Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:021:022
Extra
PDB:
ATOM 1 O3' U A 20 32.936 137.739 46.090 1.00 37.69 O
ATOM 2 P C A 21 32.662 138.428 44.670 1.00 39.47 P
ATOM 3 OP1 C A 21 32.169 139.803 44.951 1.00 40.84 O
ATOM 4 OP2 C A 21 31.855 137.522 43.821 1.00 41.04 O
ATOM 5 O5' C A 21 34.090 138.520 43.977 1.00 41.00 O
ATOM 6 C5' C A 21 35.295 138.262 44.706 1.00 44.04 C
ATOM 7 C4' C A 21 36.403 139.129 44.170 1.00 46.98 C
ATOM 8 O4' C A 21 35.992 140.519 44.231 1.00 51.83 O
ATOM 9 C3' C A 21 37.720 139.059 44.922 1.00 46.68 C
ATOM 10 O3' C A 21 38.741 139.389 43.998 1.00 40.08 O
ATOM 11 C2' C A 21 37.568 140.181 45.940 1.00 50.71 C
ATOM 12 O2' C A 21 38.800 140.669 46.424 1.00 51.54 O
ATOM 13 C1' C A 21 36.860 141.235 45.093 1.00 55.08 C
ATOM 14 N1 C A 21 36.060 142.222 45.846 1.00 61.62 N
ATOM 15 C2 C A 21 36.564 143.531 46.008 1.00 64.16 C
ATOM 16 O2 C A 21 37.688 143.815 45.551 1.00 64.87 O
ATOM 17 N3 C A 21 35.811 144.449 46.659 1.00 66.05 N
ATOM 18 C4 C A 21 34.613 144.109 47.144 1.00 66.90 C
ATOM 19 N4 C A 21 33.901 145.054 47.764 1.00 68.97 N
ATOM 20 C5 C A 21 34.089 142.786 47.013 1.00 65.93 C
ATOM 21 C6 C A 21 34.838 141.884 46.367 1.00 63.62 C
ATOM 22 P G A 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 23 OP1 G A 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 24 OP2 G A 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 25 O5' G A 22 40.509 137.771 44.718 1.00 36.97 O
TER
ATOM 1 O3' C B 21 38.741 139.389 43.998 1.00 40.08 O
ATOM 2 P G B 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 3 OP1 G B 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 4 OP2 G B 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 5 O5' G B 22 40.509 137.771 44.718 1.00 36.97 O
ATOM 6 C5' G B 22 41.288 138.688 45.487 1.00 33.91 C
ATOM 7 C4' G B 22 41.846 137.974 46.681 1.00 33.93 C
ATOM 8 O4' G B 22 40.736 137.542 47.509 1.00 37.37 O
ATOM 9 C3' G B 22 42.596 136.690 46.358 1.00 32.44 C
ATOM 10 O3' G B 22 43.947 136.958 46.008 1.00 29.85 O
ATOM 11 C2' G B 22 42.456 135.914 47.657 1.00 34.82 C
ATOM 12 O2' G B 22 43.331 136.415 48.645 1.00 35.32 O
ATOM 13 C1' G B 22 41.017 136.263 48.056 1.00 37.94 C
ATOM 14 N9 G B 22 40.017 135.314 47.562 1.00 40.63 N
ATOM 15 C8 G B 22 39.235 135.426 46.435 1.00 40.40 C
ATOM 16 N7 G B 22 38.460 134.394 46.243 1.00 42.62 N
ATOM 17 C5 G B 22 38.740 133.551 47.311 1.00 45.06 C
ATOM 18 C6 G B 22 38.212 132.269 47.648 1.00 46.06 C
ATOM 19 O6 G B 22 37.368 131.592 47.046 1.00 45.33 O
ATOM 20 N1 G B 22 38.774 131.782 48.823 1.00 47.03 N
ATOM 21 C2 G B 22 39.716 132.429 49.579 1.00 45.54 C
ATOM 22 N2 G B 22 40.131 131.798 50.677 1.00 46.92 N
ATOM 23 N3 G B 22 40.215 133.611 49.279 1.00 46.87 N
ATOM 24 C4 G B 22 39.690 134.111 48.139 1.00 44.56 C
ATOM 25 P G B 23 44.877 135.779 45.444 1.00 32.36 P
ATOM 26 OP1 G B 23 46.230 136.317 45.194 1.00 28.97 O
ATOM 27 OP2 G B 23 44.153 135.071 44.351 1.00 30.52 O
ATOM 28 O5' G B 23 45.007 134.809 46.697 1.00 33.80 O
TER
ATOM 2 P C A 21 32.662 138.428 44.670 1.00 39.47 P
ATOM 3 OP1 C A 21 32.169 139.803 44.951 1.00 40.84 O
ATOM 4 OP2 C A 21 31.855 137.522 43.821 1.00 41.04 O
ATOM 5 O5' C A 21 34.090 138.520 43.977 1.00 41.00 O
ATOM 6 C5' C A 21 35.295 138.262 44.706 1.00 44.04 C
ATOM 7 C4' C A 21 36.403 139.129 44.170 1.00 46.98 C
ATOM 8 O4' C A 21 35.992 140.519 44.231 1.00 51.83 O
ATOM 9 C3' C A 21 37.720 139.059 44.922 1.00 46.68 C
ATOM 10 O3' C A 21 38.741 139.389 43.998 1.00 40.08 O
ATOM 11 C2' C A 21 37.568 140.181 45.940 1.00 50.71 C
ATOM 12 O2' C A 21 38.800 140.669 46.424 1.00 51.54 O
ATOM 13 C1' C A 21 36.860 141.235 45.093 1.00 55.08 C
ATOM 14 N1 C A 21 36.060 142.222 45.846 1.00 61.62 N
ATOM 15 C2 C A 21 36.564 143.531 46.008 1.00 64.16 C
ATOM 16 O2 C A 21 37.688 143.815 45.551 1.00 64.87 O
ATOM 17 N3 C A 21 35.811 144.449 46.659 1.00 66.05 N
ATOM 18 C4 C A 21 34.613 144.109 47.144 1.00 66.90 C
ATOM 19 N4 C A 21 33.901 145.054 47.764 1.00 68.97 N
ATOM 20 C5 C A 21 34.089 142.786 47.013 1.00 65.93 C
ATOM 21 C6 C A 21 34.838 141.884 46.367 1.00 63.62 C
ATOM 22 P G A 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 23 OP1 G A 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 24 OP2 G A 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 25 O5' G A 22 40.509 137.771 44.718 1.00 36.97 O
TER
ATOM 1 O3' C B 21 38.741 139.389 43.998 1.00 40.08 O
ATOM 2 P G B 22 39.703 138.245 43.443 1.00 36.80 P
ATOM 3 OP1 G B 22 40.660 138.875 42.508 1.00 39.09 O
ATOM 4 OP2 G B 22 38.875 137.102 42.997 1.00 37.92 O
ATOM 5 O5' G B 22 40.509 137.771 44.718 1.00 36.97 O
ATOM 6 C5' G B 22 41.288 138.688 45.487 1.00 33.91 C
ATOM 7 C4' G B 22 41.846 137.974 46.681 1.00 33.93 C
ATOM 8 O4' G B 22 40.736 137.542 47.509 1.00 37.37 O
ATOM 9 C3' G B 22 42.596 136.690 46.358 1.00 32.44 C
ATOM 10 O3' G B 22 43.947 136.958 46.008 1.00 29.85 O
ATOM 11 C2' G B 22 42.456 135.914 47.657 1.00 34.82 C
ATOM 12 O2' G B 22 43.331 136.415 48.645 1.00 35.32 O
ATOM 13 C1' G B 22 41.017 136.263 48.056 1.00 37.94 C
ATOM 14 N9 G B 22 40.017 135.314 47.562 1.00 40.63 N
ATOM 15 C8 G B 22 39.235 135.426 46.435 1.00 40.40 C
ATOM 16 N7 G B 22 38.460 134.394 46.243 1.00 42.62 N
ATOM 17 C5 G B 22 38.740 133.551 47.311 1.00 45.06 C
ATOM 18 C6 G B 22 38.212 132.269 47.648 1.00 46.06 C
ATOM 19 O6 G B 22 37.368 131.592 47.046 1.00 45.33 O
ATOM 20 N1 G B 22 38.774 131.782 48.823 1.00 47.03 N
ATOM 21 C2 G B 22 39.716 132.429 49.579 1.00 45.54 C
ATOM 22 N2 G B 22 40.131 131.798 50.677 1.00 46.92 N
ATOM 23 N3 G B 22 40.215 133.611 49.279 1.00 46.87 N
ATOM 24 C4 G B 22 39.690 134.111 48.139 1.00 44.56 C
ATOM 25 P G B 23 44.877 135.779 45.444 1.00 32.36 P
ATOM 26 OP1 G B 23 46.230 136.317 45.194 1.00 28.97 O
ATOM 27 OP2 G B 23 44.153 135.071 44.351 1.00 30.52 O
ATOM 28 O5' G B 23 45.007 134.809 46.697 1.00 33.80 O
TER
Atoms:
C2: (36.564,143.531,46.008)
OP1: (32.169,139.803,44.951)
OP2: (31.855,137.522,43.821)
C4: (34.613,144.109,47.144)
O5': (34.090,138.520,43.977)
C3': (37.720,139.059,44.922)
C1': (36.860,141.235,45.093)
O4': (35.992,140.519,44.231)
C5': (35.295,138.262,44.706)
P: (32.662,138.428,44.670)
O2: (37.688,143.815,45.551)
C4': (36.403,139.129,44.170)
C2': (37.568,140.181,45.940)
O2': (38.800,140.669,46.424)
N1: (36.060,142.222,45.846)
N3: (35.811,144.449,46.659)
N4: (33.901,145.054,47.764)
C6: (34.838,141.884,46.367)
C5: (34.089,142.786,47.013)
O3': (38.741,139.389,43.998)
OP1: (32.169,139.803,44.951)
OP2: (31.855,137.522,43.821)
C4: (34.613,144.109,47.144)
O5': (34.090,138.520,43.977)
C3': (37.720,139.059,44.922)
C1': (36.860,141.235,45.093)
O4': (35.992,140.519,44.231)
C5': (35.295,138.262,44.706)
P: (32.662,138.428,44.670)
O2: (37.688,143.815,45.551)
C4': (36.403,139.129,44.170)
C2': (37.568,140.181,45.940)
O2': (38.800,140.669,46.424)
N1: (36.060,142.222,45.846)
N3: (35.811,144.449,46.659)
N4: (33.901,145.054,47.764)
C6: (34.838,141.884,46.367)
C5: (34.089,142.786,47.013)
O3': (38.741,139.389,43.998)
OP1: (40.660,138.875,42.508)
OP2: (38.875,137.102,42.997)
C3': (42.596,136.690,46.358)
C1': (41.017,136.263,48.056)
C5': (41.288,138.688,45.487)
O6: (37.368,131.592,47.046)
O4': (40.736,137.542,47.509)
C8: (39.235,135.426,46.435)
C2: (39.716,132.429,49.579)
C6: (38.212,132.269,47.648)
C5: (38.740,133.551,47.311)
C4: (39.690,134.111,48.139)
P: (39.703,138.245,43.443)
C4': (41.846,137.974,46.681)
C2': (42.456,135.914,47.657)
O2': (43.331,136.415,48.645)
N1: (38.774,131.782,48.823)
N2: (40.131,131.798,50.677)
N3: (40.215,133.611,49.279)
N7: (38.460,134.394,46.243)
N9: (40.017,135.314,47.562)
O5': (40.509,137.771,44.718)
O3': (43.947,136.958,46.008)
OP2: (38.875,137.102,42.997)
C3': (42.596,136.690,46.358)
C1': (41.017,136.263,48.056)
C5': (41.288,138.688,45.487)
O6: (37.368,131.592,47.046)
O4': (40.736,137.542,47.509)
C8: (39.235,135.426,46.435)
C2: (39.716,132.429,49.579)
C6: (38.212,132.269,47.648)
C5: (38.740,133.551,47.311)
C4: (39.690,134.111,48.139)
P: (39.703,138.245,43.443)
C4': (41.846,137.974,46.681)
C2': (42.456,135.914,47.657)
O2': (43.331,136.415,48.645)
N1: (38.774,131.782,48.823)
N2: (40.131,131.798,50.677)
N3: (40.215,133.611,49.279)
N7: (38.460,134.394,46.243)
N9: (40.017,135.314,47.562)
O5': (40.509,137.771,44.718)
O3': (43.947,136.958,46.008)
Image (generated by PyMOL):