Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:9107:972
Extra
PDB:
ATOM 1 O3' C A 106 52.660 49.576 131.184 1.00 80.03 O
ATOM 2 P C A 107 52.577 47.985 130.940 1.00 81.20 P
ATOM 3 OP1 C A 107 53.245 47.354 132.111 1.00 80.19 O
ATOM 4 OP2 C A 107 53.027 47.638 129.568 1.00 79.03 O
ATOM 5 O5' C A 107 51.016 47.685 131.006 1.00 79.46 O
ATOM 6 C5' C A 107 50.300 47.819 132.240 1.00 78.73 C
ATOM 7 C4' C A 107 48.857 47.445 132.047 1.00 79.07 C
ATOM 8 O4' C A 107 48.190 48.459 131.247 1.00 79.61 O
ATOM 9 C3' C A 107 48.620 46.175 131.256 1.00 79.57 C
ATOM 10 O3' C A 107 48.843 44.984 131.987 1.00 79.08 O
ATOM 11 C2' C A 107 47.183 46.361 130.796 1.00 79.99 C
ATOM 12 O2' C A 107 46.228 46.112 131.808 1.00 80.42 O
ATOM 13 C1' C A 107 47.195 47.846 130.436 1.00 80.16 C
ATOM 14 N1 C A 107 47.559 48.030 129.017 1.00 80.91 N
ATOM 15 C2 C A 107 46.533 48.119 128.064 1.00 80.96 C
ATOM 16 O2 C A 107 45.348 48.078 128.444 1.00 80.24 O
ATOM 17 N3 C A 107 46.858 48.241 126.756 1.00 80.91 N
ATOM 18 C4 C A 107 48.138 48.268 126.383 1.00 80.57 C
ATOM 19 N4 C A 107 48.405 48.352 125.079 1.00 79.95 N
ATOM 20 C5 C A 107 49.200 48.202 127.331 1.00 81.07 C
ATOM 21 C6 C A 107 48.870 48.088 128.624 1.00 80.73 C
ATOM 22 P G A 108 49.315 43.666 131.200 1.00 79.64 P
ATOM 23 OP1 G A 108 49.624 42.631 132.212 1.00 81.19 O
ATOM 24 OP2 G A 108 50.355 44.064 130.220 1.00 80.35 O
ATOM 25 O5' G A 108 48.013 43.215 130.395 1.00 80.59 O
TER
ATOM 1 O3' C B 71 39.381 47.683 117.386 1.00 89.33 O
ATOM 2 P A B 72 39.162 48.915 118.405 1.00 90.33 P
ATOM 3 OP1 A B 72 37.792 49.455 118.183 1.00 90.55 O
ATOM 4 OP2 A B 72 40.334 49.822 118.302 1.00 90.18 O
ATOM 5 O5' A B 72 39.204 48.240 119.849 1.00 89.70 O
ATOM 6 C5' A B 72 38.176 47.321 120.270 1.00 87.90 C
ATOM 7 C4' A B 72 38.294 47.047 121.750 1.00 86.77 C
ATOM 8 O4' A B 72 39.564 46.406 122.025 1.00 86.47 O
ATOM 9 C3' A B 72 38.307 48.269 122.650 1.00 86.55 C
ATOM 10 O3' A B 72 36.986 48.725 122.901 1.00 87.06 O
ATOM 11 C2' A B 72 38.978 47.738 123.911 1.00 86.45 C
ATOM 12 O2' A B 72 38.090 47.012 124.738 1.00 86.48 O
ATOM 13 C1' A B 72 40.010 46.772 123.320 1.00 85.81 C
ATOM 14 N9 A B 72 41.370 47.306 123.216 1.00 84.66 N
ATOM 15 C8 A B 72 41.967 47.887 122.126 1.00 84.48 C
ATOM 16 N7 A B 72 43.209 48.254 122.337 1.00 84.35 N
ATOM 17 C5 A B 72 43.445 47.893 123.655 1.00 82.90 C
ATOM 18 C6 A B 72 44.573 48.015 124.478 1.00 81.82 C
ATOM 19 N6 A B 72 45.725 48.554 124.078 1.00 81.90 N
ATOM 20 N1 A B 72 44.478 47.559 125.743 1.00 81.70 N
ATOM 21 C2 A B 72 43.327 47.021 126.146 1.00 82.04 C
ATOM 22 N3 A B 72 42.198 46.850 125.469 1.00 83.92 N
ATOM 23 C4 A B 72 42.322 47.312 124.212 1.00 84.07 C
ATOM 24 P G B 73 36.728 50.271 123.246 1.00 87.51 P
ATOM 25 OP1 G B 73 35.264 50.426 123.466 1.00 87.02 O
ATOM 26 OP2 G B 73 37.405 51.094 122.205 1.00 86.31 O
ATOM 27 O5' G B 73 37.473 50.477 124.643 1.00 85.97 O
TER
ATOM 2 P C A 107 52.577 47.985 130.940 1.00 81.20 P
ATOM 3 OP1 C A 107 53.245 47.354 132.111 1.00 80.19 O
ATOM 4 OP2 C A 107 53.027 47.638 129.568 1.00 79.03 O
ATOM 5 O5' C A 107 51.016 47.685 131.006 1.00 79.46 O
ATOM 6 C5' C A 107 50.300 47.819 132.240 1.00 78.73 C
ATOM 7 C4' C A 107 48.857 47.445 132.047 1.00 79.07 C
ATOM 8 O4' C A 107 48.190 48.459 131.247 1.00 79.61 O
ATOM 9 C3' C A 107 48.620 46.175 131.256 1.00 79.57 C
ATOM 10 O3' C A 107 48.843 44.984 131.987 1.00 79.08 O
ATOM 11 C2' C A 107 47.183 46.361 130.796 1.00 79.99 C
ATOM 12 O2' C A 107 46.228 46.112 131.808 1.00 80.42 O
ATOM 13 C1' C A 107 47.195 47.846 130.436 1.00 80.16 C
ATOM 14 N1 C A 107 47.559 48.030 129.017 1.00 80.91 N
ATOM 15 C2 C A 107 46.533 48.119 128.064 1.00 80.96 C
ATOM 16 O2 C A 107 45.348 48.078 128.444 1.00 80.24 O
ATOM 17 N3 C A 107 46.858 48.241 126.756 1.00 80.91 N
ATOM 18 C4 C A 107 48.138 48.268 126.383 1.00 80.57 C
ATOM 19 N4 C A 107 48.405 48.352 125.079 1.00 79.95 N
ATOM 20 C5 C A 107 49.200 48.202 127.331 1.00 81.07 C
ATOM 21 C6 C A 107 48.870 48.088 128.624 1.00 80.73 C
ATOM 22 P G A 108 49.315 43.666 131.200 1.00 79.64 P
ATOM 23 OP1 G A 108 49.624 42.631 132.212 1.00 81.19 O
ATOM 24 OP2 G A 108 50.355 44.064 130.220 1.00 80.35 O
ATOM 25 O5' G A 108 48.013 43.215 130.395 1.00 80.59 O
TER
ATOM 1 O3' C B 71 39.381 47.683 117.386 1.00 89.33 O
ATOM 2 P A B 72 39.162 48.915 118.405 1.00 90.33 P
ATOM 3 OP1 A B 72 37.792 49.455 118.183 1.00 90.55 O
ATOM 4 OP2 A B 72 40.334 49.822 118.302 1.00 90.18 O
ATOM 5 O5' A B 72 39.204 48.240 119.849 1.00 89.70 O
ATOM 6 C5' A B 72 38.176 47.321 120.270 1.00 87.90 C
ATOM 7 C4' A B 72 38.294 47.047 121.750 1.00 86.77 C
ATOM 8 O4' A B 72 39.564 46.406 122.025 1.00 86.47 O
ATOM 9 C3' A B 72 38.307 48.269 122.650 1.00 86.55 C
ATOM 10 O3' A B 72 36.986 48.725 122.901 1.00 87.06 O
ATOM 11 C2' A B 72 38.978 47.738 123.911 1.00 86.45 C
ATOM 12 O2' A B 72 38.090 47.012 124.738 1.00 86.48 O
ATOM 13 C1' A B 72 40.010 46.772 123.320 1.00 85.81 C
ATOM 14 N9 A B 72 41.370 47.306 123.216 1.00 84.66 N
ATOM 15 C8 A B 72 41.967 47.887 122.126 1.00 84.48 C
ATOM 16 N7 A B 72 43.209 48.254 122.337 1.00 84.35 N
ATOM 17 C5 A B 72 43.445 47.893 123.655 1.00 82.90 C
ATOM 18 C6 A B 72 44.573 48.015 124.478 1.00 81.82 C
ATOM 19 N6 A B 72 45.725 48.554 124.078 1.00 81.90 N
ATOM 20 N1 A B 72 44.478 47.559 125.743 1.00 81.70 N
ATOM 21 C2 A B 72 43.327 47.021 126.146 1.00 82.04 C
ATOM 22 N3 A B 72 42.198 46.850 125.469 1.00 83.92 N
ATOM 23 C4 A B 72 42.322 47.312 124.212 1.00 84.07 C
ATOM 24 P G B 73 36.728 50.271 123.246 1.00 87.51 P
ATOM 25 OP1 G B 73 35.264 50.426 123.466 1.00 87.02 O
ATOM 26 OP2 G B 73 37.405 51.094 122.205 1.00 86.31 O
ATOM 27 O5' G B 73 37.473 50.477 124.643 1.00 85.97 O
TER
Atoms:
C2: (46.533,48.119,128.064)
OP1: (53.245,47.354,132.111)
OP2: (53.027,47.638,129.568)
C4: (48.138,48.268,126.383)
O5': (51.016,47.685,131.006)
C3': (48.620,46.175,131.256)
C1': (47.195,47.846,130.436)
O4': (48.190,48.459,131.247)
C5': (50.300,47.819,132.240)
P: (52.577,47.985,130.940)
O2: (45.348,48.078,128.444)
C4': (48.857,47.445,132.047)
C2': (47.183,46.361,130.796)
O2': (46.228,46.112,131.808)
N1: (47.559,48.030,129.017)
N3: (46.858,48.241,126.756)
N4: (48.405,48.352,125.079)
C6: (48.870,48.088,128.624)
C5: (49.200,48.202,127.331)
O3': (48.843,44.984,131.987)
OP1: (53.245,47.354,132.111)
OP2: (53.027,47.638,129.568)
C4: (48.138,48.268,126.383)
O5': (51.016,47.685,131.006)
C3': (48.620,46.175,131.256)
C1': (47.195,47.846,130.436)
O4': (48.190,48.459,131.247)
C5': (50.300,47.819,132.240)
P: (52.577,47.985,130.940)
O2: (45.348,48.078,128.444)
C4': (48.857,47.445,132.047)
C2': (47.183,46.361,130.796)
O2': (46.228,46.112,131.808)
N1: (47.559,48.030,129.017)
N3: (46.858,48.241,126.756)
N4: (48.405,48.352,125.079)
C6: (48.870,48.088,128.624)
C5: (49.200,48.202,127.331)
O3': (48.843,44.984,131.987)
OP1: (37.792,49.455,118.183)
OP2: (40.334,49.822,118.302)
C3': (38.307,48.269,122.650)
C1': (40.010,46.772,123.320)
C5': (38.176,47.321,120.270)
O4': (39.564,46.406,122.025)
C8: (41.967,47.887,122.126)
O2': (38.090,47.012,124.738)
C6: (44.573,48.015,124.478)
C5: (43.445,47.893,123.655)
C4: (42.322,47.312,124.212)
P: (39.162,48.915,118.405)
C4': (38.294,47.047,121.750)
C2': (38.978,47.738,123.911)
C2: (43.327,47.021,126.146)
N1: (44.478,47.559,125.743)
N3: (42.198,46.850,125.469)
N6: (45.725,48.554,124.078)
N7: (43.209,48.254,122.337)
N9: (41.370,47.306,123.216)
O5': (39.204,48.240,119.849)
O3': (36.986,48.725,122.901)
OP2: (40.334,49.822,118.302)
C3': (38.307,48.269,122.650)
C1': (40.010,46.772,123.320)
C5': (38.176,47.321,120.270)
O4': (39.564,46.406,122.025)
C8: (41.967,47.887,122.126)
O2': (38.090,47.012,124.738)
C6: (44.573,48.015,124.478)
C5: (43.445,47.893,123.655)
C4: (42.322,47.312,124.212)
P: (39.162,48.915,118.405)
C4': (38.294,47.047,121.750)
C2': (38.978,47.738,123.911)
C2: (43.327,47.021,126.146)
N1: (44.478,47.559,125.743)
N3: (42.198,46.850,125.469)
N6: (45.725,48.554,124.078)
N7: (43.209,48.254,122.337)
N9: (41.370,47.306,123.216)
O5': (39.204,48.240,119.849)
O3': (36.986,48.725,122.901)
Image (generated by PyMOL):