Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1400:A1498
Extra
PDB:
ATOM 1 O3' G A1399 -101.411 26.071 -14.581 1.00 7.96 O
ATOM 2 P C A1400 -100.736 24.642 -14.925 1.00 1.43 P
ATOM 3 OP1 C A1400 -100.752 24.496 -16.396 1.00 1.43 O
ATOM 4 OP2 C A1400 -101.423 23.604 -14.106 1.00 1.43 O
ATOM 5 O5' C A1400 -99.248 24.853 -14.428 1.00 1.43 O
ATOM 6 C5' C A1400 -98.388 25.709 -15.153 1.00 1.43 C
ATOM 7 C4' C A1400 -97.082 25.917 -14.452 1.00 1.43 C
ATOM 8 O4' C A1400 -97.315 26.155 -13.035 1.00 1.43 O
ATOM 9 C3' C A1400 -96.120 24.749 -14.468 1.00 1.43 C
ATOM 10 O3' C A1400 -95.433 24.606 -15.696 1.00 1.43 O
ATOM 11 C2' C A1400 -95.219 25.076 -13.287 1.00 1.43 C
ATOM 12 O2' C A1400 -94.302 26.112 -13.623 1.00 1.43 O
ATOM 13 C1' C A1400 -96.243 25.628 -12.287 1.00 1.43 C
ATOM 14 N1 C A1400 -96.783 24.576 -11.371 1.00 1.69 N
ATOM 15 C2 C A1400 -95.929 23.964 -10.452 1.00 1.69 C
ATOM 16 O2 C A1400 -94.742 24.283 -10.441 1.00 1.69 O
ATOM 17 N3 C A1400 -96.375 23.034 -9.598 1.00 1.69 N
ATOM 18 C4 C A1400 -97.643 22.686 -9.608 1.00 1.69 C
ATOM 19 N4 C A1400 -98.018 21.746 -8.719 1.00 1.69 N
ATOM 20 C5 C A1400 -98.553 23.294 -10.532 1.00 1.69 C
ATOM 21 C6 C A1400 -98.099 24.226 -11.381 1.00 1.69 C
ATOM 22 P C A1401 -95.163 23.130 -16.308 1.00 9.62 P
ATOM 23 OP1 C A1401 -94.343 23.314 -17.531 1.00 9.62 O
ATOM 24 OP2 C A1401 -96.474 22.432 -16.422 1.00 9.62 O
ATOM 25 O5' C A1401 -94.302 22.424 -15.171 1.00 9.62 O
TER
ATOM 1 O3' A B1497 -88.069 21.240 -1.934 1.00 10.18 O
ATOM 2 P A B1498 -88.626 22.730 -1.955 1.00 0.66 P
ATOM 3 OP1 A B1498 -87.804 23.501 -0.984 1.00 0.66 O
ATOM 4 OP2 A B1498 -90.081 22.652 -1.745 1.00 0.66 O
ATOM 5 O5' A B1498 -88.313 23.186 -3.449 1.00 0.66 O
ATOM 6 C5' A B1498 -86.979 23.213 -3.931 1.00 0.66 C
ATOM 7 C4' A B1498 -86.907 23.823 -5.301 1.00 0.66 C
ATOM 8 O4' A B1498 -87.501 22.926 -6.268 1.00 0.66 O
ATOM 9 C3' A B1498 -87.678 25.107 -5.475 1.00 0.66 C
ATOM 10 O3' A B1498 -86.951 26.230 -5.054 1.00 0.66 O
ATOM 11 C2' A B1498 -87.990 25.111 -6.956 1.00 0.66 C
ATOM 12 O2' A B1498 -86.861 25.476 -7.704 1.00 0.66 O
ATOM 13 C1' A B1498 -88.256 23.654 -7.203 1.00 0.66 C
ATOM 14 N9 A B1498 -89.661 23.340 -6.998 1.00 0.73 N
ATOM 15 C8 A B1498 -90.247 22.785 -5.907 1.00 0.73 C
ATOM 16 N7 A B1498 -91.537 22.636 -6.059 1.00 0.73 N
ATOM 17 C5 A B1498 -91.780 23.142 -7.318 1.00 0.73 C
ATOM 18 C6 A B1498 -92.951 23.275 -8.048 1.00 0.73 C
ATOM 19 N6 A B1498 -94.138 22.887 -7.596 1.00 0.73 N
ATOM 20 N1 A B1498 -92.861 23.822 -9.257 1.00 0.73 N
ATOM 21 C2 A B1498 -91.657 24.202 -9.694 1.00 0.73 C
ATOM 22 N3 A B1498 -90.474 24.128 -9.094 1.00 0.73 N
ATOM 23 C4 A B1498 -90.629 23.580 -7.896 1.00 0.73 C
ATOM 24 P C B1499 -87.713 27.470 -4.408 1.00 2.87 P
ATOM 25 OP1 C B1499 -86.656 28.474 -4.027 1.00 2.87 O
ATOM 26 OP2 C B1499 -88.592 26.927 -3.354 1.00 2.87 O
ATOM 27 O5' C B1499 -88.588 28.022 -5.637 1.00 2.87 O
TER
ATOM 2 P C A1400 -100.736 24.642 -14.925 1.00 1.43 P
ATOM 3 OP1 C A1400 -100.752 24.496 -16.396 1.00 1.43 O
ATOM 4 OP2 C A1400 -101.423 23.604 -14.106 1.00 1.43 O
ATOM 5 O5' C A1400 -99.248 24.853 -14.428 1.00 1.43 O
ATOM 6 C5' C A1400 -98.388 25.709 -15.153 1.00 1.43 C
ATOM 7 C4' C A1400 -97.082 25.917 -14.452 1.00 1.43 C
ATOM 8 O4' C A1400 -97.315 26.155 -13.035 1.00 1.43 O
ATOM 9 C3' C A1400 -96.120 24.749 -14.468 1.00 1.43 C
ATOM 10 O3' C A1400 -95.433 24.606 -15.696 1.00 1.43 O
ATOM 11 C2' C A1400 -95.219 25.076 -13.287 1.00 1.43 C
ATOM 12 O2' C A1400 -94.302 26.112 -13.623 1.00 1.43 O
ATOM 13 C1' C A1400 -96.243 25.628 -12.287 1.00 1.43 C
ATOM 14 N1 C A1400 -96.783 24.576 -11.371 1.00 1.69 N
ATOM 15 C2 C A1400 -95.929 23.964 -10.452 1.00 1.69 C
ATOM 16 O2 C A1400 -94.742 24.283 -10.441 1.00 1.69 O
ATOM 17 N3 C A1400 -96.375 23.034 -9.598 1.00 1.69 N
ATOM 18 C4 C A1400 -97.643 22.686 -9.608 1.00 1.69 C
ATOM 19 N4 C A1400 -98.018 21.746 -8.719 1.00 1.69 N
ATOM 20 C5 C A1400 -98.553 23.294 -10.532 1.00 1.69 C
ATOM 21 C6 C A1400 -98.099 24.226 -11.381 1.00 1.69 C
ATOM 22 P C A1401 -95.163 23.130 -16.308 1.00 9.62 P
ATOM 23 OP1 C A1401 -94.343 23.314 -17.531 1.00 9.62 O
ATOM 24 OP2 C A1401 -96.474 22.432 -16.422 1.00 9.62 O
ATOM 25 O5' C A1401 -94.302 22.424 -15.171 1.00 9.62 O
TER
ATOM 1 O3' A B1497 -88.069 21.240 -1.934 1.00 10.18 O
ATOM 2 P A B1498 -88.626 22.730 -1.955 1.00 0.66 P
ATOM 3 OP1 A B1498 -87.804 23.501 -0.984 1.00 0.66 O
ATOM 4 OP2 A B1498 -90.081 22.652 -1.745 1.00 0.66 O
ATOM 5 O5' A B1498 -88.313 23.186 -3.449 1.00 0.66 O
ATOM 6 C5' A B1498 -86.979 23.213 -3.931 1.00 0.66 C
ATOM 7 C4' A B1498 -86.907 23.823 -5.301 1.00 0.66 C
ATOM 8 O4' A B1498 -87.501 22.926 -6.268 1.00 0.66 O
ATOM 9 C3' A B1498 -87.678 25.107 -5.475 1.00 0.66 C
ATOM 10 O3' A B1498 -86.951 26.230 -5.054 1.00 0.66 O
ATOM 11 C2' A B1498 -87.990 25.111 -6.956 1.00 0.66 C
ATOM 12 O2' A B1498 -86.861 25.476 -7.704 1.00 0.66 O
ATOM 13 C1' A B1498 -88.256 23.654 -7.203 1.00 0.66 C
ATOM 14 N9 A B1498 -89.661 23.340 -6.998 1.00 0.73 N
ATOM 15 C8 A B1498 -90.247 22.785 -5.907 1.00 0.73 C
ATOM 16 N7 A B1498 -91.537 22.636 -6.059 1.00 0.73 N
ATOM 17 C5 A B1498 -91.780 23.142 -7.318 1.00 0.73 C
ATOM 18 C6 A B1498 -92.951 23.275 -8.048 1.00 0.73 C
ATOM 19 N6 A B1498 -94.138 22.887 -7.596 1.00 0.73 N
ATOM 20 N1 A B1498 -92.861 23.822 -9.257 1.00 0.73 N
ATOM 21 C2 A B1498 -91.657 24.202 -9.694 1.00 0.73 C
ATOM 22 N3 A B1498 -90.474 24.128 -9.094 1.00 0.73 N
ATOM 23 C4 A B1498 -90.629 23.580 -7.896 1.00 0.73 C
ATOM 24 P C B1499 -87.713 27.470 -4.408 1.00 2.87 P
ATOM 25 OP1 C B1499 -86.656 28.474 -4.027 1.00 2.87 O
ATOM 26 OP2 C B1499 -88.592 26.927 -3.354 1.00 2.87 O
ATOM 27 O5' C B1499 -88.588 28.022 -5.637 1.00 2.87 O
TER
Atoms:
C2: (-95.929,23.964,-10.452)
OP1: (-100.752,24.496,-16.396)
OP2: (-101.423,23.604,-14.106)
C4: (-97.643,22.686,-9.608)
O5': (-99.248,24.853,-14.428)
C3': (-96.120,24.749,-14.468)
C1': (-96.243,25.628,-12.287)
O4': (-97.315,26.155,-13.035)
C5': (-98.388,25.709,-15.153)
P: (-100.736,24.642,-14.925)
O2: (-94.742,24.283,-10.441)
C4': (-97.082,25.917,-14.452)
C2': (-95.219,25.076,-13.287)
O2': (-94.302,26.112,-13.623)
N1: (-96.783,24.576,-11.371)
N3: (-96.375,23.034,-9.598)
N4: (-98.018,21.746,-8.719)
C6: (-98.099,24.226,-11.381)
C5: (-98.553,23.294,-10.532)
O3': (-95.433,24.606,-15.696)
OP1: (-100.752,24.496,-16.396)
OP2: (-101.423,23.604,-14.106)
C4: (-97.643,22.686,-9.608)
O5': (-99.248,24.853,-14.428)
C3': (-96.120,24.749,-14.468)
C1': (-96.243,25.628,-12.287)
O4': (-97.315,26.155,-13.035)
C5': (-98.388,25.709,-15.153)
P: (-100.736,24.642,-14.925)
O2: (-94.742,24.283,-10.441)
C4': (-97.082,25.917,-14.452)
C2': (-95.219,25.076,-13.287)
O2': (-94.302,26.112,-13.623)
N1: (-96.783,24.576,-11.371)
N3: (-96.375,23.034,-9.598)
N4: (-98.018,21.746,-8.719)
C6: (-98.099,24.226,-11.381)
C5: (-98.553,23.294,-10.532)
O3': (-95.433,24.606,-15.696)
OP1: (-87.804,23.501,-0.984)
OP2: (-90.081,22.652,-1.745)
C3': (-87.678,25.107,-5.475)
C1': (-88.256,23.654,-7.203)
C5': (-86.979,23.213,-3.931)
O4': (-87.501,22.926,-6.268)
C8: (-90.247,22.785,-5.907)
O2': (-86.861,25.476,-7.704)
C6: (-92.951,23.275,-8.048)
C5: (-91.780,23.142,-7.318)
C4: (-90.629,23.580,-7.896)
P: (-88.626,22.730,-1.955)
C4': (-86.907,23.823,-5.301)
C2': (-87.990,25.111,-6.956)
C2: (-91.657,24.202,-9.694)
N1: (-92.861,23.822,-9.257)
N3: (-90.474,24.128,-9.094)
N6: (-94.138,22.887,-7.596)
N7: (-91.537,22.636,-6.059)
N9: (-89.661,23.340,-6.998)
O5': (-88.313,23.186,-3.449)
O3': (-86.951,26.230,-5.054)
OP2: (-90.081,22.652,-1.745)
C3': (-87.678,25.107,-5.475)
C1': (-88.256,23.654,-7.203)
C5': (-86.979,23.213,-3.931)
O4': (-87.501,22.926,-6.268)
C8: (-90.247,22.785,-5.907)
O2': (-86.861,25.476,-7.704)
C6: (-92.951,23.275,-8.048)
C5: (-91.780,23.142,-7.318)
C4: (-90.629,23.580,-7.896)
P: (-88.626,22.730,-1.955)
C4': (-86.907,23.823,-5.301)
C2': (-87.990,25.111,-6.956)
C2: (-91.657,24.202,-9.694)
N1: (-92.861,23.822,-9.257)
N3: (-90.474,24.128,-9.094)
N6: (-94.138,22.887,-7.596)
N7: (-91.537,22.636,-6.059)
N9: (-89.661,23.340,-6.998)
O5': (-88.313,23.186,-3.449)
O3': (-86.951,26.230,-5.054)
Image (generated by PyMOL):