Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:030:0429
Extra
PDB:
ATOM 1 O3' G A 29 48.038 124.633 22.828 1.00 47.91 O
ATOM 2 P C A 30 49.563 124.421 22.357 1.00 48.63 P
ATOM 3 OP1 C A 30 49.533 124.477 20.881 1.00 50.02 O
ATOM 4 OP2 C A 30 50.132 123.226 23.029 1.00 47.53 O
ATOM 5 O5' C A 30 50.342 125.705 22.896 1.00 49.15 O
ATOM 6 C5' C A 30 49.980 127.042 22.478 1.00 48.94 C
ATOM 7 C4' C A 30 50.618 128.069 23.393 1.00 48.18 C
ATOM 8 O4' C A 30 50.165 127.839 24.755 1.00 49.13 O
ATOM 9 C3' C A 30 52.135 128.017 23.478 1.00 48.09 C
ATOM 10 O3' C A 30 52.745 128.778 22.437 1.00 46.81 O
ATOM 11 C2' C A 30 52.413 128.603 24.857 1.00 48.39 C
ATOM 12 O2' C A 30 52.376 130.015 24.870 1.00 48.18 O
ATOM 13 C1' C A 30 51.236 128.048 25.665 1.00 48.96 C
ATOM 14 N1 C A 30 51.524 126.765 26.343 1.00 49.31 N
ATOM 15 C2 C A 30 52.104 126.772 27.626 1.00 48.77 C
ATOM 16 O2 C A 30 52.375 127.856 28.166 1.00 48.03 O
ATOM 17 N3 C A 30 52.354 125.594 28.241 1.00 49.75 N
ATOM 18 C4 C A 30 52.058 124.443 27.628 1.00 50.94 C
ATOM 19 N4 C A 30 52.324 123.303 28.267 1.00 51.08 N
ATOM 20 C5 C A 30 51.476 124.408 26.331 1.00 50.75 C
ATOM 21 C6 C A 30 51.229 125.577 25.731 1.00 49.83 C
ATOM 22 P G A 31 54.290 128.530 22.063 1.00 46.15 P
ATOM 23 OP1 G A 31 54.666 129.560 21.065 1.00 46.61 O
ATOM 24 OP2 G A 31 54.484 127.094 21.742 1.00 45.98 O
ATOM 25 O5' G A 31 55.076 128.841 23.412 1.00 45.58 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
ATOM 2 P C A 30 49.563 124.421 22.357 1.00 48.63 P
ATOM 3 OP1 C A 30 49.533 124.477 20.881 1.00 50.02 O
ATOM 4 OP2 C A 30 50.132 123.226 23.029 1.00 47.53 O
ATOM 5 O5' C A 30 50.342 125.705 22.896 1.00 49.15 O
ATOM 6 C5' C A 30 49.980 127.042 22.478 1.00 48.94 C
ATOM 7 C4' C A 30 50.618 128.069 23.393 1.00 48.18 C
ATOM 8 O4' C A 30 50.165 127.839 24.755 1.00 49.13 O
ATOM 9 C3' C A 30 52.135 128.017 23.478 1.00 48.09 C
ATOM 10 O3' C A 30 52.745 128.778 22.437 1.00 46.81 O
ATOM 11 C2' C A 30 52.413 128.603 24.857 1.00 48.39 C
ATOM 12 O2' C A 30 52.376 130.015 24.870 1.00 48.18 O
ATOM 13 C1' C A 30 51.236 128.048 25.665 1.00 48.96 C
ATOM 14 N1 C A 30 51.524 126.765 26.343 1.00 49.31 N
ATOM 15 C2 C A 30 52.104 126.772 27.626 1.00 48.77 C
ATOM 16 O2 C A 30 52.375 127.856 28.166 1.00 48.03 O
ATOM 17 N3 C A 30 52.354 125.594 28.241 1.00 49.75 N
ATOM 18 C4 C A 30 52.058 124.443 27.628 1.00 50.94 C
ATOM 19 N4 C A 30 52.324 123.303 28.267 1.00 51.08 N
ATOM 20 C5 C A 30 51.476 124.408 26.331 1.00 50.75 C
ATOM 21 C6 C A 30 51.229 125.577 25.731 1.00 49.83 C
ATOM 22 P G A 31 54.290 128.530 22.063 1.00 46.15 P
ATOM 23 OP1 G A 31 54.666 129.560 21.065 1.00 46.61 O
ATOM 24 OP2 G A 31 54.484 127.094 21.742 1.00 45.98 O
ATOM 25 O5' G A 31 55.076 128.841 23.412 1.00 45.58 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
Atoms:
C2: (52.104,126.772,27.626)
OP1: (49.533,124.477,20.881)
OP2: (50.132,123.226,23.029)
C4: (52.058,124.443,27.628)
O5': (50.342,125.705,22.896)
C3': (52.135,128.017,23.478)
C1': (51.236,128.048,25.665)
O4': (50.165,127.839,24.755)
C5': (49.980,127.042,22.478)
P: (49.563,124.421,22.357)
O2: (52.375,127.856,28.166)
C4': (50.618,128.069,23.393)
C2': (52.413,128.603,24.857)
O2': (52.376,130.015,24.870)
N1: (51.524,126.765,26.343)
N3: (52.354,125.594,28.241)
N4: (52.324,123.303,28.267)
C6: (51.229,125.577,25.731)
C5: (51.476,124.408,26.331)
O3': (52.745,128.778,22.437)
OP1: (49.533,124.477,20.881)
OP2: (50.132,123.226,23.029)
C4: (52.058,124.443,27.628)
O5': (50.342,125.705,22.896)
C3': (52.135,128.017,23.478)
C1': (51.236,128.048,25.665)
O4': (50.165,127.839,24.755)
C5': (49.980,127.042,22.478)
P: (49.563,124.421,22.357)
O2: (52.375,127.856,28.166)
C4': (50.618,128.069,23.393)
C2': (52.413,128.603,24.857)
O2': (52.376,130.015,24.870)
N1: (51.524,126.765,26.343)
N3: (52.354,125.594,28.241)
N4: (52.324,123.303,28.267)
C6: (51.229,125.577,25.731)
C5: (51.476,124.408,26.331)
O3': (52.745,128.778,22.437)
OP1: (55.197,122.379,40.088)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
Image (generated by PyMOL):