ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A21:A22

Extra

PDB:
ATOM 1 O3' U A 20 32.694 137.686 45.981 1.00 34.52 O
ATOM 2 P C A 21 32.427 138.303 44.532 1.00 37.82 P
ATOM 3 OP1 C A 21 31.949 139.686 44.754 1.00 36.75 O
ATOM 4 OP2 C A 21 31.584 137.350 43.766 1.00 37.58 O
ATOM 5 O5' C A 21 33.858 138.327 43.841 1.00 39.44 O
ATOM 6 C5' C A 21 35.066 138.234 44.621 1.00 44.52 C
ATOM 7 C4' C A 21 36.141 139.128 44.040 1.00 47.04 C
ATOM 8 O4' C A 21 35.690 140.509 44.094 1.00 51.42 O
ATOM 9 C3' C A 21 37.472 139.110 44.781 1.00 46.04 C
ATOM 10 O3' C A 21 38.511 139.428 43.855 1.00 39.02 O
ATOM 11 C2' C A 21 37.297 140.240 45.781 1.00 49.82 C
ATOM 12 O2' C A 21 38.523 140.740 46.258 1.00 51.23 O
ATOM 13 C1' C A 21 36.564 141.264 44.919 1.00 55.14 C
ATOM 14 N1 C A 21 35.769 142.253 45.678 1.00 62.24 N
ATOM 15 C2 C A 21 36.413 143.404 46.186 1.00 65.95 C
ATOM 16 O2 C A 21 37.638 143.565 45.981 1.00 67.80 O
ATOM 17 N3 C A 21 35.686 144.310 46.884 1.00 68.42 N
ATOM 18 C4 C A 21 34.379 144.108 47.087 1.00 69.17 C
ATOM 19 N4 C A 21 33.705 145.024 47.797 1.00 71.26 N
ATOM 20 C5 C A 21 33.702 142.958 46.579 1.00 67.24 C
ATOM 21 C6 C A 21 34.427 142.065 45.890 1.00 64.91 C
ATOM 22 P G A 22 39.500 138.275 43.357 1.00 33.83 P
ATOM 23 OP1 G A 22 40.549 138.864 42.489 1.00 34.97 O
ATOM 24 OP2 G A 22 38.680 137.147 42.858 1.00 34.07 O
ATOM 25 O5' G A 22 40.203 137.790 44.690 1.00 31.29 O
TER

ATOM 1 O3' C B 21 38.511 139.428 43.855 1.00 39.02 O
ATOM 2 P G B 22 39.500 138.275 43.357 1.00 33.83 P
ATOM 3 OP1 G B 22 40.549 138.864 42.489 1.00 34.97 O
ATOM 4 OP2 G B 22 38.680 137.147 42.858 1.00 34.07 O
ATOM 5 O5' G B 22 40.203 137.790 44.690 1.00 31.29 O
ATOM 6 C5' G B 22 41.023 138.669 45.461 1.00 29.99 C
ATOM 7 C4' G B 22 41.568 137.927 46.646 1.00 28.52 C
ATOM 8 O4' G B 22 40.459 137.493 47.476 1.00 30.25 O
ATOM 9 C3' G B 22 42.288 136.641 46.286 1.00 28.22 C
ATOM 10 O3' G B 22 43.636 136.930 45.882 1.00 26.74 O
ATOM 11 C2' G B 22 42.157 135.846 47.581 1.00 29.49 C
ATOM 12 O2' G B 22 43.038 136.348 48.562 1.00 30.38 O
ATOM 13 C1' G B 22 40.729 136.203 48.014 1.00 31.01 C
ATOM 14 N9 G B 22 39.712 135.265 47.529 1.00 34.34 N
ATOM 15 C8 G B 22 38.942 135.380 46.397 1.00 34.60 C
ATOM 16 N7 G B 22 38.196 134.332 46.172 1.00 34.57 N
ATOM 17 C5 G B 22 38.469 133.481 47.233 1.00 35.97 C
ATOM 18 C6 G B 22 37.988 132.171 47.522 1.00 35.88 C
ATOM 19 O6 G B 22 37.213 131.461 46.870 1.00 37.51 O
ATOM 20 N1 G B 22 38.522 131.685 48.707 1.00 37.22 N
ATOM 21 C2 G B 22 39.411 132.351 49.511 1.00 37.74 C
ATOM 22 N2 G B 22 39.818 131.715 50.617 1.00 38.14 N
ATOM 23 N3 G B 22 39.875 133.558 49.250 1.00 38.75 N
ATOM 24 C4 G B 22 39.374 134.058 48.100 1.00 36.44 C
ATOM 25 P G B 23 44.577 135.760 45.309 1.00 28.67 P
ATOM 26 OP1 G B 23 45.943 136.289 45.079 1.00 26.95 O
ATOM 27 OP2 G B 23 43.862 135.077 44.206 1.00 26.59 O
ATOM 28 O5' G B 23 44.679 134.777 46.555 1.00 30.58 O
TER

Atoms:
C2: (36.413,143.404,46.186)
OP1: (31.949,139.686,44.754)
OP2: (31.584,137.350,43.766)
C4: (34.379,144.108,47.087)
O5': (33.858,138.327,43.841)
C3': (37.472,139.110,44.781)
C1': (36.564,141.264,44.919)
O4': (35.690,140.509,44.094)
C5': (35.066,138.234,44.621)
P: (32.427,138.303,44.532)
O2: (37.638,143.565,45.981)
C4': (36.141,139.128,44.040)
C2': (37.297,140.240,45.781)
O2': (38.523,140.740,46.258)
N1: (35.769,142.253,45.678)
N3: (35.686,144.310,46.884)
N4: (33.705,145.024,47.797)
C6: (34.427,142.065,45.890)
C5: (33.702,142.958,46.579)
O3': (38.511,139.428,43.855)
OP1: (40.549,138.864,42.489)
OP2: (38.680,137.147,42.858)
C3': (42.288,136.641,46.286)
C1': (40.729,136.203,48.014)
C5': (41.023,138.669,45.461)
O6: (37.213,131.461,46.870)
O4': (40.459,137.493,47.476)
C8: (38.942,135.380,46.397)
C2: (39.411,132.351,49.511)
C6: (37.988,132.171,47.522)
C5: (38.469,133.481,47.233)
C4: (39.374,134.058,48.100)
P: (39.500,138.275,43.357)
C4': (41.568,137.927,46.646)
C2': (42.157,135.846,47.581)
O2': (43.038,136.348,48.562)
N1: (38.522,131.685,48.707)
N2: (39.818,131.715,50.617)
N3: (39.875,133.558,49.250)
N7: (38.196,134.332,46.172)
N9: (39.712,135.265,47.529)
O5': (40.203,137.790,44.690)
O3': (43.636,136.930,45.882)
Image (generated by PyMOL):
PyMOL image
show in jmol