Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:A7:B5
Extra
PDB:
ATOM 1 O3' U A 6 37.793 5.407 54.458 1.00 56.21 O
ATOM 2 P C A 7 37.397 5.138 55.980 1.00 66.50 P
ATOM 3 OP1 C A 7 37.458 3.680 56.223 1.00 72.14 O
ATOM 4 OP2 C A 7 36.140 5.879 56.219 1.00 60.38 O
ATOM 5 O5' C A 7 38.543 5.842 56.826 1.00 67.14 O
ATOM 6 C5' C A 7 39.907 5.542 56.584 1.00 70.82 C
ATOM 7 C4' C A 7 40.772 6.513 57.331 1.00 73.79 C
ATOM 8 O4' C A 7 40.679 7.819 56.709 1.00 74.46 O
ATOM 9 C3' C A 7 40.309 6.749 58.753 1.00 74.75 C
ATOM 10 O3' C A 7 40.802 5.756 59.631 1.00 79.07 O
ATOM 11 C2' C A 7 40.885 8.120 59.062 1.00 74.13 C
ATOM 12 O2' C A 7 42.237 8.067 59.459 1.00 69.64 O
ATOM 13 C1' C A 7 40.722 8.822 57.711 1.00 76.36 C
ATOM 14 N1 C A 7 39.469 9.587 57.654 1.00 78.46 N
ATOM 15 C2 C A 7 39.378 10.777 58.386 1.00 81.19 C
ATOM 16 O2 C A 7 40.359 11.150 59.046 1.00 85.45 O
ATOM 17 N3 C A 7 38.229 11.486 58.362 1.00 80.00 N
ATOM 18 C4 C A 7 37.194 11.045 57.651 1.00 78.99 C
ATOM 19 N4 C A 7 36.073 11.772 57.667 1.00 80.31 N
ATOM 20 C5 C A 7 37.259 9.836 56.891 1.00 80.01 C
ATOM 21 C6 C A 7 38.407 9.149 56.916 1.00 77.47 C
ATOM 22 P C A 8 39.990 5.425 60.970 1.00 83.29 P
ATOM 23 OP1 C A 8 40.694 4.329 61.678 1.00 84.18 O
ATOM 24 OP2 C A 8 38.568 5.255 60.577 1.00 83.53 O
ATOM 25 O5' C A 8 40.125 6.758 61.829 1.00 82.07 O
TER
ATOM 1 O3' G B 4 31.895 19.959 65.905 1.00 77.77 O
ATOM 2 P A B 5 32.633 20.689 64.692 1.00 75.03 P
ATOM 3 OP1 A B 5 32.899 22.090 65.100 1.00 78.52 O
ATOM 4 OP2 A B 5 31.833 20.408 63.471 1.00 74.91 O
ATOM 5 O5' A B 5 34.015 19.919 64.577 1.00 71.05 O
ATOM 6 C5' A B 5 34.944 19.941 65.649 1.00 69.61 C
ATOM 7 C4' A B 5 36.134 19.098 65.301 1.00 70.95 C
ATOM 8 O4' A B 5 35.699 17.722 65.167 1.00 69.73 O
ATOM 9 C3' A B 5 36.755 19.422 63.953 1.00 69.64 C
ATOM 10 O3' A B 5 37.688 20.488 64.057 1.00 68.16 O
ATOM 11 C2' A B 5 37.440 18.114 63.600 1.00 68.15 C
ATOM 12 O2' A B 5 38.668 17.962 64.278 1.00 62.80 O
ATOM 13 C1' A B 5 36.424 17.098 64.123 1.00 68.46 C
ATOM 14 N9 A B 5 35.483 16.704 63.078 1.00 71.15 N
ATOM 15 C8 A B 5 34.238 17.210 62.789 1.00 70.82 C
ATOM 16 N7 A B 5 33.668 16.646 61.750 1.00 68.72 N
ATOM 17 C5 A B 5 34.598 15.704 61.331 1.00 71.00 C
ATOM 18 C6 A B 5 34.606 14.777 60.267 1.00 70.98 C
ATOM 19 N6 A B 5 33.612 14.640 59.389 1.00 72.56 N
ATOM 20 N1 A B 5 35.691 13.985 60.134 1.00 69.93 N
ATOM 21 C2 A B 5 36.694 14.118 61.011 1.00 71.31 C
ATOM 22 N3 A B 5 36.806 14.948 62.046 1.00 69.98 N
ATOM 23 C4 A B 5 35.714 15.723 62.149 1.00 71.21 C
ATOM 24 P G B 6 37.946 21.446 62.792 1.00 68.02 P
ATOM 25 OP1 G B 6 39.115 22.311 63.092 1.00 65.55 O
ATOM 26 OP2 G B 6 36.645 22.062 62.403 1.00 62.74 O
ATOM 27 O5' G B 6 38.398 20.446 61.644 1.00 64.33 O
TER
ATOM 2 P C A 7 37.397 5.138 55.980 1.00 66.50 P
ATOM 3 OP1 C A 7 37.458 3.680 56.223 1.00 72.14 O
ATOM 4 OP2 C A 7 36.140 5.879 56.219 1.00 60.38 O
ATOM 5 O5' C A 7 38.543 5.842 56.826 1.00 67.14 O
ATOM 6 C5' C A 7 39.907 5.542 56.584 1.00 70.82 C
ATOM 7 C4' C A 7 40.772 6.513 57.331 1.00 73.79 C
ATOM 8 O4' C A 7 40.679 7.819 56.709 1.00 74.46 O
ATOM 9 C3' C A 7 40.309 6.749 58.753 1.00 74.75 C
ATOM 10 O3' C A 7 40.802 5.756 59.631 1.00 79.07 O
ATOM 11 C2' C A 7 40.885 8.120 59.062 1.00 74.13 C
ATOM 12 O2' C A 7 42.237 8.067 59.459 1.00 69.64 O
ATOM 13 C1' C A 7 40.722 8.822 57.711 1.00 76.36 C
ATOM 14 N1 C A 7 39.469 9.587 57.654 1.00 78.46 N
ATOM 15 C2 C A 7 39.378 10.777 58.386 1.00 81.19 C
ATOM 16 O2 C A 7 40.359 11.150 59.046 1.00 85.45 O
ATOM 17 N3 C A 7 38.229 11.486 58.362 1.00 80.00 N
ATOM 18 C4 C A 7 37.194 11.045 57.651 1.00 78.99 C
ATOM 19 N4 C A 7 36.073 11.772 57.667 1.00 80.31 N
ATOM 20 C5 C A 7 37.259 9.836 56.891 1.00 80.01 C
ATOM 21 C6 C A 7 38.407 9.149 56.916 1.00 77.47 C
ATOM 22 P C A 8 39.990 5.425 60.970 1.00 83.29 P
ATOM 23 OP1 C A 8 40.694 4.329 61.678 1.00 84.18 O
ATOM 24 OP2 C A 8 38.568 5.255 60.577 1.00 83.53 O
ATOM 25 O5' C A 8 40.125 6.758 61.829 1.00 82.07 O
TER
ATOM 1 O3' G B 4 31.895 19.959 65.905 1.00 77.77 O
ATOM 2 P A B 5 32.633 20.689 64.692 1.00 75.03 P
ATOM 3 OP1 A B 5 32.899 22.090 65.100 1.00 78.52 O
ATOM 4 OP2 A B 5 31.833 20.408 63.471 1.00 74.91 O
ATOM 5 O5' A B 5 34.015 19.919 64.577 1.00 71.05 O
ATOM 6 C5' A B 5 34.944 19.941 65.649 1.00 69.61 C
ATOM 7 C4' A B 5 36.134 19.098 65.301 1.00 70.95 C
ATOM 8 O4' A B 5 35.699 17.722 65.167 1.00 69.73 O
ATOM 9 C3' A B 5 36.755 19.422 63.953 1.00 69.64 C
ATOM 10 O3' A B 5 37.688 20.488 64.057 1.00 68.16 O
ATOM 11 C2' A B 5 37.440 18.114 63.600 1.00 68.15 C
ATOM 12 O2' A B 5 38.668 17.962 64.278 1.00 62.80 O
ATOM 13 C1' A B 5 36.424 17.098 64.123 1.00 68.46 C
ATOM 14 N9 A B 5 35.483 16.704 63.078 1.00 71.15 N
ATOM 15 C8 A B 5 34.238 17.210 62.789 1.00 70.82 C
ATOM 16 N7 A B 5 33.668 16.646 61.750 1.00 68.72 N
ATOM 17 C5 A B 5 34.598 15.704 61.331 1.00 71.00 C
ATOM 18 C6 A B 5 34.606 14.777 60.267 1.00 70.98 C
ATOM 19 N6 A B 5 33.612 14.640 59.389 1.00 72.56 N
ATOM 20 N1 A B 5 35.691 13.985 60.134 1.00 69.93 N
ATOM 21 C2 A B 5 36.694 14.118 61.011 1.00 71.31 C
ATOM 22 N3 A B 5 36.806 14.948 62.046 1.00 69.98 N
ATOM 23 C4 A B 5 35.714 15.723 62.149 1.00 71.21 C
ATOM 24 P G B 6 37.946 21.446 62.792 1.00 68.02 P
ATOM 25 OP1 G B 6 39.115 22.311 63.092 1.00 65.55 O
ATOM 26 OP2 G B 6 36.645 22.062 62.403 1.00 62.74 O
ATOM 27 O5' G B 6 38.398 20.446 61.644 1.00 64.33 O
TER
Atoms:
C2: (39.378,10.777,58.386)
OP1: (37.458,3.680,56.223)
OP2: (36.140,5.879,56.219)
C4: (37.194,11.045,57.651)
O5': (38.543,5.842,56.826)
C3': (40.309,6.749,58.753)
C1': (40.722,8.822,57.711)
O4': (40.679,7.819,56.709)
C5': (39.907,5.542,56.584)
P: (37.397,5.138,55.980)
O2: (40.359,11.150,59.046)
C4': (40.772,6.513,57.331)
C2': (40.885,8.120,59.062)
O2': (42.237,8.067,59.459)
N1: (39.469,9.587,57.654)
N3: (38.229,11.486,58.362)
N4: (36.073,11.772,57.667)
C6: (38.407,9.149,56.916)
C5: (37.259,9.836,56.891)
O3': (40.802,5.756,59.631)
OP1: (37.458,3.680,56.223)
OP2: (36.140,5.879,56.219)
C4: (37.194,11.045,57.651)
O5': (38.543,5.842,56.826)
C3': (40.309,6.749,58.753)
C1': (40.722,8.822,57.711)
O4': (40.679,7.819,56.709)
C5': (39.907,5.542,56.584)
P: (37.397,5.138,55.980)
O2: (40.359,11.150,59.046)
C4': (40.772,6.513,57.331)
C2': (40.885,8.120,59.062)
O2': (42.237,8.067,59.459)
N1: (39.469,9.587,57.654)
N3: (38.229,11.486,58.362)
N4: (36.073,11.772,57.667)
C6: (38.407,9.149,56.916)
C5: (37.259,9.836,56.891)
O3': (40.802,5.756,59.631)
OP1: (32.899,22.090,65.100)
OP2: (31.833,20.408,63.471)
C3': (36.755,19.422,63.953)
C1': (36.424,17.098,64.123)
C5': (34.944,19.941,65.649)
O4': (35.699,17.722,65.167)
C8: (34.238,17.210,62.789)
O2': (38.668,17.962,64.278)
C6: (34.606,14.777,60.267)
C5: (34.598,15.704,61.331)
C4: (35.714,15.723,62.149)
P: (32.633,20.689,64.692)
C4': (36.134,19.098,65.301)
C2': (37.440,18.114,63.600)
C2: (36.694,14.118,61.011)
N1: (35.691,13.985,60.134)
N3: (36.806,14.948,62.046)
N6: (33.612,14.640,59.389)
N7: (33.668,16.646,61.750)
N9: (35.483,16.704,63.078)
O5': (34.015,19.919,64.577)
O3': (37.688,20.488,64.057)
OP2: (31.833,20.408,63.471)
C3': (36.755,19.422,63.953)
C1': (36.424,17.098,64.123)
C5': (34.944,19.941,65.649)
O4': (35.699,17.722,65.167)
C8: (34.238,17.210,62.789)
O2': (38.668,17.962,64.278)
C6: (34.606,14.777,60.267)
C5: (34.598,15.704,61.331)
C4: (35.714,15.723,62.149)
P: (32.633,20.689,64.692)
C4': (36.134,19.098,65.301)
C2': (37.440,18.114,63.600)
C2: (36.694,14.118,61.011)
N1: (35.691,13.985,60.134)
N3: (36.806,14.948,62.046)
N6: (33.612,14.640,59.389)
N7: (33.668,16.646,61.750)
N9: (35.483,16.704,63.078)
O5': (34.015,19.919,64.577)
O3': (37.688,20.488,64.057)
Image (generated by PyMOL):