ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01950:01951

Extra

PDB:
ATOM 1 O3' U A1949 110.505 112.375 114.560 1.00 93.60 O
ATOM 2 P U A1950 110.996 111.804 113.140 1.00 98.16 P
ATOM 3 OP1 U A1950 111.899 110.656 113.428 1.00 98.58 O
ATOM 4 OP2 U A1950 111.487 112.930 112.303 1.00 98.60 O
ATOM 5 O5' U A1950 109.666 111.240 112.466 1.00100.89 O
ATOM 6 C5' U A1950 109.741 110.248 111.422 1.00104.26 C
ATOM 7 C4' U A1950 109.092 108.959 111.874 1.00106.03 C
ATOM 8 O4' U A1950 109.620 108.590 113.180 1.00107.89 O
ATOM 9 C3' U A1950 107.589 109.010 112.091 1.00106.01 C
ATOM 10 O3' U A1950 106.889 108.841 110.861 1.00103.33 O
ATOM 11 C2' U A1950 107.371 107.848 113.052 1.00107.98 C
ATOM 12 O2' U A1950 107.395 106.584 112.413 1.00108.37 O
ATOM 13 C1' U A1950 108.599 107.977 113.957 1.00109.43 C
ATOM 14 N1 U A1950 108.355 108.797 115.158 1.00111.82 N
ATOM 15 C2 U A1950 107.408 108.351 116.078 1.00113.26 C
ATOM 16 O2 U A1950 106.783 107.309 115.945 1.00113.78 O
ATOM 17 N3 U A1950 107.219 109.176 117.160 1.00114.48 N
ATOM 18 C4 U A1950 107.857 110.373 117.418 1.00115.01 C
ATOM 19 O4 U A1950 107.566 111.011 118.434 1.00116.14 O
ATOM 20 C5 U A1950 108.825 110.756 116.437 1.00114.14 C
ATOM 21 C6 U A1950 109.037 109.976 115.372 1.00112.82 C
ATOM 22 P G A1951 105.280 108.911 110.835 1.00101.27 P
ATOM 23 OP1 G A1951 104.749 108.081 111.950 1.00101.94 O
ATOM 24 OP2 G A1951 104.855 108.614 109.437 1.00101.16 O
ATOM 25 O5' G A1951 104.944 110.435 111.162 1.00 96.72 O
TER

ATOM 1 O3' U B1950 106.889 108.841 110.861 1.00103.33 O
ATOM 2 P G B1951 105.280 108.911 110.835 1.00101.27 P
ATOM 3 OP1 G B1951 104.749 108.081 111.950 1.00101.94 O
ATOM 4 OP2 G B1951 104.855 108.614 109.437 1.00101.16 O
ATOM 5 O5' G B1951 104.944 110.435 111.162 1.00 96.72 O
ATOM 6 C5' G B1951 105.714 111.500 110.585 1.00 87.92 C
ATOM 7 C4' G B1951 104.978 112.098 109.406 1.00 82.33 C
ATOM 8 O4' G B1951 105.838 113.068 108.759 1.00 79.57 O
ATOM 9 C3' G B1951 104.613 111.116 108.303 1.00 80.09 C
ATOM 10 O3' G B1951 103.536 111.621 107.518 1.00 79.23 O
ATOM 11 C2' G B1951 105.906 111.058 107.502 1.00 78.47 C
ATOM 12 O2' G B1951 105.726 110.644 106.166 1.00 78.93 O
ATOM 13 C1' G B1951 106.400 112.504 107.591 1.00 76.72 C
ATOM 14 N9 G B1951 107.852 112.626 107.693 1.00 72.76 N
ATOM 15 C8 G B1951 108.735 111.691 108.181 1.00 71.59 C
ATOM 16 N7 G B1951 109.979 112.085 108.131 1.00 70.88 N
ATOM 17 C5 G B1951 109.915 113.358 107.582 1.00 69.77 C
ATOM 18 C6 G B1951 110.949 114.280 107.281 1.00 67.89 C
ATOM 19 O6 G B1951 112.164 114.154 107.447 1.00 66.35 O
ATOM 20 N1 G B1951 110.444 115.452 106.729 1.00 68.63 N
ATOM 21 C2 G B1951 109.116 115.708 106.497 1.00 69.15 C
ATOM 22 N2 G B1951 108.830 116.900 105.952 1.00 68.56 N
ATOM 23 N3 G B1951 108.140 114.857 106.776 1.00 69.52 N
ATOM 24 C4 G B1951 108.609 113.710 107.310 1.00 70.76 C
ATOM 25 P C B1952 102.011 111.283 107.918 1.00 79.05 P
ATOM 26 OP1 C B1952 101.160 112.211 107.127 1.00 78.22 O
ATOM 27 OP2 C B1952 101.915 111.286 109.408 1.00 78.58 O
ATOM 28 O5' C B1952 101.746 109.800 107.376 1.00 79.40 O
TER

Atoms:
C4: (107.857,110.373,117.418)
N3: (107.219,109.176,117.160)
OP1: (111.899,110.656,113.428)
OP2: (111.487,112.930,112.303)
C2: (107.408,108.351,116.078)
C1': (108.599,107.977,113.957)
C3': (107.589,109.010,112.091)
O5': (109.666,111.240,112.466)
O4': (109.620,108.590,113.180)
C5': (109.741,110.248,111.422)
P: (110.996,111.804,113.140)
C4': (109.092,108.959,111.874)
C2': (107.371,107.848,113.052)
O2': (107.395,106.584,112.413)
N1: (108.355,108.797,115.158)
O4: (107.566,111.011,118.434)
O2: (106.783,107.309,115.945)
C6: (109.037,109.976,115.372)
C5: (108.825,110.756,116.437)
O3': (106.889,108.841,110.861)
OP1: (104.749,108.081,111.950)
OP2: (104.855,108.614,109.437)
C3': (104.613,111.116,108.303)
C1': (106.400,112.504,107.591)
C5': (105.714,111.500,110.585)
O6: (112.164,114.154,107.447)
O4': (105.838,113.068,108.759)
C8: (108.735,111.691,108.181)
C2: (109.116,115.708,106.497)
C6: (110.949,114.280,107.281)
C5: (109.915,113.358,107.582)
C4: (108.609,113.710,107.310)
P: (105.280,108.911,110.835)
C4': (104.978,112.098,109.406)
C2': (105.906,111.058,107.502)
O2': (105.726,110.644,106.166)
N1: (110.444,115.452,106.729)
N2: (108.830,116.900,105.952)
N3: (108.140,114.857,106.776)
N7: (109.979,112.085,108.131)
N9: (107.852,112.626,107.693)
O5': (104.944,110.435,111.162)
O3': (103.536,111.621,107.518)
Image (generated by PyMOL):
PyMOL image
show in jmol