Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A52:A53
Extra
PDB:
ATOM 1 O3' U A 51 -17.951 62.260 6.039 1.00 44.61 O
ATOM 2 P C A 52 -17.207 63.406 6.890 1.00 44.30 P
ATOM 3 OP1 C A 52 -17.969 64.648 6.634 1.00 44.32 O
ATOM 4 OP2 C A 52 -15.752 63.373 6.618 1.00 44.05 O
ATOM 5 O5' C A 52 -17.460 63.029 8.421 1.00 43.71 O
ATOM 6 C5' C A 52 -16.871 63.824 9.448 1.00 42.87 C
ATOM 7 C4' C A 52 -17.241 63.297 10.822 1.00 42.34 C
ATOM 8 O4' C A 52 -18.679 63.224 10.975 1.00 42.19 O
ATOM 9 C3' C A 52 -16.731 61.898 11.123 1.00 42.37 C
ATOM 10 O3' C A 52 -16.223 61.879 12.437 1.00 42.80 O
ATOM 11 C2' C A 52 -17.958 61.004 11.003 1.00 42.15 C
ATOM 12 O2' C A 52 -17.889 59.858 11.831 1.00 42.14 O
ATOM 13 C1' C A 52 -19.045 61.956 11.476 1.00 41.94 C
ATOM 14 N1 C A 52 -20.378 61.591 10.937 1.00 41.71 N
ATOM 15 C2 C A 52 -21.266 60.839 11.723 1.00 41.32 C
ATOM 16 O2 C A 52 -20.941 60.490 12.864 1.00 40.53 O
ATOM 17 N3 C A 52 -22.475 60.515 11.200 1.00 41.52 N
ATOM 18 C4 C A 52 -22.795 60.907 9.960 1.00 41.73 C
ATOM 19 N4 C A 52 -23.997 60.565 9.487 1.00 42.12 N
ATOM 20 C5 C A 52 -21.905 61.670 9.142 1.00 41.57 C
ATOM 21 C6 C A 52 -20.719 61.984 9.668 1.00 41.74 C
ATOM 22 P G A 53 -14.644 61.926 12.647 1.00 43.03 P
ATOM 23 OP1 G A 53 -14.380 61.630 14.076 1.00 42.62 O
ATOM 24 OP2 G A 53 -14.151 63.187 12.034 1.00 43.06 O
ATOM 25 O5' G A 53 -14.131 60.707 11.741 1.00 42.40 O
TER
ATOM 1 O3' C B 52 -16.223 61.879 12.437 1.00 42.80 O
ATOM 2 P G B 53 -14.644 61.926 12.647 1.00 43.03 P
ATOM 3 OP1 G B 53 -14.380 61.630 14.076 1.00 42.62 O
ATOM 4 OP2 G B 53 -14.151 63.187 12.034 1.00 43.06 O
ATOM 5 O5' G B 53 -14.131 60.707 11.741 1.00 42.40 O
ATOM 6 C5' G B 53 -14.484 59.357 12.053 1.00 41.20 C
ATOM 7 C4' G B 53 -14.043 58.395 10.963 1.00 40.01 C
ATOM 8 O4' G B 53 -14.437 58.870 9.646 1.00 40.05 O
ATOM 9 C3' G B 53 -12.541 58.196 10.844 1.00 38.97 C
ATOM 10 O3' G B 53 -12.084 57.297 11.827 1.00 38.33 O
ATOM 11 C2' G B 53 -12.463 57.586 9.455 1.00 39.07 C
ATOM 12 O2' G B 53 -12.859 56.226 9.438 1.00 38.49 O
ATOM 13 C1' G B 53 -13.452 58.481 8.699 1.00 39.69 C
ATOM 14 N9 G B 53 -12.807 59.676 8.144 1.00 39.49 N
ATOM 15 C8 G B 53 -13.064 60.983 8.488 1.00 39.12 C
ATOM 16 N7 G B 53 -12.328 61.846 7.848 1.00 39.50 N
ATOM 17 C5 G B 53 -11.526 61.067 7.023 1.00 39.65 C
ATOM 18 C6 G B 53 -10.522 61.446 6.094 1.00 39.71 C
ATOM 19 O6 G B 53 -10.142 62.589 5.809 1.00 40.14 O
ATOM 20 N1 G B 53 -9.937 60.349 5.457 1.00 39.57 N
ATOM 21 C2 G B 53 -10.277 59.037 5.687 1.00 39.10 C
ATOM 22 N2 G B 53 -9.611 58.110 4.984 1.00 38.30 N
ATOM 23 N3 G B 53 -11.212 58.670 6.557 1.00 39.76 N
ATOM 24 C4 G B 53 -11.802 59.727 7.192 1.00 39.72 C
ATOM 25 P G B 54 -10.785 57.643 12.691 1.00 38.00 P
ATOM 26 OP1 G B 54 -10.683 56.616 13.747 1.00 38.18 O
ATOM 27 OP2 G B 54 -10.827 59.076 13.061 1.00 38.53 O
ATOM 28 O5' G B 54 -9.579 57.443 11.666 1.00 38.18 O
TER
ATOM 2 P C A 52 -17.207 63.406 6.890 1.00 44.30 P
ATOM 3 OP1 C A 52 -17.969 64.648 6.634 1.00 44.32 O
ATOM 4 OP2 C A 52 -15.752 63.373 6.618 1.00 44.05 O
ATOM 5 O5' C A 52 -17.460 63.029 8.421 1.00 43.71 O
ATOM 6 C5' C A 52 -16.871 63.824 9.448 1.00 42.87 C
ATOM 7 C4' C A 52 -17.241 63.297 10.822 1.00 42.34 C
ATOM 8 O4' C A 52 -18.679 63.224 10.975 1.00 42.19 O
ATOM 9 C3' C A 52 -16.731 61.898 11.123 1.00 42.37 C
ATOM 10 O3' C A 52 -16.223 61.879 12.437 1.00 42.80 O
ATOM 11 C2' C A 52 -17.958 61.004 11.003 1.00 42.15 C
ATOM 12 O2' C A 52 -17.889 59.858 11.831 1.00 42.14 O
ATOM 13 C1' C A 52 -19.045 61.956 11.476 1.00 41.94 C
ATOM 14 N1 C A 52 -20.378 61.591 10.937 1.00 41.71 N
ATOM 15 C2 C A 52 -21.266 60.839 11.723 1.00 41.32 C
ATOM 16 O2 C A 52 -20.941 60.490 12.864 1.00 40.53 O
ATOM 17 N3 C A 52 -22.475 60.515 11.200 1.00 41.52 N
ATOM 18 C4 C A 52 -22.795 60.907 9.960 1.00 41.73 C
ATOM 19 N4 C A 52 -23.997 60.565 9.487 1.00 42.12 N
ATOM 20 C5 C A 52 -21.905 61.670 9.142 1.00 41.57 C
ATOM 21 C6 C A 52 -20.719 61.984 9.668 1.00 41.74 C
ATOM 22 P G A 53 -14.644 61.926 12.647 1.00 43.03 P
ATOM 23 OP1 G A 53 -14.380 61.630 14.076 1.00 42.62 O
ATOM 24 OP2 G A 53 -14.151 63.187 12.034 1.00 43.06 O
ATOM 25 O5' G A 53 -14.131 60.707 11.741 1.00 42.40 O
TER
ATOM 1 O3' C B 52 -16.223 61.879 12.437 1.00 42.80 O
ATOM 2 P G B 53 -14.644 61.926 12.647 1.00 43.03 P
ATOM 3 OP1 G B 53 -14.380 61.630 14.076 1.00 42.62 O
ATOM 4 OP2 G B 53 -14.151 63.187 12.034 1.00 43.06 O
ATOM 5 O5' G B 53 -14.131 60.707 11.741 1.00 42.40 O
ATOM 6 C5' G B 53 -14.484 59.357 12.053 1.00 41.20 C
ATOM 7 C4' G B 53 -14.043 58.395 10.963 1.00 40.01 C
ATOM 8 O4' G B 53 -14.437 58.870 9.646 1.00 40.05 O
ATOM 9 C3' G B 53 -12.541 58.196 10.844 1.00 38.97 C
ATOM 10 O3' G B 53 -12.084 57.297 11.827 1.00 38.33 O
ATOM 11 C2' G B 53 -12.463 57.586 9.455 1.00 39.07 C
ATOM 12 O2' G B 53 -12.859 56.226 9.438 1.00 38.49 O
ATOM 13 C1' G B 53 -13.452 58.481 8.699 1.00 39.69 C
ATOM 14 N9 G B 53 -12.807 59.676 8.144 1.00 39.49 N
ATOM 15 C8 G B 53 -13.064 60.983 8.488 1.00 39.12 C
ATOM 16 N7 G B 53 -12.328 61.846 7.848 1.00 39.50 N
ATOM 17 C5 G B 53 -11.526 61.067 7.023 1.00 39.65 C
ATOM 18 C6 G B 53 -10.522 61.446 6.094 1.00 39.71 C
ATOM 19 O6 G B 53 -10.142 62.589 5.809 1.00 40.14 O
ATOM 20 N1 G B 53 -9.937 60.349 5.457 1.00 39.57 N
ATOM 21 C2 G B 53 -10.277 59.037 5.687 1.00 39.10 C
ATOM 22 N2 G B 53 -9.611 58.110 4.984 1.00 38.30 N
ATOM 23 N3 G B 53 -11.212 58.670 6.557 1.00 39.76 N
ATOM 24 C4 G B 53 -11.802 59.727 7.192 1.00 39.72 C
ATOM 25 P G B 54 -10.785 57.643 12.691 1.00 38.00 P
ATOM 26 OP1 G B 54 -10.683 56.616 13.747 1.00 38.18 O
ATOM 27 OP2 G B 54 -10.827 59.076 13.061 1.00 38.53 O
ATOM 28 O5' G B 54 -9.579 57.443 11.666 1.00 38.18 O
TER
Atoms:
C2: (-21.266,60.839,11.723)
OP1: (-17.969,64.648,6.634)
OP2: (-15.752,63.373,6.618)
C4: (-22.795,60.907,9.960)
O5': (-17.460,63.029,8.421)
C3': (-16.731,61.898,11.123)
C1': (-19.045,61.956,11.476)
O4': (-18.679,63.224,10.975)
C5': (-16.871,63.824,9.448)
P: (-17.207,63.406,6.890)
O2: (-20.941,60.490,12.864)
C4': (-17.241,63.297,10.822)
C2': (-17.958,61.004,11.003)
O2': (-17.889,59.858,11.831)
N1: (-20.378,61.591,10.937)
N3: (-22.475,60.515,11.200)
N4: (-23.997,60.565,9.487)
C6: (-20.719,61.984,9.668)
C5: (-21.905,61.670,9.142)
O3': (-16.223,61.879,12.437)
OP1: (-17.969,64.648,6.634)
OP2: (-15.752,63.373,6.618)
C4: (-22.795,60.907,9.960)
O5': (-17.460,63.029,8.421)
C3': (-16.731,61.898,11.123)
C1': (-19.045,61.956,11.476)
O4': (-18.679,63.224,10.975)
C5': (-16.871,63.824,9.448)
P: (-17.207,63.406,6.890)
O2: (-20.941,60.490,12.864)
C4': (-17.241,63.297,10.822)
C2': (-17.958,61.004,11.003)
O2': (-17.889,59.858,11.831)
N1: (-20.378,61.591,10.937)
N3: (-22.475,60.515,11.200)
N4: (-23.997,60.565,9.487)
C6: (-20.719,61.984,9.668)
C5: (-21.905,61.670,9.142)
O3': (-16.223,61.879,12.437)
OP1: (-14.380,61.630,14.076)
OP2: (-14.151,63.187,12.034)
C3': (-12.541,58.196,10.844)
C1': (-13.452,58.481,8.699)
C5': (-14.484,59.357,12.053)
O6: (-10.142,62.589,5.809)
O4': (-14.437,58.870,9.646)
C8: (-13.064,60.983,8.488)
C2: (-10.277,59.037,5.687)
C6: (-10.522,61.446,6.094)
C5: (-11.526,61.067,7.023)
C4: (-11.802,59.727,7.192)
P: (-14.644,61.926,12.647)
C4': (-14.043,58.395,10.963)
C2': (-12.463,57.586,9.455)
O2': (-12.859,56.226,9.438)
N1: (-9.937,60.349,5.457)
N2: (-9.611,58.110,4.984)
N3: (-11.212,58.670,6.557)
N7: (-12.328,61.846,7.848)
N9: (-12.807,59.676,8.144)
O5': (-14.131,60.707,11.741)
O3': (-12.084,57.297,11.827)
OP2: (-14.151,63.187,12.034)
C3': (-12.541,58.196,10.844)
C1': (-13.452,58.481,8.699)
C5': (-14.484,59.357,12.053)
O6: (-10.142,62.589,5.809)
O4': (-14.437,58.870,9.646)
C8: (-13.064,60.983,8.488)
C2: (-10.277,59.037,5.687)
C6: (-10.522,61.446,6.094)
C5: (-11.526,61.067,7.023)
C4: (-11.802,59.727,7.192)
P: (-14.644,61.926,12.647)
C4': (-14.043,58.395,10.963)
C2': (-12.463,57.586,9.455)
O2': (-12.859,56.226,9.438)
N1: (-9.937,60.349,5.457)
N2: (-9.611,58.110,4.984)
N3: (-11.212,58.670,6.557)
N7: (-12.328,61.846,7.848)
N9: (-12.807,59.676,8.144)
O5': (-14.131,60.707,11.741)
O3': (-12.084,57.297,11.827)
Image (generated by PyMOL):