Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:021:022
Extra
PDB:
ATOM 1 O3' U A 20 32.851 137.904 45.966 1.00 44.23 O
ATOM 2 P C A 21 32.593 138.485 44.500 1.00 45.70 P
ATOM 3 OP1 C A 21 31.768 139.707 44.669 1.00 45.54 O
ATOM 4 OP2 C A 21 32.113 137.381 43.634 1.00 44.99 O
ATOM 5 O5' C A 21 34.024 138.912 43.962 1.00 47.82 O
ATOM 6 C5' C A 21 35.229 138.414 44.554 1.00 50.96 C
ATOM 7 C4' C A 21 36.386 139.276 44.125 1.00 52.82 C
ATOM 8 O4' C A 21 35.984 140.667 44.182 1.00 57.38 O
ATOM 9 C3' C A 21 37.643 139.179 44.970 1.00 51.75 C
ATOM 10 O3' C A 21 38.716 139.566 44.128 1.00 45.85 O
ATOM 11 C2' C A 21 37.404 140.273 46.004 1.00 55.59 C
ATOM 12 O2' C A 21 38.586 140.766 46.588 1.00 57.93 O
ATOM 13 C1' C A 21 36.788 141.352 45.120 1.00 60.86 C
ATOM 14 N1 C A 21 35.960 142.365 45.797 1.00 67.59 N
ATOM 15 C2 C A 21 36.468 143.675 45.938 1.00 70.31 C
ATOM 16 O2 C A 21 37.622 143.929 45.543 1.00 70.48 O
ATOM 17 N3 C A 21 35.688 144.625 46.504 1.00 73.08 N
ATOM 18 C4 C A 21 34.460 144.316 46.930 1.00 74.15 C
ATOM 19 N4 C A 21 33.723 145.295 47.467 1.00 76.21 N
ATOM 20 C5 C A 21 33.930 142.993 46.823 1.00 73.03 C
ATOM 21 C6 C A 21 34.708 142.058 46.260 1.00 70.51 C
ATOM 22 P G A 22 39.628 138.454 43.435 1.00 42.93 P
ATOM 23 OP1 G A 22 40.506 139.135 42.459 1.00 43.61 O
ATOM 24 OP2 G A 22 38.776 137.320 42.997 1.00 42.18 O
ATOM 25 O5' G A 22 40.544 137.933 44.616 1.00 42.10 O
TER
ATOM 1 O3' C B 21 38.716 139.566 44.128 1.00 45.85 O
ATOM 2 P G B 22 39.628 138.454 43.435 1.00 42.93 P
ATOM 3 OP1 G B 22 40.506 139.135 42.459 1.00 43.61 O
ATOM 4 OP2 G B 22 38.776 137.320 42.997 1.00 42.18 O
ATOM 5 O5' G B 22 40.544 137.933 44.616 1.00 42.10 O
ATOM 6 C5' G B 22 41.251 138.838 45.467 1.00 39.17 C
ATOM 7 C4' G B 22 41.748 138.093 46.672 1.00 39.16 C
ATOM 8 O4' G B 22 40.609 137.630 47.443 1.00 41.12 O
ATOM 9 C3' G B 22 42.504 136.818 46.341 1.00 38.52 C
ATOM 10 O3' G B 22 43.854 137.107 46.025 1.00 36.87 O
ATOM 11 C2' G B 22 42.330 135.996 47.610 1.00 40.60 C
ATOM 12 O2' G B 22 43.199 136.403 48.647 1.00 41.49 O
ATOM 13 C1' G B 22 40.892 136.356 48.000 1.00 42.92 C
ATOM 14 N9 G B 22 39.895 135.392 47.532 1.00 44.96 N
ATOM 15 C8 G B 22 39.101 135.469 46.411 1.00 45.15 C
ATOM 16 N7 G B 22 38.348 134.415 46.241 1.00 46.40 N
ATOM 17 C5 G B 22 38.651 133.598 47.321 1.00 47.90 C
ATOM 18 C6 G B 22 38.157 132.309 47.680 1.00 47.41 C
ATOM 19 O6 G B 22 37.319 131.614 47.102 1.00 45.44 O
ATOM 20 N1 G B 22 38.747 131.847 48.855 1.00 48.49 N
ATOM 21 C2 G B 22 39.679 132.531 49.599 1.00 47.86 C
ATOM 22 N2 G B 22 40.133 131.924 50.700 1.00 46.48 N
ATOM 23 N3 G B 22 40.136 133.727 49.283 1.00 48.88 N
ATOM 24 C4 G B 22 39.591 134.195 48.136 1.00 47.70 C
ATOM 25 P G B 23 44.794 135.960 45.434 1.00 37.05 P
ATOM 26 OP1 G B 23 46.096 136.565 45.116 1.00 35.90 O
ATOM 27 OP2 G B 23 44.054 135.219 44.388 1.00 35.20 O
ATOM 28 O5' G B 23 45.013 135.008 46.684 1.00 37.80 O
TER
ATOM 2 P C A 21 32.593 138.485 44.500 1.00 45.70 P
ATOM 3 OP1 C A 21 31.768 139.707 44.669 1.00 45.54 O
ATOM 4 OP2 C A 21 32.113 137.381 43.634 1.00 44.99 O
ATOM 5 O5' C A 21 34.024 138.912 43.962 1.00 47.82 O
ATOM 6 C5' C A 21 35.229 138.414 44.554 1.00 50.96 C
ATOM 7 C4' C A 21 36.386 139.276 44.125 1.00 52.82 C
ATOM 8 O4' C A 21 35.984 140.667 44.182 1.00 57.38 O
ATOM 9 C3' C A 21 37.643 139.179 44.970 1.00 51.75 C
ATOM 10 O3' C A 21 38.716 139.566 44.128 1.00 45.85 O
ATOM 11 C2' C A 21 37.404 140.273 46.004 1.00 55.59 C
ATOM 12 O2' C A 21 38.586 140.766 46.588 1.00 57.93 O
ATOM 13 C1' C A 21 36.788 141.352 45.120 1.00 60.86 C
ATOM 14 N1 C A 21 35.960 142.365 45.797 1.00 67.59 N
ATOM 15 C2 C A 21 36.468 143.675 45.938 1.00 70.31 C
ATOM 16 O2 C A 21 37.622 143.929 45.543 1.00 70.48 O
ATOM 17 N3 C A 21 35.688 144.625 46.504 1.00 73.08 N
ATOM 18 C4 C A 21 34.460 144.316 46.930 1.00 74.15 C
ATOM 19 N4 C A 21 33.723 145.295 47.467 1.00 76.21 N
ATOM 20 C5 C A 21 33.930 142.993 46.823 1.00 73.03 C
ATOM 21 C6 C A 21 34.708 142.058 46.260 1.00 70.51 C
ATOM 22 P G A 22 39.628 138.454 43.435 1.00 42.93 P
ATOM 23 OP1 G A 22 40.506 139.135 42.459 1.00 43.61 O
ATOM 24 OP2 G A 22 38.776 137.320 42.997 1.00 42.18 O
ATOM 25 O5' G A 22 40.544 137.933 44.616 1.00 42.10 O
TER
ATOM 1 O3' C B 21 38.716 139.566 44.128 1.00 45.85 O
ATOM 2 P G B 22 39.628 138.454 43.435 1.00 42.93 P
ATOM 3 OP1 G B 22 40.506 139.135 42.459 1.00 43.61 O
ATOM 4 OP2 G B 22 38.776 137.320 42.997 1.00 42.18 O
ATOM 5 O5' G B 22 40.544 137.933 44.616 1.00 42.10 O
ATOM 6 C5' G B 22 41.251 138.838 45.467 1.00 39.17 C
ATOM 7 C4' G B 22 41.748 138.093 46.672 1.00 39.16 C
ATOM 8 O4' G B 22 40.609 137.630 47.443 1.00 41.12 O
ATOM 9 C3' G B 22 42.504 136.818 46.341 1.00 38.52 C
ATOM 10 O3' G B 22 43.854 137.107 46.025 1.00 36.87 O
ATOM 11 C2' G B 22 42.330 135.996 47.610 1.00 40.60 C
ATOM 12 O2' G B 22 43.199 136.403 48.647 1.00 41.49 O
ATOM 13 C1' G B 22 40.892 136.356 48.000 1.00 42.92 C
ATOM 14 N9 G B 22 39.895 135.392 47.532 1.00 44.96 N
ATOM 15 C8 G B 22 39.101 135.469 46.411 1.00 45.15 C
ATOM 16 N7 G B 22 38.348 134.415 46.241 1.00 46.40 N
ATOM 17 C5 G B 22 38.651 133.598 47.321 1.00 47.90 C
ATOM 18 C6 G B 22 38.157 132.309 47.680 1.00 47.41 C
ATOM 19 O6 G B 22 37.319 131.614 47.102 1.00 45.44 O
ATOM 20 N1 G B 22 38.747 131.847 48.855 1.00 48.49 N
ATOM 21 C2 G B 22 39.679 132.531 49.599 1.00 47.86 C
ATOM 22 N2 G B 22 40.133 131.924 50.700 1.00 46.48 N
ATOM 23 N3 G B 22 40.136 133.727 49.283 1.00 48.88 N
ATOM 24 C4 G B 22 39.591 134.195 48.136 1.00 47.70 C
ATOM 25 P G B 23 44.794 135.960 45.434 1.00 37.05 P
ATOM 26 OP1 G B 23 46.096 136.565 45.116 1.00 35.90 O
ATOM 27 OP2 G B 23 44.054 135.219 44.388 1.00 35.20 O
ATOM 28 O5' G B 23 45.013 135.008 46.684 1.00 37.80 O
TER
Atoms:
C2: (36.468,143.675,45.938)
OP1: (31.768,139.707,44.669)
OP2: (32.113,137.381,43.634)
C4: (34.460,144.316,46.930)
O5': (34.024,138.912,43.962)
C3': (37.643,139.179,44.970)
C1': (36.788,141.352,45.120)
O4': (35.984,140.667,44.182)
C5': (35.229,138.414,44.554)
P: (32.593,138.485,44.500)
O2: (37.622,143.929,45.543)
C4': (36.386,139.276,44.125)
C2': (37.404,140.273,46.004)
O2': (38.586,140.766,46.588)
N1: (35.960,142.365,45.797)
N3: (35.688,144.625,46.504)
N4: (33.723,145.295,47.467)
C6: (34.708,142.058,46.260)
C5: (33.930,142.993,46.823)
O3': (38.716,139.566,44.128)
OP1: (31.768,139.707,44.669)
OP2: (32.113,137.381,43.634)
C4: (34.460,144.316,46.930)
O5': (34.024,138.912,43.962)
C3': (37.643,139.179,44.970)
C1': (36.788,141.352,45.120)
O4': (35.984,140.667,44.182)
C5': (35.229,138.414,44.554)
P: (32.593,138.485,44.500)
O2: (37.622,143.929,45.543)
C4': (36.386,139.276,44.125)
C2': (37.404,140.273,46.004)
O2': (38.586,140.766,46.588)
N1: (35.960,142.365,45.797)
N3: (35.688,144.625,46.504)
N4: (33.723,145.295,47.467)
C6: (34.708,142.058,46.260)
C5: (33.930,142.993,46.823)
O3': (38.716,139.566,44.128)
OP1: (40.506,139.135,42.459)
OP2: (38.776,137.320,42.997)
C3': (42.504,136.818,46.341)
C1': (40.892,136.356,48.000)
C5': (41.251,138.838,45.467)
O6: (37.319,131.614,47.102)
O4': (40.609,137.630,47.443)
C8: (39.101,135.469,46.411)
C2: (39.679,132.531,49.599)
C6: (38.157,132.309,47.680)
C5: (38.651,133.598,47.321)
C4: (39.591,134.195,48.136)
P: (39.628,138.454,43.435)
C4': (41.748,138.093,46.672)
C2': (42.330,135.996,47.610)
O2': (43.199,136.403,48.647)
N1: (38.747,131.847,48.855)
N2: (40.133,131.924,50.700)
N3: (40.136,133.727,49.283)
N7: (38.348,134.415,46.241)
N9: (39.895,135.392,47.532)
O5': (40.544,137.933,44.616)
O3': (43.854,137.107,46.025)
OP2: (38.776,137.320,42.997)
C3': (42.504,136.818,46.341)
C1': (40.892,136.356,48.000)
C5': (41.251,138.838,45.467)
O6: (37.319,131.614,47.102)
O4': (40.609,137.630,47.443)
C8: (39.101,135.469,46.411)
C2: (39.679,132.531,49.599)
C6: (38.157,132.309,47.680)
C5: (38.651,133.598,47.321)
C4: (39.591,134.195,48.136)
P: (39.628,138.454,43.435)
C4': (41.748,138.093,46.672)
C2': (42.330,135.996,47.610)
O2': (43.199,136.403,48.647)
N1: (38.747,131.847,48.855)
N2: (40.133,131.924,50.700)
N3: (40.136,133.727,49.283)
N7: (38.348,134.415,46.241)
N9: (39.895,135.392,47.532)
O5': (40.544,137.933,44.616)
O3': (43.854,137.107,46.025)
Image (generated by PyMOL):