ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 437D:A7:A11

Extra

PDB:
ATOM 1 O3' G A 6 3.812 15.624 40.827 1.00 21.04 O
ATOM 2 P C A 7 4.293 16.064 42.303 1.00 30.31 P
ATOM 3 OP1 C A 7 3.720 15.063 43.255 1.00 31.62 O
ATOM 4 OP2 C A 7 4.048 17.500 42.487 1.00 24.77 O
ATOM 5 O5' C A 7 5.844 15.786 42.128 1.00 30.93 O
ATOM 6 C5' C A 7 6.860 16.486 42.837 1.00 24.43 C
ATOM 7 C4' C A 7 8.144 15.765 42.544 1.00 17.17 C
ATOM 8 O4' C A 7 8.479 15.944 41.146 1.00 20.39 O
ATOM 9 C3' C A 7 9.409 16.220 43.259 1.00 16.40 C
ATOM 10 O3' C A 7 9.402 15.697 44.566 1.00 17.47 O
ATOM 11 C2' C A 7 10.497 15.639 42.369 1.00 21.53 C
ATOM 12 O2' C A 7 10.665 14.260 42.637 1.00 23.29 O
ATOM 13 C1' C A 7 9.913 15.881 40.974 1.00 22.81 C
ATOM 14 N1 C A 7 10.400 17.220 40.485 1.00 19.71 N
ATOM 15 C2 C A 7 11.726 17.311 40.058 1.00 22.00 C
ATOM 16 O2 C A 7 12.394 16.274 40.034 1.00 19.73 O
ATOM 17 N3 C A 7 12.234 18.520 39.703 1.00 19.72 N
ATOM 18 C4 C A 7 11.490 19.608 39.775 1.00 21.57 C
ATOM 19 N4 C A 7 12.086 20.794 39.493 1.00 17.92 N
ATOM 20 C5 C A 7 10.108 19.551 40.157 1.00 19.60 C
ATOM 21 C6 C A 7 9.611 18.345 40.505 1.00 20.61 C
ATOM 22 P A A 8 10.113 16.558 45.720 1.00 20.15 P
ATOM 23 OP1 A A 8 11.500 17.039 45.230 1.00 29.12 O
ATOM 24 OP2 A A 8 10.026 15.803 46.968 1.00 22.76 O
ATOM 25 O5' A A 8 9.298 17.907 45.876 1.00 21.46 O
TER

ATOM 1 O3' C B 10 14.585 26.740 39.826 1.00 22.57 O
ATOM 2 P G B 11 14.163 26.364 38.342 1.00 23.39 P
ATOM 3 OP1 G B 11 14.146 27.670 37.637 1.00 26.64 O
ATOM 4 OP2 G B 11 12.933 25.445 38.311 1.00 22.48 O
ATOM 5 O5' G B 11 15.364 25.420 37.868 1.00 22.41 O
ATOM 6 C5' G B 11 16.714 25.963 37.782 1.00 26.13 C
ATOM 7 C4' G B 11 17.706 24.884 37.372 1.00 18.61 C
ATOM 8 O4' G B 11 17.874 23.927 38.431 1.00 21.35 O
ATOM 9 C3' G B 11 17.372 24.047 36.150 1.00 16.63 C
ATOM 10 C2' G B 11 18.233 22.804 36.366 1.00 28.70 C
ATOM 11 O2' G B 11 19.619 23.035 36.046 1.00 26.58 O
ATOM 12 C1' G B 11 18.170 22.656 37.883 1.00 20.14 C
ATOM 13 N9 G B 11 17.104 21.710 38.229 1.00 16.99 N
ATOM 14 C8 G B 11 15.781 21.977 38.553 1.00 24.09 C
ATOM 15 N7 G B 11 15.124 20.897 38.863 1.00 21.41 N
ATOM 16 C5 G B 11 16.061 19.873 38.699 1.00 19.17 C
ATOM 17 C6 G B 11 15.937 18.486 38.862 1.00 23.82 C
ATOM 18 O6 G B 11 14.917 17.834 39.189 1.00 23.39 O
ATOM 19 N1 G B 11 17.152 17.823 38.588 1.00 15.76 N
ATOM 20 C2 G B 11 18.305 18.434 38.182 1.00 20.73 C
ATOM 21 N2 G B 11 19.331 17.634 37.971 1.00 19.07 N
ATOM 22 N3 G B 11 18.415 19.744 38.004 1.00 17.48 N
ATOM 23 C4 G B 11 17.273 20.384 38.301 1.00 20.10 C
ATOM 24 O3' G B 11 17.862 24.740 35.029 0.60 25.84 O
ATOM 25 P U B 12 16.872 25.290 33.894 0.60 40.95 P
ATOM 26 OP1 U B 12 17.023 26.763 33.773 0.60 42.37 O
ATOM 27 OP2 U B 12 15.525 24.713 33.991 0.60 34.32 O
ATOM 28 O5' U B 12 17.533 24.671 32.604 0.60 22.32 O
TER

Atoms:
C2: (11.726,17.311,40.058)
OP1: (3.720,15.063,43.255)
OP2: (4.048,17.500,42.487)
C4: (11.490,19.608,39.775)
O5': (5.844,15.786,42.128)
C3': (9.409,16.220,43.259)
C1': (9.913,15.881,40.974)
O4': (8.479,15.944,41.146)
C5': (6.860,16.486,42.837)
P: (4.293,16.064,42.303)
O2: (12.394,16.274,40.034)
C4': (8.144,15.765,42.544)
C2': (10.497,15.639,42.369)
O2': (10.665,14.260,42.637)
N1: (10.400,17.220,40.485)
N3: (12.234,18.520,39.703)
N4: (12.086,20.794,39.493)
C6: (9.611,18.345,40.505)
C5: (10.108,19.551,40.157)
O3': (9.402,15.697,44.566)
OP1: (14.146,27.670,37.637)
OP2: (12.933,25.445,38.311)
C3': (17.372,24.047,36.150)
C1': (18.170,22.656,37.883)
C5': (16.714,25.963,37.782)
O6: (14.917,17.834,39.189)
O4': (17.874,23.927,38.431)
C8: (15.781,21.977,38.553)
C2: (18.305,18.434,38.182)
C6: (15.937,18.486,38.862)
C5: (16.061,19.873,38.699)
C4: (17.273,20.384,38.301)
P: (14.163,26.364,38.342)
C4': (17.706,24.884,37.372)
C2': (18.233,22.804,36.366)
O2': (19.619,23.035,36.046)
N1: (17.152,17.823,38.588)
N2: (19.331,17.634,37.971)
N3: (18.415,19.744,38.004)
N7: (15.124,20.897,38.863)
N9: (17.104,21.710,38.229)
O5': (15.364,25.420,37.868)
O3': (17.862,24.740,35.029)
Image (generated by PyMOL):
PyMOL image
show in jmol