.82 O
ATOM 27 OP2 G B 62 36.443 73.954 67.428 1.00 56.98 O
ATOM 28 O5' G B 62 34.255 74.714 68.350 1.00 57.89 O
TER
Atoms:
C2: (40.399,67.908,74.933)
OP1: (47.951,66.618,76.917)
OP2: (48.777,67.891,74.839)
C4: (40.374,68.194,72.633)
O5': (46.418,67.060,75.008)
C3': (43.726,65.581,77.210)
C1': (42.462,67.235,76.088)
O4': (43.816,67.568,75.895)
C5': (45.613,66.014,75.532)
P: (47.692,67.580,75.813)
O2: (39.846,67.918,76.043)
C4': (44.654,66.580,76.539)
C2': (42.426,65.746,76.431)
O2': (41.262,65.428,77.173)
N1: (41.748,67.569,74.859)
N3: (39.737,68.216,73.805)
N4: (39.686,68.500,71.540)
C6: (42.393,67.552,73.654)
C5: (41.750,67.854,72.532)
O3': (43.522,65.985,78.558)
OP1: (47.951,66.618,76.917)
OP2: (48.777,67.891,74.839)
C4: (40.374,68.194,72.633)
O5': (46.418,67.060,75.008)
C3': (43.726,65.581,77.210)
C1': (42.462,67.235,76.088)
O4': (43.816,67.568,75.895)
C5': (45.613,66.014,75.532)
P: (47.692,67.580,75.813)
O2: (39.846,67.918,76.043)
C4': (44.654,66.580,76.539)
C2': (42.426,65.746,76.431)
O2': (41.262,65.428,77.173)
N1: (41.748,67.569,74.859)
N3: (39.737,68.216,73.805)
N4: (39.686,68.500,71.540)
C6: (42.393,67.552,73.654)
C5: (41.750,67.854,72.532)
O3': (43.522,65.985,78.558)
OP1: (38.584,70.805,64.465)
OP2: (39.821,70.060,66.589)
C3': (34.940,71.541,67.628)
C1': (34.415,69.672,68.991)
C5': (36.059,70.080,65.791)
O6: (37.433,68.676,74.053)
O4': (34.931,69.194,67.763)
C8: (36.730,69.134,69.866)
C2: (34.065,69.540,73.312)
C6: (36.451,68.958,73.365)
C5: (36.371,69.076,71.961)
C4: (35.164,69.406,71.388)
P: (38.674,69.921,65.647)
C4': (34.930,70.271,66.786)
C2': (34.065,71.147,68.817)
O2': (32.690,71.206,68.510)
N1: (35.224,69.214,73.975)
N2: (32.976,69.750,74.071)
N3: (33.981,69.654,71.993)
N7: (37.351,68.912,70.993)
N9: (35.399,69.423,70.035)
O5': (37.313,70.072,66.462)
O3': (34.387,72.643,66.909)
OP2: (39.821,70.060,66.589)
C3': (34.940,71.541,67.628)
C1': (34.415,69.672,68.991)
C5': (36.059,70.080,65.791)
O6: (37.433,68.676,74.053)
O4': (34.931,69.194,67.763)
C8: (36.730,69.134,69.866)
C2: (34.065,69.540,73.312)
C6: (36.451,68.958,73.365)
C5: (36.371,69.076,71.961)
C4: (35.164,69.406,71.388)
P: (38.674,69.921,65.647)
C4': (34.930,70.271,66.786)
C2': (34.065,71.147,68.817)
O2': (32.690,71.206,68.510)
N1: (35.224,69.214,73.975)
N2: (32.976,69.750,74.071)
N3: (33.981,69.654,71.993)
N7: (37.351,68.912,70.993)
N9: (35.399,69.423,70.035)
O5': (37.313,70.072,66.462)
O3': (34.387,72.643,66.909)
Image (generated by PyMOL):