Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:9112:965
Extra
PDB:
ATOM 1 O3' U A 111 49.608 33.676 113.798 1.00 67.34 O
ATOM 2 P C A 112 50.016 32.191 114.237 1.00 66.06 P
ATOM 3 OP1 C A 112 49.998 31.345 113.019 1.00 66.16 O
ATOM 4 OP2 C A 112 49.181 31.819 115.406 1.00 68.58 O
ATOM 5 O5' C A 112 51.526 32.321 114.722 1.00 64.61 O
ATOM 6 C5' C A 112 52.516 32.852 113.838 1.00 63.99 C
ATOM 7 C4' C A 112 53.806 32.081 113.951 1.00 62.55 C
ATOM 8 O4' C A 112 54.560 32.553 115.096 1.00 62.74 O
ATOM 9 C3' C A 112 53.694 30.567 114.101 1.00 62.47 C
ATOM 10 O3' C A 112 54.619 29.936 113.228 1.00 62.35 O
ATOM 11 C2' C A 112 54.110 30.339 115.554 1.00 62.33 C
ATOM 12 O2' C A 112 54.696 29.069 115.772 1.00 62.09 O
ATOM 13 C1' C A 112 55.139 31.450 115.743 1.00 61.19 C
ATOM 14 N1 C A 112 55.473 31.833 117.133 1.00 60.13 N
ATOM 15 C2 C A 112 56.739 32.405 117.390 1.00 60.09 C
ATOM 16 O2 C A 112 57.515 32.628 116.439 1.00 59.18 O
ATOM 17 N3 C A 112 57.083 32.700 118.667 1.00 59.77 N
ATOM 18 C4 C A 112 56.226 32.459 119.664 1.00 60.28 C
ATOM 19 N4 C A 112 56.625 32.742 120.906 1.00 58.98 N
ATOM 20 C5 C A 112 54.924 31.912 119.430 1.00 59.06 C
ATOM 21 C6 C A 112 54.591 31.623 118.163 1.00 60.06 C
ATOM 22 P G A 113 54.071 29.139 111.945 1.00 62.76 P
ATOM 23 OP1 G A 113 53.144 28.089 112.432 1.00 63.27 O
ATOM 24 OP2 G A 113 55.219 28.769 111.076 1.00 60.96 O
ATOM 25 O5' G A 113 53.198 30.226 111.179 1.00 62.84 O
TER
ATOM 1 O3' A B 64 54.786 35.370 126.500 1.00 88.51 O
ATOM 2 P G B 65 55.366 36.818 126.930 1.00 86.91 P
ATOM 3 OP1 G B 65 55.187 36.891 128.404 1.00 86.87 O
ATOM 4 OP2 G B 65 54.789 37.890 126.076 1.00 87.49 O
ATOM 5 O5' G B 65 56.935 36.719 126.652 1.00 83.49 O
ATOM 6 C5' G B 65 57.886 37.192 127.631 1.00 80.38 C
ATOM 7 C4' G B 65 59.243 37.412 127.002 1.00 77.90 C
ATOM 8 O4' G B 65 59.776 36.148 126.521 1.00 77.26 O
ATOM 9 C3' G B 65 59.284 38.311 125.777 1.00 77.26 C
ATOM 10 O3' G B 65 59.253 39.696 126.111 1.00 75.75 O
ATOM 11 C2' G B 65 60.591 37.887 125.119 1.00 76.75 C
ATOM 12 O2' G B 65 61.733 38.444 125.741 1.00 74.72 O
ATOM 13 C1' G B 65 60.566 36.374 125.359 1.00 75.70 C
ATOM 14 N9 G B 65 59.987 35.626 124.241 1.00 73.65 N
ATOM 15 C8 G B 65 58.792 34.947 124.219 1.00 72.91 C
ATOM 16 N7 G B 65 58.538 34.392 123.064 1.00 72.56 N
ATOM 17 C5 G B 65 59.631 34.721 122.275 1.00 71.95 C
ATOM 18 C6 G B 65 59.916 34.406 120.916 1.00 71.23 C
ATOM 19 O6 G B 65 59.233 33.768 120.113 1.00 70.89 O
ATOM 20 N1 G B 65 61.139 34.930 120.517 1.00 72.10 N
ATOM 21 C2 G B 65 61.978 35.672 121.315 1.00 73.51 C
ATOM 22 N2 G B 65 63.120 36.088 120.752 1.00 73.63 N
ATOM 23 N3 G B 65 61.719 35.983 122.576 1.00 72.88 N
ATOM 24 C4 G B 65 60.539 35.476 122.988 1.00 72.90 C
ATOM 25 P C B 66 58.595 40.749 125.085 1.00 74.42 P
ATOM 26 OP1 C B 66 58.519 42.061 125.776 1.00 73.89 O
ATOM 27 OP2 C B 66 57.360 40.156 124.502 1.00 73.80 O
ATOM 28 O5' C B 66 59.684 40.870 123.927 1.00 73.72 O
TER
ATOM 2 P C A 112 50.016 32.191 114.237 1.00 66.06 P
ATOM 3 OP1 C A 112 49.998 31.345 113.019 1.00 66.16 O
ATOM 4 OP2 C A 112 49.181 31.819 115.406 1.00 68.58 O
ATOM 5 O5' C A 112 51.526 32.321 114.722 1.00 64.61 O
ATOM 6 C5' C A 112 52.516 32.852 113.838 1.00 63.99 C
ATOM 7 C4' C A 112 53.806 32.081 113.951 1.00 62.55 C
ATOM 8 O4' C A 112 54.560 32.553 115.096 1.00 62.74 O
ATOM 9 C3' C A 112 53.694 30.567 114.101 1.00 62.47 C
ATOM 10 O3' C A 112 54.619 29.936 113.228 1.00 62.35 O
ATOM 11 C2' C A 112 54.110 30.339 115.554 1.00 62.33 C
ATOM 12 O2' C A 112 54.696 29.069 115.772 1.00 62.09 O
ATOM 13 C1' C A 112 55.139 31.450 115.743 1.00 61.19 C
ATOM 14 N1 C A 112 55.473 31.833 117.133 1.00 60.13 N
ATOM 15 C2 C A 112 56.739 32.405 117.390 1.00 60.09 C
ATOM 16 O2 C A 112 57.515 32.628 116.439 1.00 59.18 O
ATOM 17 N3 C A 112 57.083 32.700 118.667 1.00 59.77 N
ATOM 18 C4 C A 112 56.226 32.459 119.664 1.00 60.28 C
ATOM 19 N4 C A 112 56.625 32.742 120.906 1.00 58.98 N
ATOM 20 C5 C A 112 54.924 31.912 119.430 1.00 59.06 C
ATOM 21 C6 C A 112 54.591 31.623 118.163 1.00 60.06 C
ATOM 22 P G A 113 54.071 29.139 111.945 1.00 62.76 P
ATOM 23 OP1 G A 113 53.144 28.089 112.432 1.00 63.27 O
ATOM 24 OP2 G A 113 55.219 28.769 111.076 1.00 60.96 O
ATOM 25 O5' G A 113 53.198 30.226 111.179 1.00 62.84 O
TER
ATOM 1 O3' A B 64 54.786 35.370 126.500 1.00 88.51 O
ATOM 2 P G B 65 55.366 36.818 126.930 1.00 86.91 P
ATOM 3 OP1 G B 65 55.187 36.891 128.404 1.00 86.87 O
ATOM 4 OP2 G B 65 54.789 37.890 126.076 1.00 87.49 O
ATOM 5 O5' G B 65 56.935 36.719 126.652 1.00 83.49 O
ATOM 6 C5' G B 65 57.886 37.192 127.631 1.00 80.38 C
ATOM 7 C4' G B 65 59.243 37.412 127.002 1.00 77.90 C
ATOM 8 O4' G B 65 59.776 36.148 126.521 1.00 77.26 O
ATOM 9 C3' G B 65 59.284 38.311 125.777 1.00 77.26 C
ATOM 10 O3' G B 65 59.253 39.696 126.111 1.00 75.75 O
ATOM 11 C2' G B 65 60.591 37.887 125.119 1.00 76.75 C
ATOM 12 O2' G B 65 61.733 38.444 125.741 1.00 74.72 O
ATOM 13 C1' G B 65 60.566 36.374 125.359 1.00 75.70 C
ATOM 14 N9 G B 65 59.987 35.626 124.241 1.00 73.65 N
ATOM 15 C8 G B 65 58.792 34.947 124.219 1.00 72.91 C
ATOM 16 N7 G B 65 58.538 34.392 123.064 1.00 72.56 N
ATOM 17 C5 G B 65 59.631 34.721 122.275 1.00 71.95 C
ATOM 18 C6 G B 65 59.916 34.406 120.916 1.00 71.23 C
ATOM 19 O6 G B 65 59.233 33.768 120.113 1.00 70.89 O
ATOM 20 N1 G B 65 61.139 34.930 120.517 1.00 72.10 N
ATOM 21 C2 G B 65 61.978 35.672 121.315 1.00 73.51 C
ATOM 22 N2 G B 65 63.120 36.088 120.752 1.00 73.63 N
ATOM 23 N3 G B 65 61.719 35.983 122.576 1.00 72.88 N
ATOM 24 C4 G B 65 60.539 35.476 122.988 1.00 72.90 C
ATOM 25 P C B 66 58.595 40.749 125.085 1.00 74.42 P
ATOM 26 OP1 C B 66 58.519 42.061 125.776 1.00 73.89 O
ATOM 27 OP2 C B 66 57.360 40.156 124.502 1.00 73.80 O
ATOM 28 O5' C B 66 59.684 40.870 123.927 1.00 73.72 O
TER
Atoms:
C2: (56.739,32.405,117.390)
OP1: (49.998,31.345,113.019)
OP2: (49.181,31.819,115.406)
C4: (56.226,32.459,119.664)
O5': (51.526,32.321,114.722)
C3': (53.694,30.567,114.101)
C1': (55.139,31.450,115.743)
O4': (54.560,32.553,115.096)
C5': (52.516,32.852,113.838)
P: (50.016,32.191,114.237)
O2: (57.515,32.628,116.439)
C4': (53.806,32.081,113.951)
C2': (54.110,30.339,115.554)
O2': (54.696,29.069,115.772)
N1: (55.473,31.833,117.133)
N3: (57.083,32.700,118.667)
N4: (56.625,32.742,120.906)
C6: (54.591,31.623,118.163)
C5: (54.924,31.912,119.430)
O3': (54.619,29.936,113.228)
OP1: (49.998,31.345,113.019)
OP2: (49.181,31.819,115.406)
C4: (56.226,32.459,119.664)
O5': (51.526,32.321,114.722)
C3': (53.694,30.567,114.101)
C1': (55.139,31.450,115.743)
O4': (54.560,32.553,115.096)
C5': (52.516,32.852,113.838)
P: (50.016,32.191,114.237)
O2: (57.515,32.628,116.439)
C4': (53.806,32.081,113.951)
C2': (54.110,30.339,115.554)
O2': (54.696,29.069,115.772)
N1: (55.473,31.833,117.133)
N3: (57.083,32.700,118.667)
N4: (56.625,32.742,120.906)
C6: (54.591,31.623,118.163)
C5: (54.924,31.912,119.430)
O3': (54.619,29.936,113.228)
OP1: (55.187,36.891,128.404)
OP2: (54.789,37.890,126.076)
C3': (59.284,38.311,125.777)
C1': (60.566,36.374,125.359)
C5': (57.886,37.192,127.631)
O6: (59.233,33.768,120.113)
O4': (59.776,36.148,126.521)
C8: (58.792,34.947,124.219)
C2: (61.978,35.672,121.315)
C6: (59.916,34.406,120.916)
C5: (59.631,34.721,122.275)
C4: (60.539,35.476,122.988)
P: (55.366,36.818,126.930)
C4': (59.243,37.412,127.002)
C2': (60.591,37.887,125.119)
O2': (61.733,38.444,125.741)
N1: (61.139,34.930,120.517)
N2: (63.120,36.088,120.752)
N3: (61.719,35.983,122.576)
N7: (58.538,34.392,123.064)
N9: (59.987,35.626,124.241)
O5': (56.935,36.719,126.652)
O3': (59.253,39.696,126.111)
OP2: (54.789,37.890,126.076)
C3': (59.284,38.311,125.777)
C1': (60.566,36.374,125.359)
C5': (57.886,37.192,127.631)
O6: (59.233,33.768,120.113)
O4': (59.776,36.148,126.521)
C8: (58.792,34.947,124.219)
C2: (61.978,35.672,121.315)
C6: (59.916,34.406,120.916)
C5: (59.631,34.721,122.275)
C4: (60.539,35.476,122.988)
P: (55.366,36.818,126.930)
C4': (59.243,37.412,127.002)
C2': (60.591,37.887,125.119)
O2': (61.733,38.444,125.741)
N1: (61.139,34.930,120.517)
N2: (63.120,36.088,120.752)
N3: (61.719,35.983,122.576)
N7: (58.538,34.392,123.064)
N9: (59.987,35.626,124.241)
O5': (56.935,36.719,126.652)
O3': (59.253,39.696,126.111)
Image (generated by PyMOL):