Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X52:X53
Extra
PDB:
ATOM 1 O3' U A 51 -18.883 61.228 5.977 1.00 54.16 O
ATOM 2 P C A 52 -18.406 62.550 6.762 1.00 54.94 P
ATOM 3 OP1 C A 52 -19.345 63.620 6.356 1.00 54.74 O
ATOM 4 OP2 C A 52 -16.950 62.761 6.569 1.00 54.81 O
ATOM 5 O5' C A 52 -18.708 62.205 8.299 1.00 54.47 O
ATOM 6 C5' C A 52 -18.058 62.923 9.353 1.00 53.92 C
ATOM 7 C4' C A 52 -18.416 62.357 10.722 1.00 54.04 C
ATOM 8 O4' C A 52 -19.859 62.280 10.870 1.00 53.23 O
ATOM 9 C3' C A 52 -17.875 60.959 11.016 1.00 54.42 C
ATOM 10 O3' C A 52 -17.334 60.893 12.337 1.00 55.61 O
ATOM 11 C2' C A 52 -19.095 60.051 10.870 1.00 53.75 C
ATOM 12 O2' C A 52 -19.054 58.929 11.729 1.00 53.60 O
ATOM 13 C1' C A 52 -20.248 60.977 11.252 1.00 53.02 C
ATOM 14 N1 C A 52 -21.518 60.611 10.550 1.00 52.51 N
ATOM 15 C2 C A 52 -22.576 60.028 11.268 1.00 52.25 C
ATOM 16 O2 C A 52 -22.465 59.829 12.485 1.00 51.77 O
ATOM 17 N3 C A 52 -23.712 59.695 10.598 1.00 52.48 N
ATOM 18 C4 C A 52 -23.813 59.919 9.281 1.00 52.45 C
ATOM 19 N4 C A 52 -24.952 59.576 8.669 1.00 52.76 N
ATOM 20 C5 C A 52 -22.749 60.509 8.535 1.00 52.33 C
ATOM 21 C6 C A 52 -21.635 60.831 9.202 1.00 52.25 C
ATOM 22 P G A 53 -15.756 60.775 12.600 1.00 56.48 P
ATOM 23 OP1 G A 53 -15.593 60.377 14.018 1.00 56.36 O
ATOM 24 OP2 G A 53 -15.106 62.010 12.097 1.00 56.40 O
ATOM 25 O5' G A 53 -15.286 59.569 11.653 1.00 56.38 O
TER
ATOM 1 O3' C B 52 -17.334 60.893 12.337 1.00 55.61 O
ATOM 2 P G B 53 -15.756 60.775 12.600 1.00 56.48 P
ATOM 3 OP1 G B 53 -15.593 60.377 14.018 1.00 56.36 O
ATOM 4 OP2 G B 53 -15.106 62.010 12.097 1.00 56.40 O
ATOM 5 O5' G B 53 -15.286 59.569 11.653 1.00 56.38 O
ATOM 6 C5' G B 53 -15.708 58.229 11.903 1.00 56.46 C
ATOM 7 C4' G B 53 -15.043 57.261 10.943 1.00 56.32 C
ATOM 8 O4' G B 53 -15.361 57.597 9.563 1.00 56.32 O
ATOM 9 C3' G B 53 -13.521 57.250 10.968 1.00 56.23 C
ATOM 10 O3' G B 53 -13.010 56.503 12.075 1.00 56.03 O
ATOM 11 C2' G B 53 -13.245 56.577 9.630 1.00 56.01 C
ATOM 12 O2' G B 53 -13.504 55.184 9.664 1.00 56.06 O
ATOM 13 C1' G B 53 -14.241 57.314 8.733 1.00 55.73 C
ATOM 14 N9 G B 53 -13.686 58.556 8.186 1.00 55.25 N
ATOM 15 C8 G B 53 -14.028 59.839 8.542 1.00 55.04 C
ATOM 16 N7 G B 53 -13.363 60.762 7.907 1.00 55.03 N
ATOM 17 C5 G B 53 -12.515 60.051 7.069 1.00 55.16 C
ATOM 18 C6 G B 53 -11.549 60.519 6.137 1.00 55.17 C
ATOM 19 O6 G B 53 -11.255 61.692 5.867 1.00 55.23 O
ATOM 20 N1 G B 53 -10.893 59.472 5.483 1.00 54.99 N
ATOM 21 C2 G B 53 -11.143 58.134 5.704 1.00 54.89 C
ATOM 22 N2 G B 53 -10.416 57.266 4.984 1.00 54.60 N
ATOM 23 N3 G B 53 -12.046 57.684 6.577 1.00 54.82 N
ATOM 24 C4 G B 53 -12.698 58.690 7.227 1.00 55.19 C
ATOM 25 P G B 54 -11.672 56.979 12.823 1.00 55.71 P
ATOM 26 OP1 G B 54 -11.500 56.085 13.987 1.00 55.53 O
ATOM 27 OP2 G B 54 -11.727 58.445 13.024 1.00 55.65 O
ATOM 28 O5' G B 54 -10.510 56.703 11.755 1.00 55.63 O
TER
ATOM 2 P C A 52 -18.406 62.550 6.762 1.00 54.94 P
ATOM 3 OP1 C A 52 -19.345 63.620 6.356 1.00 54.74 O
ATOM 4 OP2 C A 52 -16.950 62.761 6.569 1.00 54.81 O
ATOM 5 O5' C A 52 -18.708 62.205 8.299 1.00 54.47 O
ATOM 6 C5' C A 52 -18.058 62.923 9.353 1.00 53.92 C
ATOM 7 C4' C A 52 -18.416 62.357 10.722 1.00 54.04 C
ATOM 8 O4' C A 52 -19.859 62.280 10.870 1.00 53.23 O
ATOM 9 C3' C A 52 -17.875 60.959 11.016 1.00 54.42 C
ATOM 10 O3' C A 52 -17.334 60.893 12.337 1.00 55.61 O
ATOM 11 C2' C A 52 -19.095 60.051 10.870 1.00 53.75 C
ATOM 12 O2' C A 52 -19.054 58.929 11.729 1.00 53.60 O
ATOM 13 C1' C A 52 -20.248 60.977 11.252 1.00 53.02 C
ATOM 14 N1 C A 52 -21.518 60.611 10.550 1.00 52.51 N
ATOM 15 C2 C A 52 -22.576 60.028 11.268 1.00 52.25 C
ATOM 16 O2 C A 52 -22.465 59.829 12.485 1.00 51.77 O
ATOM 17 N3 C A 52 -23.712 59.695 10.598 1.00 52.48 N
ATOM 18 C4 C A 52 -23.813 59.919 9.281 1.00 52.45 C
ATOM 19 N4 C A 52 -24.952 59.576 8.669 1.00 52.76 N
ATOM 20 C5 C A 52 -22.749 60.509 8.535 1.00 52.33 C
ATOM 21 C6 C A 52 -21.635 60.831 9.202 1.00 52.25 C
ATOM 22 P G A 53 -15.756 60.775 12.600 1.00 56.48 P
ATOM 23 OP1 G A 53 -15.593 60.377 14.018 1.00 56.36 O
ATOM 24 OP2 G A 53 -15.106 62.010 12.097 1.00 56.40 O
ATOM 25 O5' G A 53 -15.286 59.569 11.653 1.00 56.38 O
TER
ATOM 1 O3' C B 52 -17.334 60.893 12.337 1.00 55.61 O
ATOM 2 P G B 53 -15.756 60.775 12.600 1.00 56.48 P
ATOM 3 OP1 G B 53 -15.593 60.377 14.018 1.00 56.36 O
ATOM 4 OP2 G B 53 -15.106 62.010 12.097 1.00 56.40 O
ATOM 5 O5' G B 53 -15.286 59.569 11.653 1.00 56.38 O
ATOM 6 C5' G B 53 -15.708 58.229 11.903 1.00 56.46 C
ATOM 7 C4' G B 53 -15.043 57.261 10.943 1.00 56.32 C
ATOM 8 O4' G B 53 -15.361 57.597 9.563 1.00 56.32 O
ATOM 9 C3' G B 53 -13.521 57.250 10.968 1.00 56.23 C
ATOM 10 O3' G B 53 -13.010 56.503 12.075 1.00 56.03 O
ATOM 11 C2' G B 53 -13.245 56.577 9.630 1.00 56.01 C
ATOM 12 O2' G B 53 -13.504 55.184 9.664 1.00 56.06 O
ATOM 13 C1' G B 53 -14.241 57.314 8.733 1.00 55.73 C
ATOM 14 N9 G B 53 -13.686 58.556 8.186 1.00 55.25 N
ATOM 15 C8 G B 53 -14.028 59.839 8.542 1.00 55.04 C
ATOM 16 N7 G B 53 -13.363 60.762 7.907 1.00 55.03 N
ATOM 17 C5 G B 53 -12.515 60.051 7.069 1.00 55.16 C
ATOM 18 C6 G B 53 -11.549 60.519 6.137 1.00 55.17 C
ATOM 19 O6 G B 53 -11.255 61.692 5.867 1.00 55.23 O
ATOM 20 N1 G B 53 -10.893 59.472 5.483 1.00 54.99 N
ATOM 21 C2 G B 53 -11.143 58.134 5.704 1.00 54.89 C
ATOM 22 N2 G B 53 -10.416 57.266 4.984 1.00 54.60 N
ATOM 23 N3 G B 53 -12.046 57.684 6.577 1.00 54.82 N
ATOM 24 C4 G B 53 -12.698 58.690 7.227 1.00 55.19 C
ATOM 25 P G B 54 -11.672 56.979 12.823 1.00 55.71 P
ATOM 26 OP1 G B 54 -11.500 56.085 13.987 1.00 55.53 O
ATOM 27 OP2 G B 54 -11.727 58.445 13.024 1.00 55.65 O
ATOM 28 O5' G B 54 -10.510 56.703 11.755 1.00 55.63 O
TER
Atoms:
C2: (-22.576,60.028,11.268)
OP1: (-19.345,63.620,6.356)
OP2: (-16.950,62.761,6.569)
C4: (-23.813,59.919,9.281)
O5': (-18.708,62.205,8.299)
C3': (-17.875,60.959,11.016)
C1': (-20.248,60.977,11.252)
O4': (-19.859,62.280,10.870)
C5': (-18.058,62.923,9.353)
P: (-18.406,62.550,6.762)
O2: (-22.465,59.829,12.485)
C4': (-18.416,62.357,10.722)
C2': (-19.095,60.051,10.870)
O2': (-19.054,58.929,11.729)
N1: (-21.518,60.611,10.550)
N3: (-23.712,59.695,10.598)
N4: (-24.952,59.576,8.669)
C6: (-21.635,60.831,9.202)
C5: (-22.749,60.509,8.535)
O3': (-17.334,60.893,12.337)
OP1: (-19.345,63.620,6.356)
OP2: (-16.950,62.761,6.569)
C4: (-23.813,59.919,9.281)
O5': (-18.708,62.205,8.299)
C3': (-17.875,60.959,11.016)
C1': (-20.248,60.977,11.252)
O4': (-19.859,62.280,10.870)
C5': (-18.058,62.923,9.353)
P: (-18.406,62.550,6.762)
O2: (-22.465,59.829,12.485)
C4': (-18.416,62.357,10.722)
C2': (-19.095,60.051,10.870)
O2': (-19.054,58.929,11.729)
N1: (-21.518,60.611,10.550)
N3: (-23.712,59.695,10.598)
N4: (-24.952,59.576,8.669)
C6: (-21.635,60.831,9.202)
C5: (-22.749,60.509,8.535)
O3': (-17.334,60.893,12.337)
OP1: (-15.593,60.377,14.018)
OP2: (-15.106,62.010,12.097)
C3': (-13.521,57.250,10.968)
C1': (-14.241,57.314,8.733)
C5': (-15.708,58.229,11.903)
O6: (-11.255,61.692,5.867)
O4': (-15.361,57.597,9.563)
C8: (-14.028,59.839,8.542)
C2: (-11.143,58.134,5.704)
C6: (-11.549,60.519,6.137)
C5: (-12.515,60.051,7.069)
C4: (-12.698,58.690,7.227)
P: (-15.756,60.775,12.600)
C4': (-15.043,57.261,10.943)
C2': (-13.245,56.577,9.630)
O2': (-13.504,55.184,9.664)
N1: (-10.893,59.472,5.483)
N2: (-10.416,57.266,4.984)
N3: (-12.046,57.684,6.577)
N7: (-13.363,60.762,7.907)
N9: (-13.686,58.556,8.186)
O5': (-15.286,59.569,11.653)
O3': (-13.010,56.503,12.075)
OP2: (-15.106,62.010,12.097)
C3': (-13.521,57.250,10.968)
C1': (-14.241,57.314,8.733)
C5': (-15.708,58.229,11.903)
O6: (-11.255,61.692,5.867)
O4': (-15.361,57.597,9.563)
C8: (-14.028,59.839,8.542)
C2: (-11.143,58.134,5.704)
C6: (-11.549,60.519,6.137)
C5: (-12.515,60.051,7.069)
C4: (-12.698,58.690,7.227)
P: (-15.756,60.775,12.600)
C4': (-15.043,57.261,10.943)
C2': (-13.245,56.577,9.630)
O2': (-13.504,55.184,9.664)
N1: (-10.893,59.472,5.483)
N2: (-10.416,57.266,4.984)
N3: (-12.046,57.684,6.577)
N7: (-13.363,60.762,7.907)
N9: (-13.686,58.556,8.186)
O5': (-15.286,59.569,11.653)
O3': (-13.010,56.503,12.075)
Image (generated by PyMOL):