Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E62:E19
Extra
PDB:
ATOM 1 O3' A A 61 -14.218 18.434 115.949 1.00 89.69 O
ATOM 2 P C A 62 -15.450 17.502 116.398 1.00 87.57 P
ATOM 3 OP1 C A 62 -16.695 18.179 115.960 1.00 85.27 O
ATOM 4 OP2 C A 62 -15.266 17.162 117.831 1.00 85.55 O
ATOM 5 O5' C A 62 -15.282 16.173 115.536 1.00 82.05 O
ATOM 6 C5' C A 62 -15.883 16.056 114.250 1.00 80.65 C
ATOM 7 C4' C A 62 -15.718 14.650 113.722 1.00 81.08 C
ATOM 8 O4' C A 62 -14.306 14.376 113.531 1.00 84.50 O
ATOM 9 C3' C A 62 -16.198 13.544 114.647 1.00 84.77 C
ATOM 10 O3' C A 62 -17.588 13.305 114.476 1.00 85.19 O
ATOM 11 C2' C A 62 -15.369 12.354 114.185 1.00 88.45 C
ATOM 12 O2' C A 62 -15.888 11.731 113.026 1.00 89.42 O
ATOM 13 C1' C A 62 -14.032 13.026 113.867 1.00 86.49 C
ATOM 14 N1 C A 62 -13.111 13.022 115.012 1.00 84.18 N
ATOM 15 C2 C A 62 -12.423 11.848 115.314 1.00 84.88 C
ATOM 16 O2 C A 62 -12.610 10.846 114.604 1.00 83.72 O
ATOM 17 N3 C A 62 -11.574 11.831 116.369 1.00 86.05 N
ATOM 18 C4 C A 62 -11.404 12.931 117.106 1.00 86.49 C
ATOM 19 N4 C A 62 -10.558 12.870 118.139 1.00 85.99 N
ATOM 20 C5 C A 62 -12.095 14.145 116.818 1.00 85.33 C
ATOM 21 C6 C A 62 -12.929 14.145 115.771 1.00 84.09 C
ATOM 22 P C A 63 -18.475 12.836 115.730 1.00 91.17 P
ATOM 23 OP1 C A 63 -19.893 12.776 115.295 1.00 97.38 O
ATOM 24 OP2 C A 63 -18.098 13.690 116.885 1.00 90.31 O
ATOM 25 O5' C A 63 -17.983 11.350 116.013 1.00 83.39 O
TER
ATOM 1 O3' G B 18 -6.192 3.551 123.617 1.00 90.70 O
ATOM 2 P A B 19 -5.119 3.924 122.476 1.00 80.76 P
ATOM 3 OP1 A B 19 -4.240 2.749 122.263 1.00 86.79 O
ATOM 4 OP2 A B 19 -4.520 5.235 122.834 1.00 81.63 O
ATOM 5 O5' A B 19 -6.002 4.131 121.167 1.00 83.67 O
ATOM 6 C5' A B 19 -6.723 3.045 120.598 1.00 74.74 C
ATOM 7 C4' A B 19 -7.686 3.551 119.553 1.00 72.87 C
ATOM 8 O4' A B 19 -8.672 4.414 120.186 1.00 66.39 O
ATOM 9 C3' A B 19 -7.084 4.432 118.470 1.00 72.53 C
ATOM 10 O3' A B 19 -6.471 3.672 117.435 1.00 78.44 O
ATOM 11 C2' A B 19 -8.311 5.182 117.974 1.00 75.15 C
ATOM 12 O2' A B 19 -9.130 4.396 117.130 1.00 70.15 O
ATOM 13 C1' A B 19 -9.035 5.459 119.292 1.00 67.31 C
ATOM 14 N9 A B 19 -8.614 6.732 119.877 1.00 66.59 N
ATOM 15 C8 A B 19 -7.776 6.941 120.945 1.00 65.70 C
ATOM 16 N7 A B 19 -7.576 8.209 121.220 1.00 64.88 N
ATOM 17 C5 A B 19 -8.335 8.879 120.271 1.00 63.29 C
ATOM 18 C6 A B 19 -8.549 10.245 120.023 1.00 62.34 C
ATOM 19 N6 A B 19 -7.997 11.228 120.739 1.00 61.35 N
ATOM 20 N1 A B 19 -9.362 10.576 119.000 1.00 64.12 N
ATOM 21 C2 A B 19 -9.917 9.596 118.281 1.00 65.38 C
ATOM 22 N3 A B 19 -9.795 8.280 118.414 1.00 66.52 N
ATOM 23 C4 A B 19 -8.981 7.983 119.440 1.00 65.64 C
ATOM 24 P G B 20 -5.230 4.296 116.623 1.00 74.66 P
ATOM 25 OP1 G B 20 -4.856 3.375 115.521 1.00 74.83 O
ATOM 26 OP2 G B 20 -4.208 4.687 117.629 1.00 79.38 O
ATOM 27 O5' G B 20 -5.835 5.618 115.977 1.00 69.20 O
TER
ATOM 2 P C A 62 -15.450 17.502 116.398 1.00 87.57 P
ATOM 3 OP1 C A 62 -16.695 18.179 115.960 1.00 85.27 O
ATOM 4 OP2 C A 62 -15.266 17.162 117.831 1.00 85.55 O
ATOM 5 O5' C A 62 -15.282 16.173 115.536 1.00 82.05 O
ATOM 6 C5' C A 62 -15.883 16.056 114.250 1.00 80.65 C
ATOM 7 C4' C A 62 -15.718 14.650 113.722 1.00 81.08 C
ATOM 8 O4' C A 62 -14.306 14.376 113.531 1.00 84.50 O
ATOM 9 C3' C A 62 -16.198 13.544 114.647 1.00 84.77 C
ATOM 10 O3' C A 62 -17.588 13.305 114.476 1.00 85.19 O
ATOM 11 C2' C A 62 -15.369 12.354 114.185 1.00 88.45 C
ATOM 12 O2' C A 62 -15.888 11.731 113.026 1.00 89.42 O
ATOM 13 C1' C A 62 -14.032 13.026 113.867 1.00 86.49 C
ATOM 14 N1 C A 62 -13.111 13.022 115.012 1.00 84.18 N
ATOM 15 C2 C A 62 -12.423 11.848 115.314 1.00 84.88 C
ATOM 16 O2 C A 62 -12.610 10.846 114.604 1.00 83.72 O
ATOM 17 N3 C A 62 -11.574 11.831 116.369 1.00 86.05 N
ATOM 18 C4 C A 62 -11.404 12.931 117.106 1.00 86.49 C
ATOM 19 N4 C A 62 -10.558 12.870 118.139 1.00 85.99 N
ATOM 20 C5 C A 62 -12.095 14.145 116.818 1.00 85.33 C
ATOM 21 C6 C A 62 -12.929 14.145 115.771 1.00 84.09 C
ATOM 22 P C A 63 -18.475 12.836 115.730 1.00 91.17 P
ATOM 23 OP1 C A 63 -19.893 12.776 115.295 1.00 97.38 O
ATOM 24 OP2 C A 63 -18.098 13.690 116.885 1.00 90.31 O
ATOM 25 O5' C A 63 -17.983 11.350 116.013 1.00 83.39 O
TER
ATOM 1 O3' G B 18 -6.192 3.551 123.617 1.00 90.70 O
ATOM 2 P A B 19 -5.119 3.924 122.476 1.00 80.76 P
ATOM 3 OP1 A B 19 -4.240 2.749 122.263 1.00 86.79 O
ATOM 4 OP2 A B 19 -4.520 5.235 122.834 1.00 81.63 O
ATOM 5 O5' A B 19 -6.002 4.131 121.167 1.00 83.67 O
ATOM 6 C5' A B 19 -6.723 3.045 120.598 1.00 74.74 C
ATOM 7 C4' A B 19 -7.686 3.551 119.553 1.00 72.87 C
ATOM 8 O4' A B 19 -8.672 4.414 120.186 1.00 66.39 O
ATOM 9 C3' A B 19 -7.084 4.432 118.470 1.00 72.53 C
ATOM 10 O3' A B 19 -6.471 3.672 117.435 1.00 78.44 O
ATOM 11 C2' A B 19 -8.311 5.182 117.974 1.00 75.15 C
ATOM 12 O2' A B 19 -9.130 4.396 117.130 1.00 70.15 O
ATOM 13 C1' A B 19 -9.035 5.459 119.292 1.00 67.31 C
ATOM 14 N9 A B 19 -8.614 6.732 119.877 1.00 66.59 N
ATOM 15 C8 A B 19 -7.776 6.941 120.945 1.00 65.70 C
ATOM 16 N7 A B 19 -7.576 8.209 121.220 1.00 64.88 N
ATOM 17 C5 A B 19 -8.335 8.879 120.271 1.00 63.29 C
ATOM 18 C6 A B 19 -8.549 10.245 120.023 1.00 62.34 C
ATOM 19 N6 A B 19 -7.997 11.228 120.739 1.00 61.35 N
ATOM 20 N1 A B 19 -9.362 10.576 119.000 1.00 64.12 N
ATOM 21 C2 A B 19 -9.917 9.596 118.281 1.00 65.38 C
ATOM 22 N3 A B 19 -9.795 8.280 118.414 1.00 66.52 N
ATOM 23 C4 A B 19 -8.981 7.983 119.440 1.00 65.64 C
ATOM 24 P G B 20 -5.230 4.296 116.623 1.00 74.66 P
ATOM 25 OP1 G B 20 -4.856 3.375 115.521 1.00 74.83 O
ATOM 26 OP2 G B 20 -4.208 4.687 117.629 1.00 79.38 O
ATOM 27 O5' G B 20 -5.835 5.618 115.977 1.00 69.20 O
TER
Atoms:
C2: (-12.423,11.848,115.314)
OP1: (-16.695,18.179,115.960)
OP2: (-15.266,17.162,117.831)
C4: (-11.404,12.931,117.106)
O5': (-15.282,16.173,115.536)
C3': (-16.198,13.544,114.647)
C1': (-14.032,13.026,113.867)
O4': (-14.306,14.376,113.531)
C5': (-15.883,16.056,114.250)
P: (-15.450,17.502,116.398)
O2: (-12.610,10.846,114.604)
C4': (-15.718,14.650,113.722)
C2': (-15.369,12.354,114.185)
O2': (-15.888,11.731,113.026)
N1: (-13.111,13.022,115.012)
N3: (-11.574,11.831,116.369)
N4: (-10.558,12.870,118.139)
C6: (-12.929,14.145,115.771)
C5: (-12.095,14.145,116.818)
O3': (-17.588,13.305,114.476)
OP1: (-16.695,18.179,115.960)
OP2: (-15.266,17.162,117.831)
C4: (-11.404,12.931,117.106)
O5': (-15.282,16.173,115.536)
C3': (-16.198,13.544,114.647)
C1': (-14.032,13.026,113.867)
O4': (-14.306,14.376,113.531)
C5': (-15.883,16.056,114.250)
P: (-15.450,17.502,116.398)
O2: (-12.610,10.846,114.604)
C4': (-15.718,14.650,113.722)
C2': (-15.369,12.354,114.185)
O2': (-15.888,11.731,113.026)
N1: (-13.111,13.022,115.012)
N3: (-11.574,11.831,116.369)
N4: (-10.558,12.870,118.139)
C6: (-12.929,14.145,115.771)
C5: (-12.095,14.145,116.818)
O3': (-17.588,13.305,114.476)
OP1: (-4.240,2.749,122.263)
OP2: (-4.520,5.235,122.834)
C3': (-7.084,4.432,118.470)
C1': (-9.035,5.459,119.292)
C5': (-6.723,3.045,120.598)
O4': (-8.672,4.414,120.186)
C8: (-7.776,6.941,120.945)
O2': (-9.130,4.396,117.130)
C6: (-8.549,10.245,120.023)
C5: (-8.335,8.879,120.271)
C4: (-8.981,7.983,119.440)
P: (-5.119,3.924,122.476)
C4': (-7.686,3.551,119.553)
C2': (-8.311,5.182,117.974)
C2: (-9.917,9.596,118.281)
N1: (-9.362,10.576,119.000)
N3: (-9.795,8.280,118.414)
N6: (-7.997,11.228,120.739)
N7: (-7.576,8.209,121.220)
N9: (-8.614,6.732,119.877)
O5': (-6.002,4.131,121.167)
O3': (-6.471,3.672,117.435)
OP2: (-4.520,5.235,122.834)
C3': (-7.084,4.432,118.470)
C1': (-9.035,5.459,119.292)
C5': (-6.723,3.045,120.598)
O4': (-8.672,4.414,120.186)
C8: (-7.776,6.941,120.945)
O2': (-9.130,4.396,117.130)
C6: (-8.549,10.245,120.023)
C5: (-8.335,8.879,120.271)
C4: (-8.981,7.983,119.440)
P: (-5.119,3.924,122.476)
C4': (-7.686,3.551,119.553)
C2': (-8.311,5.182,117.974)
C2: (-9.917,9.596,118.281)
N1: (-9.362,10.576,119.000)
N3: (-9.795,8.280,118.414)
N6: (-7.997,11.228,120.739)
N7: (-7.576,8.209,121.220)
N9: (-8.614,6.732,119.877)
O5': (-6.002,4.131,121.167)
O3': (-6.471,3.672,117.435)
Image (generated by PyMOL):