Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D21:D22
Extra
PDB:
ATOM 1 O3' A A 20 -2.762 0.383 -60.985 1.00 50.57 O
ATOM 2 P U A 21 -3.692 1.670 -61.232 1.00 60.47 P
ATOM 3 OP1 U A 21 -4.316 2.013 -59.929 1.00 57.17 O
ATOM 4 OP2 U A 21 -4.572 1.360 -62.383 1.00 58.00 O
ATOM 5 O5' U A 21 -2.641 2.795 -61.640 1.00 55.81 O
ATOM 6 C5' U A 21 -1.583 2.517 -62.553 1.00 56.17 C
ATOM 7 C4' U A 21 -0.829 3.769 -62.923 1.00 58.12 C
ATOM 8 O4' U A 21 -1.609 4.930 -62.516 1.00 57.83 O
ATOM 9 C3' U A 21 0.541 3.928 -62.261 1.00 57.76 C
ATOM 10 O3' U A 21 1.401 4.643 -63.153 1.00 52.39 O
ATOM 11 C2' U A 21 0.207 4.789 -61.046 1.00 58.76 C
ATOM 12 O2' U A 21 1.294 5.498 -60.493 1.00 60.41 O
ATOM 13 C1' U A 21 -0.849 5.723 -61.623 1.00 59.41 C
ATOM 14 N1 U A 21 -1.760 6.288 -60.609 1.00 57.99 N
ATOM 15 C2 U A 21 -1.657 7.639 -60.342 1.00 55.77 C
ATOM 16 O2 U A 21 -0.865 8.365 -60.918 1.00 53.41 O
ATOM 17 N3 U A 21 -2.522 8.105 -59.383 1.00 54.05 N
ATOM 18 C4 U A 21 -3.452 7.366 -58.676 1.00 57.82 C
ATOM 19 O4 U A 21 -4.166 7.922 -57.840 1.00 56.32 O
ATOM 20 C5 U A 21 -3.488 5.974 -59.007 1.00 57.98 C
ATOM 21 C6 U A 21 -2.658 5.494 -59.937 1.00 59.78 C
ATOM 22 P A A 22 2.815 5.234 -62.660 1.00 55.71 P
ATOM 23 OP1 A A 22 2.559 6.599 -62.140 1.00 59.59 O
ATOM 24 OP2 A A 22 3.768 5.072 -63.781 1.00 53.92 O
ATOM 25 O5' A A 22 3.223 4.266 -61.462 1.00 50.09 O
TER
ATOM 1 O3' U B 21 1.401 4.643 -63.153 1.00 52.39 O
ATOM 2 P A B 22 2.815 5.234 -62.660 1.00 55.71 P
ATOM 3 OP1 A B 22 2.559 6.599 -62.140 1.00 59.59 O
ATOM 4 OP2 A B 22 3.768 5.072 -63.781 1.00 53.92 O
ATOM 5 O5' A B 22 3.223 4.266 -61.462 1.00 50.09 O
ATOM 6 C5' A B 22 4.111 4.710 -60.445 1.00 47.25 C
ATOM 7 C4' A B 22 4.912 3.572 -59.858 1.00 44.72 C
ATOM 8 O4' A B 22 4.022 2.529 -59.385 1.00 47.01 O
ATOM 9 C3' A B 22 5.854 2.846 -60.807 1.00 46.13 C
ATOM 10 O3' A B 22 7.072 3.541 -61.014 1.00 47.30 O
ATOM 11 C2' A B 22 6.034 1.497 -60.124 1.00 44.75 C
ATOM 12 O2' A B 22 6.969 1.595 -59.061 1.00 44.98 O
ATOM 13 C1' A B 22 4.645 1.269 -59.525 1.00 46.26 C
ATOM 14 N9 A B 22 3.804 0.418 -60.386 1.00 43.21 N
ATOM 15 C8 A B 22 3.074 0.776 -61.492 1.00 43.56 C
ATOM 16 N7 A B 22 2.427 -0.225 -62.040 1.00 43.84 N
ATOM 17 C5 A B 22 2.754 -1.311 -61.239 1.00 41.72 C
ATOM 18 C6 A B 22 2.389 -2.668 -61.286 1.00 42.96 C
ATOM 19 N6 A B 22 1.580 -3.188 -62.211 1.00 41.72 N
ATOM 20 N1 A B 22 2.891 -3.486 -60.336 1.00 41.27 N
ATOM 21 C2 A B 22 3.702 -2.967 -59.405 1.00 33.25 C
ATOM 22 N3 A B 22 4.115 -1.713 -59.255 1.00 35.53 N
ATOM 23 C4 A B 22 3.599 -0.928 -60.215 1.00 39.75 C
ATOM 24 P G B 23 7.988 3.211 -62.293 1.00 43.02 P
ATOM 25 OP1 G B 23 9.182 4.087 -62.214 1.00 57.79 O
ATOM 26 OP2 G B 23 7.116 3.303 -63.488 1.00 44.20 O
ATOM 27 O5' G B 23 8.411 1.695 -62.048 1.00 48.58 O
TER
ATOM 2 P U A 21 -3.692 1.670 -61.232 1.00 60.47 P
ATOM 3 OP1 U A 21 -4.316 2.013 -59.929 1.00 57.17 O
ATOM 4 OP2 U A 21 -4.572 1.360 -62.383 1.00 58.00 O
ATOM 5 O5' U A 21 -2.641 2.795 -61.640 1.00 55.81 O
ATOM 6 C5' U A 21 -1.583 2.517 -62.553 1.00 56.17 C
ATOM 7 C4' U A 21 -0.829 3.769 -62.923 1.00 58.12 C
ATOM 8 O4' U A 21 -1.609 4.930 -62.516 1.00 57.83 O
ATOM 9 C3' U A 21 0.541 3.928 -62.261 1.00 57.76 C
ATOM 10 O3' U A 21 1.401 4.643 -63.153 1.00 52.39 O
ATOM 11 C2' U A 21 0.207 4.789 -61.046 1.00 58.76 C
ATOM 12 O2' U A 21 1.294 5.498 -60.493 1.00 60.41 O
ATOM 13 C1' U A 21 -0.849 5.723 -61.623 1.00 59.41 C
ATOM 14 N1 U A 21 -1.760 6.288 -60.609 1.00 57.99 N
ATOM 15 C2 U A 21 -1.657 7.639 -60.342 1.00 55.77 C
ATOM 16 O2 U A 21 -0.865 8.365 -60.918 1.00 53.41 O
ATOM 17 N3 U A 21 -2.522 8.105 -59.383 1.00 54.05 N
ATOM 18 C4 U A 21 -3.452 7.366 -58.676 1.00 57.82 C
ATOM 19 O4 U A 21 -4.166 7.922 -57.840 1.00 56.32 O
ATOM 20 C5 U A 21 -3.488 5.974 -59.007 1.00 57.98 C
ATOM 21 C6 U A 21 -2.658 5.494 -59.937 1.00 59.78 C
ATOM 22 P A A 22 2.815 5.234 -62.660 1.00 55.71 P
ATOM 23 OP1 A A 22 2.559 6.599 -62.140 1.00 59.59 O
ATOM 24 OP2 A A 22 3.768 5.072 -63.781 1.00 53.92 O
ATOM 25 O5' A A 22 3.223 4.266 -61.462 1.00 50.09 O
TER
ATOM 1 O3' U B 21 1.401 4.643 -63.153 1.00 52.39 O
ATOM 2 P A B 22 2.815 5.234 -62.660 1.00 55.71 P
ATOM 3 OP1 A B 22 2.559 6.599 -62.140 1.00 59.59 O
ATOM 4 OP2 A B 22 3.768 5.072 -63.781 1.00 53.92 O
ATOM 5 O5' A B 22 3.223 4.266 -61.462 1.00 50.09 O
ATOM 6 C5' A B 22 4.111 4.710 -60.445 1.00 47.25 C
ATOM 7 C4' A B 22 4.912 3.572 -59.858 1.00 44.72 C
ATOM 8 O4' A B 22 4.022 2.529 -59.385 1.00 47.01 O
ATOM 9 C3' A B 22 5.854 2.846 -60.807 1.00 46.13 C
ATOM 10 O3' A B 22 7.072 3.541 -61.014 1.00 47.30 O
ATOM 11 C2' A B 22 6.034 1.497 -60.124 1.00 44.75 C
ATOM 12 O2' A B 22 6.969 1.595 -59.061 1.00 44.98 O
ATOM 13 C1' A B 22 4.645 1.269 -59.525 1.00 46.26 C
ATOM 14 N9 A B 22 3.804 0.418 -60.386 1.00 43.21 N
ATOM 15 C8 A B 22 3.074 0.776 -61.492 1.00 43.56 C
ATOM 16 N7 A B 22 2.427 -0.225 -62.040 1.00 43.84 N
ATOM 17 C5 A B 22 2.754 -1.311 -61.239 1.00 41.72 C
ATOM 18 C6 A B 22 2.389 -2.668 -61.286 1.00 42.96 C
ATOM 19 N6 A B 22 1.580 -3.188 -62.211 1.00 41.72 N
ATOM 20 N1 A B 22 2.891 -3.486 -60.336 1.00 41.27 N
ATOM 21 C2 A B 22 3.702 -2.967 -59.405 1.00 33.25 C
ATOM 22 N3 A B 22 4.115 -1.713 -59.255 1.00 35.53 N
ATOM 23 C4 A B 22 3.599 -0.928 -60.215 1.00 39.75 C
ATOM 24 P G B 23 7.988 3.211 -62.293 1.00 43.02 P
ATOM 25 OP1 G B 23 9.182 4.087 -62.214 1.00 57.79 O
ATOM 26 OP2 G B 23 7.116 3.303 -63.488 1.00 44.20 O
ATOM 27 O5' G B 23 8.411 1.695 -62.048 1.00 48.58 O
TER
Atoms:
C4: (-3.452,7.366,-58.676)
N3: (-2.522,8.105,-59.383)
OP1: (-4.316,2.013,-59.929)
OP2: (-4.572,1.360,-62.383)
C2: (-1.657,7.639,-60.342)
C1': (-0.849,5.723,-61.623)
C3': (0.541,3.928,-62.261)
O5': (-2.641,2.795,-61.640)
O4': (-1.609,4.930,-62.516)
C5': (-1.583,2.517,-62.553)
P: (-3.692,1.670,-61.232)
C4': (-0.829,3.769,-62.923)
C2': (0.207,4.789,-61.046)
O2': (1.294,5.498,-60.493)
N1: (-1.760,6.288,-60.609)
O4: (-4.166,7.922,-57.840)
O2: (-0.865,8.365,-60.918)
C6: (-2.658,5.494,-59.937)
C5: (-3.488,5.974,-59.007)
O3': (1.401,4.643,-63.153)
N3: (-2.522,8.105,-59.383)
OP1: (-4.316,2.013,-59.929)
OP2: (-4.572,1.360,-62.383)
C2: (-1.657,7.639,-60.342)
C1': (-0.849,5.723,-61.623)
C3': (0.541,3.928,-62.261)
O5': (-2.641,2.795,-61.640)
O4': (-1.609,4.930,-62.516)
C5': (-1.583,2.517,-62.553)
P: (-3.692,1.670,-61.232)
C4': (-0.829,3.769,-62.923)
C2': (0.207,4.789,-61.046)
O2': (1.294,5.498,-60.493)
N1: (-1.760,6.288,-60.609)
O4: (-4.166,7.922,-57.840)
O2: (-0.865,8.365,-60.918)
C6: (-2.658,5.494,-59.937)
C5: (-3.488,5.974,-59.007)
O3': (1.401,4.643,-63.153)
OP1: (2.559,6.599,-62.140)
OP2: (3.768,5.072,-63.781)
C3': (5.854,2.846,-60.807)
C1': (4.645,1.269,-59.525)
C5': (4.111,4.710,-60.445)
O4': (4.022,2.529,-59.385)
C8: (3.074,0.776,-61.492)
O2': (6.969,1.595,-59.061)
C6: (2.389,-2.668,-61.286)
C5: (2.754,-1.311,-61.239)
C4: (3.599,-0.928,-60.215)
P: (2.815,5.234,-62.660)
C4': (4.912,3.572,-59.858)
C2': (6.034,1.497,-60.124)
C2: (3.702,-2.967,-59.405)
N1: (2.891,-3.486,-60.336)
N3: (4.115,-1.713,-59.255)
N6: (1.580,-3.188,-62.211)
N7: (2.427,-0.225,-62.040)
N9: (3.804,0.418,-60.386)
O5': (3.223,4.266,-61.462)
O3': (7.072,3.541,-61.014)
OP2: (3.768,5.072,-63.781)
C3': (5.854,2.846,-60.807)
C1': (4.645,1.269,-59.525)
C5': (4.111,4.710,-60.445)
O4': (4.022,2.529,-59.385)
C8: (3.074,0.776,-61.492)
O2': (6.969,1.595,-59.061)
C6: (2.389,-2.668,-61.286)
C5: (2.754,-1.311,-61.239)
C4: (3.599,-0.928,-60.215)
P: (2.815,5.234,-62.660)
C4': (4.912,3.572,-59.858)
C2': (6.034,1.497,-60.124)
C2: (3.702,-2.967,-59.405)
N1: (2.891,-3.486,-60.336)
N3: (4.115,-1.713,-59.255)
N6: (1.580,-3.188,-62.211)
N7: (2.427,-0.225,-62.040)
N9: (3.804,0.418,-60.386)
O5': (3.223,4.266,-61.462)
O3': (7.072,3.541,-61.014)
Image (generated by PyMOL):