Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01828:01817
Extra
PDB:
ATOM 1 O3' A A1827 104.874 135.869 57.913 1.00 27.97 O
ATOM 2 P C A1828 106.339 136.526 57.931 1.00 27.79 P
ATOM 3 OP1 C A1828 106.120 137.838 58.566 1.00 25.99 O
ATOM 4 OP2 C A1828 106.941 136.457 56.584 1.00 26.08 O
ATOM 5 O5' C A1828 107.185 135.595 58.914 1.00 27.49 O
ATOM 6 C5' C A1828 106.849 135.511 60.322 1.00 30.31 C
ATOM 7 C4' C A1828 107.633 134.404 61.001 1.00 30.46 C
ATOM 8 O4' C A1828 107.295 133.123 60.417 1.00 30.61 O
ATOM 9 C3' C A1828 109.145 134.489 60.885 1.00 30.59 C
ATOM 10 O3' C A1828 109.663 135.336 61.901 1.00 31.35 O
ATOM 11 C2' C A1828 109.574 133.042 61.080 1.00 29.78 C
ATOM 12 O2' C A1828 109.584 132.634 62.433 1.00 33.43 O
ATOM 13 C1' C A1828 108.445 132.298 60.375 1.00 27.18 C
ATOM 14 N1 C A1828 108.738 131.989 58.972 1.00 24.43 N
ATOM 15 C2 C A1828 109.542 130.887 58.682 1.00 24.03 C
ATOM 16 O2 C A1828 110.027 130.230 59.620 1.00 22.71 O
ATOM 17 N3 C A1828 109.775 130.568 57.389 1.00 24.12 N
ATOM 18 C4 C A1828 109.248 131.311 56.411 1.00 23.57 C
ATOM 19 N4 C A1828 109.488 130.950 55.149 1.00 24.09 N
ATOM 20 C5 C A1828 108.447 132.454 56.683 1.00 23.58 C
ATOM 21 C6 C A1828 108.221 132.754 57.963 1.00 23.44 C
ATOM 22 P U A1829 110.874 136.326 61.571 1.00 31.50 P
ATOM 23 OP1 U A1829 112.117 135.518 61.470 1.00 30.06 O
ATOM 24 OP2 U A1829 110.793 137.454 62.539 1.00 26.67 O
ATOM 25 O5' U A1829 110.533 136.864 60.116 1.00 32.53 O
TER
ATOM 1 O3' A B1816 114.868 120.837 57.183 1.00 34.63 O
ATOM 2 P A B1817 113.364 120.550 57.683 1.00 33.22 P
ATOM 3 OP1 A B1817 113.122 119.093 57.570 1.00 33.45 O
ATOM 4 OP2 A B1817 112.483 121.494 56.963 1.00 33.46 O
ATOM 5 O5' A B1817 113.357 120.962 59.227 1.00 31.41 O
ATOM 6 C5' A B1817 114.094 120.207 60.218 1.00 29.33 C
ATOM 7 C4' A B1817 113.931 120.838 61.582 1.00 28.12 C
ATOM 8 O4' A B1817 114.486 122.173 61.538 1.00 27.94 O
ATOM 9 C3' A B1817 112.489 121.042 62.021 1.00 29.91 C
ATOM 10 O3' A B1817 111.937 119.890 62.648 1.00 33.37 O
ATOM 11 C2' A B1817 112.584 122.230 62.962 1.00 27.97 C
ATOM 12 O2' A B1817 113.020 121.874 64.256 1.00 28.10 O
ATOM 13 C1' A B1817 113.652 123.069 62.260 1.00 27.86 C
ATOM 14 N9 A B1817 113.086 124.027 61.309 1.00 25.66 N
ATOM 15 C8 A B1817 113.019 123.911 59.939 1.00 24.72 C
ATOM 16 N7 A B1817 112.444 124.930 59.351 1.00 23.85 N
ATOM 17 C5 A B1817 112.114 125.779 60.399 1.00 22.67 C
ATOM 18 C6 A B1817 111.479 127.033 60.437 1.00 21.83 C
ATOM 19 N6 A B1817 111.052 127.683 59.353 1.00 22.62 N
ATOM 20 N1 A B1817 111.295 127.605 61.641 1.00 20.31 N
ATOM 21 C2 A B1817 111.723 126.959 62.725 1.00 22.35 C
ATOM 22 N3 A B1817 112.336 125.782 62.821 1.00 22.58 N
ATOM 23 C4 A B1817 112.504 125.236 61.609 1.00 23.42 C
ATOM 24 P U B1818 110.441 119.434 62.285 1.00 33.98 P
ATOM 25 OP1 U B1818 110.084 118.325 63.189 1.00 34.91 O
ATOM 26 OP2 U B1818 110.373 119.239 60.808 1.00 33.20 O
ATOM 27 O5' U B1818 109.562 120.694 62.695 1.00 32.97 O
TER
ATOM 2 P C A1828 106.339 136.526 57.931 1.00 27.79 P
ATOM 3 OP1 C A1828 106.120 137.838 58.566 1.00 25.99 O
ATOM 4 OP2 C A1828 106.941 136.457 56.584 1.00 26.08 O
ATOM 5 O5' C A1828 107.185 135.595 58.914 1.00 27.49 O
ATOM 6 C5' C A1828 106.849 135.511 60.322 1.00 30.31 C
ATOM 7 C4' C A1828 107.633 134.404 61.001 1.00 30.46 C
ATOM 8 O4' C A1828 107.295 133.123 60.417 1.00 30.61 O
ATOM 9 C3' C A1828 109.145 134.489 60.885 1.00 30.59 C
ATOM 10 O3' C A1828 109.663 135.336 61.901 1.00 31.35 O
ATOM 11 C2' C A1828 109.574 133.042 61.080 1.00 29.78 C
ATOM 12 O2' C A1828 109.584 132.634 62.433 1.00 33.43 O
ATOM 13 C1' C A1828 108.445 132.298 60.375 1.00 27.18 C
ATOM 14 N1 C A1828 108.738 131.989 58.972 1.00 24.43 N
ATOM 15 C2 C A1828 109.542 130.887 58.682 1.00 24.03 C
ATOM 16 O2 C A1828 110.027 130.230 59.620 1.00 22.71 O
ATOM 17 N3 C A1828 109.775 130.568 57.389 1.00 24.12 N
ATOM 18 C4 C A1828 109.248 131.311 56.411 1.00 23.57 C
ATOM 19 N4 C A1828 109.488 130.950 55.149 1.00 24.09 N
ATOM 20 C5 C A1828 108.447 132.454 56.683 1.00 23.58 C
ATOM 21 C6 C A1828 108.221 132.754 57.963 1.00 23.44 C
ATOM 22 P U A1829 110.874 136.326 61.571 1.00 31.50 P
ATOM 23 OP1 U A1829 112.117 135.518 61.470 1.00 30.06 O
ATOM 24 OP2 U A1829 110.793 137.454 62.539 1.00 26.67 O
ATOM 25 O5' U A1829 110.533 136.864 60.116 1.00 32.53 O
TER
ATOM 1 O3' A B1816 114.868 120.837 57.183 1.00 34.63 O
ATOM 2 P A B1817 113.364 120.550 57.683 1.00 33.22 P
ATOM 3 OP1 A B1817 113.122 119.093 57.570 1.00 33.45 O
ATOM 4 OP2 A B1817 112.483 121.494 56.963 1.00 33.46 O
ATOM 5 O5' A B1817 113.357 120.962 59.227 1.00 31.41 O
ATOM 6 C5' A B1817 114.094 120.207 60.218 1.00 29.33 C
ATOM 7 C4' A B1817 113.931 120.838 61.582 1.00 28.12 C
ATOM 8 O4' A B1817 114.486 122.173 61.538 1.00 27.94 O
ATOM 9 C3' A B1817 112.489 121.042 62.021 1.00 29.91 C
ATOM 10 O3' A B1817 111.937 119.890 62.648 1.00 33.37 O
ATOM 11 C2' A B1817 112.584 122.230 62.962 1.00 27.97 C
ATOM 12 O2' A B1817 113.020 121.874 64.256 1.00 28.10 O
ATOM 13 C1' A B1817 113.652 123.069 62.260 1.00 27.86 C
ATOM 14 N9 A B1817 113.086 124.027 61.309 1.00 25.66 N
ATOM 15 C8 A B1817 113.019 123.911 59.939 1.00 24.72 C
ATOM 16 N7 A B1817 112.444 124.930 59.351 1.00 23.85 N
ATOM 17 C5 A B1817 112.114 125.779 60.399 1.00 22.67 C
ATOM 18 C6 A B1817 111.479 127.033 60.437 1.00 21.83 C
ATOM 19 N6 A B1817 111.052 127.683 59.353 1.00 22.62 N
ATOM 20 N1 A B1817 111.295 127.605 61.641 1.00 20.31 N
ATOM 21 C2 A B1817 111.723 126.959 62.725 1.00 22.35 C
ATOM 22 N3 A B1817 112.336 125.782 62.821 1.00 22.58 N
ATOM 23 C4 A B1817 112.504 125.236 61.609 1.00 23.42 C
ATOM 24 P U B1818 110.441 119.434 62.285 1.00 33.98 P
ATOM 25 OP1 U B1818 110.084 118.325 63.189 1.00 34.91 O
ATOM 26 OP2 U B1818 110.373 119.239 60.808 1.00 33.20 O
ATOM 27 O5' U B1818 109.562 120.694 62.695 1.00 32.97 O
TER
Atoms:
C2: (109.542,130.887,58.682)
OP1: (106.120,137.838,58.566)
OP2: (106.941,136.457,56.584)
C4: (109.248,131.311,56.411)
O5': (107.185,135.595,58.914)
C3': (109.145,134.489,60.885)
C1': (108.445,132.298,60.375)
O4': (107.295,133.123,60.417)
C5': (106.849,135.511,60.322)
P: (106.339,136.526,57.931)
O2: (110.027,130.230,59.620)
C4': (107.633,134.404,61.001)
C2': (109.574,133.042,61.080)
O2': (109.584,132.634,62.433)
N1: (108.738,131.989,58.972)
N3: (109.775,130.568,57.389)
N4: (109.488,130.950,55.149)
C6: (108.221,132.754,57.963)
C5: (108.447,132.454,56.683)
O3': (109.663,135.336,61.901)
OP1: (106.120,137.838,58.566)
OP2: (106.941,136.457,56.584)
C4: (109.248,131.311,56.411)
O5': (107.185,135.595,58.914)
C3': (109.145,134.489,60.885)
C1': (108.445,132.298,60.375)
O4': (107.295,133.123,60.417)
C5': (106.849,135.511,60.322)
P: (106.339,136.526,57.931)
O2: (110.027,130.230,59.620)
C4': (107.633,134.404,61.001)
C2': (109.574,133.042,61.080)
O2': (109.584,132.634,62.433)
N1: (108.738,131.989,58.972)
N3: (109.775,130.568,57.389)
N4: (109.488,130.950,55.149)
C6: (108.221,132.754,57.963)
C5: (108.447,132.454,56.683)
O3': (109.663,135.336,61.901)
OP1: (113.122,119.093,57.570)
OP2: (112.483,121.494,56.963)
C3': (112.489,121.042,62.021)
C1': (113.652,123.069,62.260)
C5': (114.094,120.207,60.218)
O4': (114.486,122.173,61.538)
C8: (113.019,123.911,59.939)
O2': (113.020,121.874,64.256)
C6: (111.479,127.033,60.437)
C5: (112.114,125.779,60.399)
C4: (112.504,125.236,61.609)
P: (113.364,120.550,57.683)
C4': (113.931,120.838,61.582)
C2': (112.584,122.230,62.962)
C2: (111.723,126.959,62.725)
N1: (111.295,127.605,61.641)
N3: (112.336,125.782,62.821)
N6: (111.052,127.683,59.353)
N7: (112.444,124.930,59.351)
N9: (113.086,124.027,61.309)
O5': (113.357,120.962,59.227)
O3': (111.937,119.890,62.648)
OP2: (112.483,121.494,56.963)
C3': (112.489,121.042,62.021)
C1': (113.652,123.069,62.260)
C5': (114.094,120.207,60.218)
O4': (114.486,122.173,61.538)
C8: (113.019,123.911,59.939)
O2': (113.020,121.874,64.256)
C6: (111.479,127.033,60.437)
C5: (112.114,125.779,60.399)
C4: (112.504,125.236,61.609)
P: (113.364,120.550,57.683)
C4': (113.931,120.838,61.582)
C2': (112.584,122.230,62.962)
C2: (111.723,126.959,62.725)
N1: (111.295,127.605,61.641)
N3: (112.336,125.782,62.821)
N6: (111.052,127.683,59.353)
N7: (112.444,124.930,59.351)
N9: (113.086,124.027,61.309)
O5': (113.357,120.962,59.227)
O3': (111.937,119.890,62.648)
Image (generated by PyMOL):