Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:021:022
Extra
PDB:
ATOM 1 O3' U A 20 32.840 137.907 46.052 1.00 42.75 O
ATOM 2 P C A 21 32.576 138.578 44.620 1.00 41.50 P
ATOM 3 OP1 C A 21 32.120 139.963 44.884 1.00 43.25 O
ATOM 4 OP2 C A 21 31.740 137.674 43.802 1.00 44.40 O
ATOM 5 O5' C A 21 33.992 138.625 43.904 1.00 43.65 O
ATOM 6 C5' C A 21 35.198 138.359 44.618 1.00 47.96 C
ATOM 7 C4' C A 21 36.294 139.262 44.116 1.00 50.34 C
ATOM 8 O4' C A 21 35.853 140.644 44.183 1.00 55.33 O
ATOM 9 C3' C A 21 37.586 139.208 44.909 1.00 49.88 C
ATOM 10 O3' C A 21 38.623 139.578 44.019 1.00 41.34 O
ATOM 11 C2' C A 21 37.366 140.304 45.944 1.00 53.99 C
ATOM 12 O2' C A 21 38.557 140.808 46.507 1.00 55.90 O
ATOM 13 C1' C A 21 36.678 141.361 45.084 1.00 59.38 C
ATOM 14 N1 C A 21 35.844 142.329 45.823 1.00 66.76 N
ATOM 15 C2 C A 21 36.381 143.598 46.131 1.00 70.30 C
ATOM 16 O2 C A 21 37.559 143.859 45.806 1.00 71.54 O
ATOM 17 N3 C A 21 35.606 144.501 46.777 1.00 72.32 N
ATOM 18 C4 C A 21 34.353 144.183 47.121 1.00 72.57 C
ATOM 19 N4 C A 21 33.625 145.110 47.750 1.00 74.20 N
ATOM 20 C5 C A 21 33.791 142.902 46.836 1.00 71.34 C
ATOM 21 C6 C A 21 34.563 142.015 46.195 1.00 68.76 C
ATOM 22 P G A 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 23 OP1 G A 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 24 OP2 G A 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 25 O5' G A 22 40.419 137.967 44.705 1.00 38.92 O
TER
ATOM 1 O3' C B 21 38.623 139.578 44.019 1.00 41.34 O
ATOM 2 P G B 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 3 OP1 G B 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 4 OP2 G B 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 5 O5' G B 22 40.419 137.967 44.705 1.00 38.92 O
ATOM 6 C5' G B 22 41.138 138.881 45.537 1.00 34.48 C
ATOM 7 C4' G B 22 41.684 138.143 46.725 1.00 35.45 C
ATOM 8 O4' G B 22 40.575 137.680 47.543 1.00 37.27 O
ATOM 9 C3' G B 22 42.445 136.872 46.382 1.00 34.83 C
ATOM 10 O3' G B 22 43.790 137.159 46.018 1.00 33.11 O
ATOM 11 C2' G B 22 42.315 136.075 47.671 1.00 35.38 C
ATOM 12 O2' G B 22 43.177 136.569 48.668 1.00 37.01 O
ATOM 13 C1' G B 22 40.875 136.402 48.079 1.00 36.84 C
ATOM 14 N9 G B 22 39.893 135.445 47.572 1.00 38.81 N
ATOM 15 C8 G B 22 39.132 135.555 46.434 1.00 38.67 C
ATOM 16 N7 G B 22 38.363 134.521 46.226 1.00 41.80 N
ATOM 17 C5 G B 22 38.623 133.678 47.297 1.00 41.54 C
ATOM 18 C6 G B 22 38.087 132.399 47.618 1.00 42.04 C
ATOM 19 O6 G B 22 37.245 131.735 47.002 1.00 40.02 O
ATOM 20 N1 G B 22 38.634 131.897 48.796 1.00 42.50 N
ATOM 21 C2 G B 22 39.570 132.537 49.569 1.00 41.87 C
ATOM 22 N2 G B 22 39.982 131.884 50.661 1.00 41.76 N
ATOM 23 N3 G B 22 40.070 133.728 49.288 1.00 42.98 N
ATOM 24 C4 G B 22 39.558 134.236 48.143 1.00 42.10 C
ATOM 25 P G B 23 44.722 135.999 45.419 1.00 33.52 P
ATOM 26 OP1 G B 23 46.025 136.590 45.069 1.00 31.19 O
ATOM 27 OP2 G B 23 43.952 135.273 44.382 1.00 33.80 O
ATOM 28 O5' G B 23 44.943 135.040 46.674 1.00 34.64 O
TER
ATOM 2 P C A 21 32.576 138.578 44.620 1.00 41.50 P
ATOM 3 OP1 C A 21 32.120 139.963 44.884 1.00 43.25 O
ATOM 4 OP2 C A 21 31.740 137.674 43.802 1.00 44.40 O
ATOM 5 O5' C A 21 33.992 138.625 43.904 1.00 43.65 O
ATOM 6 C5' C A 21 35.198 138.359 44.618 1.00 47.96 C
ATOM 7 C4' C A 21 36.294 139.262 44.116 1.00 50.34 C
ATOM 8 O4' C A 21 35.853 140.644 44.183 1.00 55.33 O
ATOM 9 C3' C A 21 37.586 139.208 44.909 1.00 49.88 C
ATOM 10 O3' C A 21 38.623 139.578 44.019 1.00 41.34 O
ATOM 11 C2' C A 21 37.366 140.304 45.944 1.00 53.99 C
ATOM 12 O2' C A 21 38.557 140.808 46.507 1.00 55.90 O
ATOM 13 C1' C A 21 36.678 141.361 45.084 1.00 59.38 C
ATOM 14 N1 C A 21 35.844 142.329 45.823 1.00 66.76 N
ATOM 15 C2 C A 21 36.381 143.598 46.131 1.00 70.30 C
ATOM 16 O2 C A 21 37.559 143.859 45.806 1.00 71.54 O
ATOM 17 N3 C A 21 35.606 144.501 46.777 1.00 72.32 N
ATOM 18 C4 C A 21 34.353 144.183 47.121 1.00 72.57 C
ATOM 19 N4 C A 21 33.625 145.110 47.750 1.00 74.20 N
ATOM 20 C5 C A 21 33.791 142.902 46.836 1.00 71.34 C
ATOM 21 C6 C A 21 34.563 142.015 46.195 1.00 68.76 C
ATOM 22 P G A 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 23 OP1 G A 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 24 OP2 G A 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 25 O5' G A 22 40.419 137.967 44.705 1.00 38.92 O
TER
ATOM 1 O3' C B 21 38.623 139.578 44.019 1.00 41.34 O
ATOM 2 P G B 22 39.607 138.463 43.438 1.00 38.02 P
ATOM 3 OP1 G B 22 40.546 139.144 42.519 1.00 39.44 O
ATOM 4 OP2 G B 22 38.819 137.301 42.961 1.00 39.94 O
ATOM 5 O5' G B 22 40.419 137.967 44.705 1.00 38.92 O
ATOM 6 C5' G B 22 41.138 138.881 45.537 1.00 34.48 C
ATOM 7 C4' G B 22 41.684 138.143 46.725 1.00 35.45 C
ATOM 8 O4' G B 22 40.575 137.680 47.543 1.00 37.27 O
ATOM 9 C3' G B 22 42.445 136.872 46.382 1.00 34.83 C
ATOM 10 O3' G B 22 43.790 137.159 46.018 1.00 33.11 O
ATOM 11 C2' G B 22 42.315 136.075 47.671 1.00 35.38 C
ATOM 12 O2' G B 22 43.177 136.569 48.668 1.00 37.01 O
ATOM 13 C1' G B 22 40.875 136.402 48.079 1.00 36.84 C
ATOM 14 N9 G B 22 39.893 135.445 47.572 1.00 38.81 N
ATOM 15 C8 G B 22 39.132 135.555 46.434 1.00 38.67 C
ATOM 16 N7 G B 22 38.363 134.521 46.226 1.00 41.80 N
ATOM 17 C5 G B 22 38.623 133.678 47.297 1.00 41.54 C
ATOM 18 C6 G B 22 38.087 132.399 47.618 1.00 42.04 C
ATOM 19 O6 G B 22 37.245 131.735 47.002 1.00 40.02 O
ATOM 20 N1 G B 22 38.634 131.897 48.796 1.00 42.50 N
ATOM 21 C2 G B 22 39.570 132.537 49.569 1.00 41.87 C
ATOM 22 N2 G B 22 39.982 131.884 50.661 1.00 41.76 N
ATOM 23 N3 G B 22 40.070 133.728 49.288 1.00 42.98 N
ATOM 24 C4 G B 22 39.558 134.236 48.143 1.00 42.10 C
ATOM 25 P G B 23 44.722 135.999 45.419 1.00 33.52 P
ATOM 26 OP1 G B 23 46.025 136.590 45.069 1.00 31.19 O
ATOM 27 OP2 G B 23 43.952 135.273 44.382 1.00 33.80 O
ATOM 28 O5' G B 23 44.943 135.040 46.674 1.00 34.64 O
TER
Atoms:
C2: (36.381,143.598,46.131)
OP1: (32.120,139.963,44.884)
OP2: (31.740,137.674,43.802)
C4: (34.353,144.183,47.121)
O5': (33.992,138.625,43.904)
C3': (37.586,139.208,44.909)
C1': (36.678,141.361,45.084)
O4': (35.853,140.644,44.183)
C5': (35.198,138.359,44.618)
P: (32.576,138.578,44.620)
O2: (37.559,143.859,45.806)
C4': (36.294,139.262,44.116)
C2': (37.366,140.304,45.944)
O2': (38.557,140.808,46.507)
N1: (35.844,142.329,45.823)
N3: (35.606,144.501,46.777)
N4: (33.625,145.110,47.750)
C6: (34.563,142.015,46.195)
C5: (33.791,142.902,46.836)
O3': (38.623,139.578,44.019)
OP1: (32.120,139.963,44.884)
OP2: (31.740,137.674,43.802)
C4: (34.353,144.183,47.121)
O5': (33.992,138.625,43.904)
C3': (37.586,139.208,44.909)
C1': (36.678,141.361,45.084)
O4': (35.853,140.644,44.183)
C5': (35.198,138.359,44.618)
P: (32.576,138.578,44.620)
O2: (37.559,143.859,45.806)
C4': (36.294,139.262,44.116)
C2': (37.366,140.304,45.944)
O2': (38.557,140.808,46.507)
N1: (35.844,142.329,45.823)
N3: (35.606,144.501,46.777)
N4: (33.625,145.110,47.750)
C6: (34.563,142.015,46.195)
C5: (33.791,142.902,46.836)
O3': (38.623,139.578,44.019)
OP1: (40.546,139.144,42.519)
OP2: (38.819,137.301,42.961)
C3': (42.445,136.872,46.382)
C1': (40.875,136.402,48.079)
C5': (41.138,138.881,45.537)
O6: (37.245,131.735,47.002)
O4': (40.575,137.680,47.543)
C8: (39.132,135.555,46.434)
C2: (39.570,132.537,49.569)
C6: (38.087,132.399,47.618)
C5: (38.623,133.678,47.297)
C4: (39.558,134.236,48.143)
P: (39.607,138.463,43.438)
C4': (41.684,138.143,46.725)
C2': (42.315,136.075,47.671)
O2': (43.177,136.569,48.668)
N1: (38.634,131.897,48.796)
N2: (39.982,131.884,50.661)
N3: (40.070,133.728,49.288)
N7: (38.363,134.521,46.226)
N9: (39.893,135.445,47.572)
O5': (40.419,137.967,44.705)
O3': (43.790,137.159,46.018)
OP2: (38.819,137.301,42.961)
C3': (42.445,136.872,46.382)
C1': (40.875,136.402,48.079)
C5': (41.138,138.881,45.537)
O6: (37.245,131.735,47.002)
O4': (40.575,137.680,47.543)
C8: (39.132,135.555,46.434)
C2: (39.570,132.537,49.569)
C6: (38.087,132.399,47.618)
C5: (38.623,133.678,47.297)
C4: (39.558,134.236,48.143)
P: (39.607,138.463,43.438)
C4': (41.684,138.143,46.725)
C2': (42.315,136.075,47.671)
O2': (43.177,136.569,48.668)
N1: (38.634,131.897,48.796)
N2: (39.982,131.884,50.661)
N3: (40.070,133.728,49.288)
N7: (38.363,134.521,46.226)
N9: (39.893,135.445,47.572)
O5': (40.419,137.967,44.705)
O3': (43.790,137.159,46.018)
Image (generated by PyMOL):