Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1538:1539
Extra
PDB:
ATOM 1 O3' C A 537 109.279 -23.924 30.033 1.00 50.83 O
ATOM 2 P U A 538 107.864 -24.243 29.392 1.00 62.06 P
ATOM 3 OP1 U A 538 107.999 -24.030 27.927 1.00 62.35 O
ATOM 4 OP2 U A 538 106.859 -23.461 30.158 1.00 61.55 O
ATOM 5 O5' U A 538 107.668 -25.778 29.699 1.00 62.16 O
ATOM 6 C5' U A 538 108.771 -26.654 29.729 1.00 62.59 C
ATOM 7 C4' U A 538 108.456 -27.894 30.496 1.00 62.56 C
ATOM 8 O4' U A 538 108.368 -27.571 31.902 1.00 62.24 O
ATOM 9 C3' U A 538 107.143 -28.571 30.118 1.00 62.37 C
ATOM 10 O3' U A 538 107.372 -29.934 29.782 1.00 62.72 O
ATOM 11 C2' U A 538 106.288 -28.476 31.384 1.00 61.89 C
ATOM 12 O2' U A 538 105.482 -29.600 31.632 1.00 61.81 O
ATOM 13 C1' U A 538 107.316 -28.290 32.480 1.00 61.96 C
ATOM 14 N1 U A 538 106.806 -27.530 33.592 1.00 61.52 N
ATOM 15 C2 U A 538 106.598 -28.123 34.808 1.00 61.36 C
ATOM 16 O2 U A 538 106.869 -29.284 35.035 1.00 61.58 O
ATOM 17 N3 U A 538 106.083 -27.312 35.787 1.00 60.95 N
ATOM 18 C4 U A 538 105.743 -25.983 35.643 1.00 60.68 C
ATOM 19 O4 U A 538 105.252 -25.344 36.582 1.00 60.32 O
ATOM 20 C5 U A 538 105.989 -25.462 34.329 1.00 60.87 C
ATOM 21 C6 U A 538 106.484 -26.238 33.364 1.00 61.27 C
ATOM 22 P G A 539 107.147 -30.417 28.260 1.00 58.63 P
ATOM 23 OP1 G A 539 107.460 -31.869 28.196 1.00 58.99 O
ATOM 24 OP2 G A 539 107.901 -29.465 27.361 1.00 58.86 O
ATOM 25 O5' G A 539 105.590 -30.226 28.087 1.00 58.21 O
TER
ATOM 1 O3' U B 538 107.372 -29.934 29.782 1.00 62.72 O
ATOM 2 P G B 539 107.147 -30.417 28.260 1.00 58.63 P
ATOM 3 OP1 G B 539 107.460 -31.869 28.196 1.00 58.99 O
ATOM 4 OP2 G B 539 107.901 -29.465 27.361 1.00 58.86 O
ATOM 5 O5' G B 539 105.590 -30.226 28.087 1.00 58.21 O
ATOM 6 C5' G B 539 104.701 -31.033 28.810 1.00 57.97 C
ATOM 7 C4' G B 539 103.314 -30.872 28.301 1.00 57.68 C
ATOM 8 O4' G B 539 102.848 -29.541 28.575 1.00 57.29 O
ATOM 9 C3' G B 539 103.125 -31.035 26.799 1.00 57.97 C
ATOM 10 O3' G B 539 103.047 -32.399 26.426 1.00 58.27 O
ATOM 11 C2' G B 539 101.822 -30.301 26.577 1.00 57.56 C
ATOM 12 O2' G B 539 100.754 -31.133 26.971 1.00 57.36 O
ATOM 13 C1' G B 539 101.925 -29.162 27.588 1.00 57.19 C
ATOM 14 N9 G B 539 102.381 -27.915 26.988 1.00 57.23 N
ATOM 15 C8 G B 539 103.618 -27.423 27.152 1.00 57.43 C
ATOM 16 N7 G B 539 103.787 -26.286 26.575 1.00 57.42 N
ATOM 17 C5 G B 539 102.565 -26.013 25.993 1.00 57.19 C
ATOM 18 C6 G B 539 102.154 -24.903 25.214 1.00 57.10 C
ATOM 19 O6 G B 539 102.790 -23.909 24.860 1.00 57.20 O
ATOM 20 N1 G B 539 100.845 -25.018 24.810 1.00 56.89 N
ATOM 21 C2 G B 539 100.031 -26.057 25.144 1.00 56.76 C
ATOM 22 N2 G B 539 98.795 -25.960 24.650 1.00 56.57 N
ATOM 23 N3 G B 539 100.398 -27.095 25.880 1.00 56.84 N
ATOM 24 C4 G B 539 101.680 -27.010 26.260 1.00 57.06 C
ATOM 25 P C B 540 103.329 -32.877 24.930 1.00 55.79 P
ATOM 26 OP1 C B 540 103.053 -34.328 24.891 1.00 56.00 O
ATOM 27 OP2 C B 540 104.660 -32.405 24.568 1.00 56.12 O
ATOM 28 O5' C B 540 102.242 -32.110 24.090 1.00 55.56 O
TER
ATOM 2 P U A 538 107.864 -24.243 29.392 1.00 62.06 P
ATOM 3 OP1 U A 538 107.999 -24.030 27.927 1.00 62.35 O
ATOM 4 OP2 U A 538 106.859 -23.461 30.158 1.00 61.55 O
ATOM 5 O5' U A 538 107.668 -25.778 29.699 1.00 62.16 O
ATOM 6 C5' U A 538 108.771 -26.654 29.729 1.00 62.59 C
ATOM 7 C4' U A 538 108.456 -27.894 30.496 1.00 62.56 C
ATOM 8 O4' U A 538 108.368 -27.571 31.902 1.00 62.24 O
ATOM 9 C3' U A 538 107.143 -28.571 30.118 1.00 62.37 C
ATOM 10 O3' U A 538 107.372 -29.934 29.782 1.00 62.72 O
ATOM 11 C2' U A 538 106.288 -28.476 31.384 1.00 61.89 C
ATOM 12 O2' U A 538 105.482 -29.600 31.632 1.00 61.81 O
ATOM 13 C1' U A 538 107.316 -28.290 32.480 1.00 61.96 C
ATOM 14 N1 U A 538 106.806 -27.530 33.592 1.00 61.52 N
ATOM 15 C2 U A 538 106.598 -28.123 34.808 1.00 61.36 C
ATOM 16 O2 U A 538 106.869 -29.284 35.035 1.00 61.58 O
ATOM 17 N3 U A 538 106.083 -27.312 35.787 1.00 60.95 N
ATOM 18 C4 U A 538 105.743 -25.983 35.643 1.00 60.68 C
ATOM 19 O4 U A 538 105.252 -25.344 36.582 1.00 60.32 O
ATOM 20 C5 U A 538 105.989 -25.462 34.329 1.00 60.87 C
ATOM 21 C6 U A 538 106.484 -26.238 33.364 1.00 61.27 C
ATOM 22 P G A 539 107.147 -30.417 28.260 1.00 58.63 P
ATOM 23 OP1 G A 539 107.460 -31.869 28.196 1.00 58.99 O
ATOM 24 OP2 G A 539 107.901 -29.465 27.361 1.00 58.86 O
ATOM 25 O5' G A 539 105.590 -30.226 28.087 1.00 58.21 O
TER
ATOM 1 O3' U B 538 107.372 -29.934 29.782 1.00 62.72 O
ATOM 2 P G B 539 107.147 -30.417 28.260 1.00 58.63 P
ATOM 3 OP1 G B 539 107.460 -31.869 28.196 1.00 58.99 O
ATOM 4 OP2 G B 539 107.901 -29.465 27.361 1.00 58.86 O
ATOM 5 O5' G B 539 105.590 -30.226 28.087 1.00 58.21 O
ATOM 6 C5' G B 539 104.701 -31.033 28.810 1.00 57.97 C
ATOM 7 C4' G B 539 103.314 -30.872 28.301 1.00 57.68 C
ATOM 8 O4' G B 539 102.848 -29.541 28.575 1.00 57.29 O
ATOM 9 C3' G B 539 103.125 -31.035 26.799 1.00 57.97 C
ATOM 10 O3' G B 539 103.047 -32.399 26.426 1.00 58.27 O
ATOM 11 C2' G B 539 101.822 -30.301 26.577 1.00 57.56 C
ATOM 12 O2' G B 539 100.754 -31.133 26.971 1.00 57.36 O
ATOM 13 C1' G B 539 101.925 -29.162 27.588 1.00 57.19 C
ATOM 14 N9 G B 539 102.381 -27.915 26.988 1.00 57.23 N
ATOM 15 C8 G B 539 103.618 -27.423 27.152 1.00 57.43 C
ATOM 16 N7 G B 539 103.787 -26.286 26.575 1.00 57.42 N
ATOM 17 C5 G B 539 102.565 -26.013 25.993 1.00 57.19 C
ATOM 18 C6 G B 539 102.154 -24.903 25.214 1.00 57.10 C
ATOM 19 O6 G B 539 102.790 -23.909 24.860 1.00 57.20 O
ATOM 20 N1 G B 539 100.845 -25.018 24.810 1.00 56.89 N
ATOM 21 C2 G B 539 100.031 -26.057 25.144 1.00 56.76 C
ATOM 22 N2 G B 539 98.795 -25.960 24.650 1.00 56.57 N
ATOM 23 N3 G B 539 100.398 -27.095 25.880 1.00 56.84 N
ATOM 24 C4 G B 539 101.680 -27.010 26.260 1.00 57.06 C
ATOM 25 P C B 540 103.329 -32.877 24.930 1.00 55.79 P
ATOM 26 OP1 C B 540 103.053 -34.328 24.891 1.00 56.00 O
ATOM 27 OP2 C B 540 104.660 -32.405 24.568 1.00 56.12 O
ATOM 28 O5' C B 540 102.242 -32.110 24.090 1.00 55.56 O
TER
Atoms:
C4: (105.743,-25.983,35.643)
N3: (106.083,-27.312,35.787)
OP1: (107.999,-24.030,27.927)
OP2: (106.859,-23.461,30.158)
C2: (106.598,-28.123,34.808)
C1': (107.316,-28.290,32.480)
C3': (107.143,-28.571,30.118)
O5': (107.668,-25.778,29.699)
O4': (108.368,-27.571,31.902)
C5': (108.771,-26.654,29.729)
P: (107.864,-24.243,29.392)
C4': (108.456,-27.894,30.496)
C2': (106.288,-28.476,31.384)
O2': (105.482,-29.600,31.632)
N1: (106.806,-27.530,33.592)
O4: (105.252,-25.344,36.582)
O2: (106.869,-29.284,35.035)
C6: (106.484,-26.238,33.364)
C5: (105.989,-25.462,34.329)
O3': (107.372,-29.934,29.782)
N3: (106.083,-27.312,35.787)
OP1: (107.999,-24.030,27.927)
OP2: (106.859,-23.461,30.158)
C2: (106.598,-28.123,34.808)
C1': (107.316,-28.290,32.480)
C3': (107.143,-28.571,30.118)
O5': (107.668,-25.778,29.699)
O4': (108.368,-27.571,31.902)
C5': (108.771,-26.654,29.729)
P: (107.864,-24.243,29.392)
C4': (108.456,-27.894,30.496)
C2': (106.288,-28.476,31.384)
O2': (105.482,-29.600,31.632)
N1: (106.806,-27.530,33.592)
O4: (105.252,-25.344,36.582)
O2: (106.869,-29.284,35.035)
C6: (106.484,-26.238,33.364)
C5: (105.989,-25.462,34.329)
O3': (107.372,-29.934,29.782)
OP1: (107.460,-31.869,28.196)
OP2: (107.901,-29.465,27.361)
C3': (103.125,-31.035,26.799)
C1': (101.925,-29.162,27.588)
C5': (104.701,-31.033,28.810)
O6: (102.790,-23.909,24.860)
O4': (102.848,-29.541,28.575)
C8: (103.618,-27.423,27.152)
C2: (100.031,-26.057,25.144)
C6: (102.154,-24.903,25.214)
C5: (102.565,-26.013,25.993)
C4: (101.680,-27.010,26.260)
P: (107.147,-30.417,28.260)
C4': (103.314,-30.872,28.301)
C2': (101.822,-30.301,26.577)
O2': (100.754,-31.133,26.971)
N1: (100.845,-25.018,24.810)
N2: (98.795,-25.960,24.650)
N3: (100.398,-27.095,25.880)
N7: (103.787,-26.286,26.575)
N9: (102.381,-27.915,26.988)
O5': (105.590,-30.226,28.087)
O3': (103.047,-32.399,26.426)
OP2: (107.901,-29.465,27.361)
C3': (103.125,-31.035,26.799)
C1': (101.925,-29.162,27.588)
C5': (104.701,-31.033,28.810)
O6: (102.790,-23.909,24.860)
O4': (102.848,-29.541,28.575)
C8: (103.618,-27.423,27.152)
C2: (100.031,-26.057,25.144)
C6: (102.154,-24.903,25.214)
C5: (102.565,-26.013,25.993)
C4: (101.680,-27.010,26.260)
P: (107.147,-30.417,28.260)
C4': (103.314,-30.872,28.301)
C2': (101.822,-30.301,26.577)
O2': (100.754,-31.133,26.971)
N1: (100.845,-25.018,24.810)
N2: (98.795,-25.960,24.650)
N3: (100.398,-27.095,25.880)
N7: (103.787,-26.286,26.575)
N9: (102.381,-27.915,26.988)
O5': (105.590,-30.226,28.087)
O3': (103.047,-32.399,26.426)
Image (generated by PyMOL):