ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1360:A1361

Extra

PDB:
ATOM 1 O3' U A1359 -15.700 -57.911 26.172 1.00 38.28 O
ATOM 2 P U A1360 -14.545 -56.864 25.791 1.00 22.66 P
ATOM 3 OP1 U A1360 -15.139 -55.516 25.942 1.00 49.51 O
ATOM 4 OP2 U A1360 -13.947 -57.250 24.488 1.00 37.33 O
ATOM 5 O5' U A1360 -13.483 -57.025 26.981 1.00 37.98 O
ATOM 6 C5' U A1360 -13.861 -56.518 28.246 1.00 38.35 C
ATOM 7 C4' U A1360 -12.672 -56.361 29.166 1.00 39.30 C
ATOM 8 O4' U A1360 -11.840 -57.508 28.959 1.00 30.96 O
ATOM 9 C3' U A1360 -11.760 -55.180 28.871 1.00 41.20 C
ATOM 10 O3' U A1360 -10.971 -54.901 29.998 1.00 33.96 O
ATOM 11 C2' U A1360 -10.863 -55.749 27.797 1.00 41.12 C
ATOM 12 O2' U A1360 -9.675 -55.000 27.687 1.00 47.50 O
ATOM 13 C1' U A1360 -10.591 -57.083 28.466 1.00 40.31 C
ATOM 14 N1 U A1360 -10.085 -58.124 27.542 1.00 46.93 N
ATOM 15 C2 U A1360 -9.016 -58.899 27.943 1.00 55.84 C
ATOM 16 O2 U A1360 -8.475 -58.765 29.028 1.00 58.86 O
ATOM 17 N3 U A1360 -8.613 -59.834 27.025 1.00 54.53 N
ATOM 18 C4 U A1360 -9.163 -60.058 25.776 1.00 55.94 C
ATOM 19 O4 U A1360 -8.699 -60.930 25.047 1.00 62.51 O
ATOM 20 C5 U A1360 -10.275 -59.207 25.441 1.00 65.38 C
ATOM 21 C6 U A1360 -10.692 -58.288 26.316 1.00 52.68 C
ATOM 22 P A A1361 -11.520 -53.991 31.198 1.00 44.78 P
ATOM 23 OP1 A A1361 -10.778 -54.377 32.417 1.00 42.17 O
ATOM 24 OP2 A A1361 -13.017 -53.976 31.203 1.00 58.81 O
ATOM 25 O5' A A1361 -10.992 -52.540 30.770 1.00 42.01 O
TER

ATOM 1 O3' U B1360 -10.971 -54.901 29.998 1.00 33.96 O
ATOM 2 P A B1361 -11.520 -53.991 31.198 1.00 44.78 P
ATOM 3 OP1 A B1361 -10.778 -54.377 32.417 1.00 42.17 O
ATOM 4 OP2 A B1361 -13.017 -53.976 31.203 1.00 58.81 O
ATOM 5 O5' A B1361 -10.992 -52.540 30.770 1.00 42.01 O
ATOM 6 C5' A B1361 -9.623 -52.191 30.898 1.00 52.96 C
ATOM 7 C4' A B1361 -9.348 -50.841 30.262 1.00 49.27 C
ATOM 8 O4' A B1361 -9.880 -50.820 28.908 1.00 49.31 O
ATOM 9 C3' A B1361 -9.987 -49.680 31.011 1.00 46.25 C
ATOM 10 O3' A B1361 -9.174 -48.526 30.990 1.00 50.30 O
ATOM 11 C2' A B1361 -11.229 -49.411 30.186 1.00 48.25 C
ATOM 12 O2' A B1361 -11.582 -48.054 30.263 1.00 53.34 O
ATOM 13 C1' A B1361 -10.751 -49.715 28.774 1.00 52.19 C
ATOM 14 N9 A B1361 -11.857 -50.030 27.864 1.00 54.11 N
ATOM 15 C8 A B1361 -12.678 -51.126 27.888 1.00 55.82 C
ATOM 16 N7 A B1361 -13.597 -51.149 26.953 1.00 49.84 N
ATOM 17 C5 A B1361 -13.363 -49.978 26.273 1.00 50.23 C
ATOM 18 C6 A B1361 -14.001 -49.418 25.165 1.00 49.02 C
ATOM 19 N6 A B1361 -15.031 -50.011 24.559 1.00 44.09 N
ATOM 20 N1 A B1361 -13.530 -48.237 24.710 1.00 58.25 N
ATOM 21 C2 A B1361 -12.492 -47.662 25.332 1.00 57.16 C
ATOM 22 N3 A B1361 -11.814 -48.099 26.391 1.00 56.55 N
ATOM 23 C4 A B1361 -12.305 -49.273 26.813 1.00 53.83 C
ATOM 24 P G B1362 -7.743 -48.461 31.699 1.00 45.02 P
ATOM 25 OP1 G B1362 -6.768 -48.318 30.595 1.00 57.18 O
ATOM 26 OP2 G B1362 -7.619 -49.580 32.673 1.00 44.53 O
ATOM 27 O5' G B1362 -7.794 -47.084 32.526 1.00 41.44 O
TER

Atoms:
C4: (-9.163,-60.058,25.776)
N3: (-8.613,-59.834,27.025)
OP1: (-15.139,-55.516,25.942)
OP2: (-13.947,-57.250,24.488)
C2: (-9.016,-58.899,27.943)
C1': (-10.591,-57.083,28.466)
C3': (-11.760,-55.180,28.871)
O5': (-13.483,-57.025,26.981)
O4': (-11.840,-57.508,28.959)
C5': (-13.861,-56.518,28.246)
P: (-14.545,-56.864,25.791)
C4': (-12.672,-56.361,29.166)
C2': (-10.863,-55.749,27.797)
O2': (-9.675,-55.000,27.687)
N1: (-10.085,-58.124,27.542)
O4: (-8.699,-60.930,25.047)
O2: (-8.475,-58.765,29.028)
C6: (-10.692,-58.288,26.316)
C5: (-10.275,-59.207,25.441)
O3': (-10.971,-54.901,29.998)
OP1: (-10.778,-54.377,32.417)
OP2: (-13.017,-53.976,31.203)
C3': (-9.987,-49.680,31.011)
C1': (-10.751,-49.715,28.774)
C5': (-9.623,-52.191,30.898)
O4': (-9.880,-50.820,28.908)
C8: (-12.678,-51.126,27.888)
O2': (-11.582,-48.054,30.263)
C6: (-14.001,-49.418,25.165)
C5: (-13.363,-49.978,26.273)
C4: (-12.305,-49.273,26.813)
P: (-11.520,-53.991,31.198)
C4': (-9.348,-50.841,30.262)
C2': (-11.229,-49.411,30.186)
C2: (-12.492,-47.662,25.332)
N1: (-13.530,-48.237,24.710)
N3: (-11.814,-48.099,26.391)
N6: (-15.031,-50.011,24.559)
N7: (-13.597,-51.149,26.953)
N9: (-11.857,-50.030,27.864)
O5': (-10.992,-52.540,30.770)
O3': (-9.174,-48.526,30.990)
Image (generated by PyMOL):
PyMOL image
show in jmol